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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
----------->
GT1
--------->
ANAC58
--------->
AHL20(2)
--------->
ANAC58
<---------
AHL20(2)
--------->
WOX13(1)
<---------
AHL20(2)
---
--------
CCA1(2)
<---------
GLK1(1)
--------->
AHL20(2)
<----
>
MYB83
--------->
GLK1(1)
<---------
MYB52(1)
<-----
>
MYB46(1)
------->
GAMYB
--------->
AHL20(2)
<-------
GAMYB
<--------
-
GT1
----------->
RAV1(1)
<-----------
GT1
<---------
MYB46(3)
---------->
DOF2
catctctctcttccaacagaaatccat
caagaaaataacttcttcttggttctctctcttggctgttatctatatatatatagagagaaagagacttttg
8938300
----------->
HVH21
<---------
MYB46(3)
--------->
ALFIN1
<---------
ANAC46
<---------
AtMYB61
<---------
MYB46(3)
<---------
AtMYB61
--------->
ANAC55(2)
<---------
DEAR3(1)
<---------
ANAC55(2)
--------->
ALFIN1
<---------------
AtSPL8
<---------
MYB46(3)
<---------
ICU4
<---------
DEAR3(1)
<---------------
AtSPL3
<---------
AtMYB61
--------->
ICU4
--------->
ALFIN1
-------->
GT1
<---------
HSFB2a(2)
<---------
MYB46(3)
-----
ANAC46
<---------
ARR14(2)
--------->
ALFIN1
--------
----
AtMYB61
<---------
MYB46(3)
<---------
AtMYB61
<------
ZmHOX2a(1)
--
DOF2
<-------
TEIL
--------->
ARR14(2)
<---------
ZAT6
--------->
ZAT6
---------->
DOF2
gtgtaataagtacgtattggttaagagaatacgagaagggtttgtagtatagaagtagtggtggtggtggtgacactaattaagaacaaaggacagaaag
8938400
--------->
ANAC55(2)
--------->
DAG2
--------->
YAB1
----------->
GT1
--------->
At5g28300
<---------
ANAC55(2)
<-------
MYC3
----------->
GT1
--------->
MYB59
<---------
YAB1
-->
DOF2
------->
MYC3
---------->
DOF2
---------->
DOF2
---------->
DOF2
aacaatttgacattgatggcatatggagtaagtaaaaaaaaaaagagagatggtaaaaaaaaaagttttagttaagtaaaagtatttataatggattttt
8938500
------>
ZmHOX2a(2)
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
<------
ZmHOX2a(2)
------------------------>
ANAC81
--------->
ARR11(3)
---------->
DOF2
<---------
ARR11(3)
<---------
ARR14(2)
------->
TEIL
--------->
AGP1
<---------
ARR11(3)
<---------
ARR14(2)
--------->
ARR11(3)
---------->
DOF2
<---------
TOE2(3)
<---------
At4g35610
<---------
GLK1(1)
<---------
GLK1(2)
---------->
DOF2
--------->
ARR14(2)
---------->
DOF2
----------->
GT1
--------->
ARR14(2)
<---------
TOE1(3)
--------->
At4g35610
--------->
GLK1(1)
tgaagagaaatattctctaaagatcggaatcaaagaggttagggtttggattgaatctgctgaaaaggagggagagaaagagagagatcttatccaaatg
8938600
<---------
YAB1
<------
ZmHOX2a(1)
--------->
GLK1(1)
<---------
ANAC46
--------->
LBD16
<---------
LBD16
---------->
DOF2
--------->
CCA1(2)
<---------
LBD16
--------->
MYB52(1)
<---------
ZAT14
--------->
CCA1(2)
<---------
ZAT6
*
TSS
--------->
ZAT14
--------
agaagaatgagtaaagagagtgagagagataagcgttgtgtttgtgttttgatgagagtgtaaaccgga
ggatgatcagagaactacgggtctcttaaat
8938700
<---------
YAB1
--------->
YAB1
-------->
HAHB4
--------->
ICU4
<---------
ANAC46
<---------
ICU4
<---------
WOX13(1)
--------->
YAB1
<------------
CBF
<---------
YAB1
--------->
ATHB12
--------->
AHL20(2)
---------->
DOF2
--------->
MYB52(2)
<---------
YAB1
<---------
AHL20(2)
--------->
AtLEC2
<------------
CBF
--------->
TGA1a
--------->
AHL20(2)
-->
DOF2
<------
ZmHOX2a(1)
<---------
MYB52(1)
<---------
TGA1a
<---------
AHL20(2)
cgccattcaaacttataggaaagagagagagagattgttagttttgatgtgactatctctcatgtgtgattgattatgtgtatttatataattatgagtg
8938800
<---------
AHL20(2)
--------->
AHL20(2)
<---------
ARR11(3)
<---------
AHL20(2)
<-----------
GT1
--------->
AHL20(1)
<---------
GLK1(1)
<---------
AHL20(2)
--------->
AHL20(2)
<---------
DAG2
--------->
ARR11(3)
--------->
AHL20(2)
----------->
GT1
<---------
GLK1(1)
----------->
RAV1(2)
<----
<---------
ARR11(3)
<---------
TOE2(3)
--------->
GLK1(1)
<---------
ALFIN1
-----
--------->
AHL20(1)
----------->
GT1
<---------
AHL20(1)
<----------
DOF2
<---------
GLK1(2)
tgtatatattatatatgtgtgaaaaatggttaagaaagtttatatatttaatggagttcccttttgaatttcccacctgtaagattttggtgttccacta
8938900
--------->
GLK1(1)
<---------
HSFB2a(2)
<---------
YAB1
--------->
MYB52(1)
--------->
TOE2(3)
<---------
TOE2(3)
--------->
MYB46(3)
<---------
DAG2
<---------
WOX13(1)
-------->
P
<----------
DOF2
<---------
GLK1(1)
<---------
AHL20(1)
<<<<<<<<<<<<<<<<<
LFY
<-----------
GT1
--------->
HSFB2a(2)
<---------
REM1(1)
--------->
YAB1
-----
ZAT14
<-----------
GT1
--------->
ATHB12
--------->
AHL20(1)
--------->
WOX13(1)
---->
ZAT14
<----------
DOF2
--------->
TOE2(3)
--------->
ICU4
<---------
YAB1
<------
NtERF2
<--
tacttttgactctttctttaccttatggaaatctcaaagattgatgtaagtaatatttttgttttcttatgatcaaccaatggctgcatactatgagttt
8939000
----------->
GT1
--------->
AHL20(2)
----------->
GT1
<---------
AHL20(2)
<---------
At4g35610
---------
--------->
AHL20(2)
--------->
At4g35610
<---------
LBD16
<---------
AHL20(2)
<---------
AHL20(2)
<-----------
RAV1(2)
--------->
MYB52(1)
-------
YAB1
<---------
ZAT14
--------->
AHL20(2)
<-----------
HVH21
---------->
DOF2
-
atttttaattaatatgagtttagtaaatagagtagattaattgtatatttttctaggtatgtcagatgaatagctaaatagccgaatagcggaataactg
8939100
<---------
YAB1
--------->
YAB1
--------->
AHL20(2)
--------->
ICU4
<---------
YAB1
<---------
ICU4
--------->
YAB1
--------->
AHL20(2)
<---------
AHL20(2)
<---------
ATHB51
--------->
ICU4
<-----------
GT1
<---------
AHL20(1)
<---------
KAN4(2)
--------->
YAB1
--------->
YAB1
----------->
GT1
--------------->
AGL15
--------->
At4g35610
<---------
ANAC58
<---------
ARR11(3)
<---------
ICU4
--------->
ICU4
<---------
ANAC58
--------->
ARR11(3)
--------->
YAB1
>
MYB52(1)
<---------
ANAC55(2)
--------->
GLK1(2)
--------->
KAN4(1)
---------->
GT1
<---------
ANAC46
--------->
ZAT6
<---------
ZAT6
--------->
YAB1
aatagttattagctaaacgaattgaactagagaatagtttcgtaaaataattataaaacactaaaaatctagttttagtagaataatcacattttgtttt
8939200
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AGI:
At5g25620.1
Description:
YUC6 (YUCCA6); monooxygenase. similar to YUC2 (YUCCA2), FAD binding / NADP binding / flavin-containing monooxygenase/ oxidoreductase [Arabidopsis thaliana] (TAIR:AT4G13260.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44076.1); contains InterPro domain FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027); contains InterPro domain Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region; (InterPro:IPR001327); contains InterPro domain Pyridine nucleotide-disulphide oxidoreductase, class-II; (InterPro:IPR000103); contains InterPro domain Monooxygenase, FAD-binding; (InterPro:IPR002938)
Range:
from: 8935112
to: 8938669
Orientation: Reverse
Links:
TAIR
MIPS
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publications
when using AthaMap.
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