Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                        --------->HSFB2a(2)                                                                      <---------HSFB2a(2)                                                                     <---------LBD16                                                                   --------->ARR14(2)                                                                   <---------ARR14(2)                                                                   --------->GLK1(2)                                                                  ------>MYB46(1)                                                                  ------>MYB83                                                                --------------->AGL15                                                                <---------------AGL15                                                               ----------------->AGL1                                                               ----------------->AG                                                               ----------------->AGL2                  ----------->GT1                              <-----------------AGL2    --------->MYB52(1)   ------>ZmHOX2a(1)----------->GT1                     ---------->DOF2       <------ZmHOX2a(1)   cattcctagagagagagagagagagaaaaaaaaaactgaagctagagagtttttcaaaaaaagaaaccaaatctggaagaggaagaacaaaaaacagagt  8884700                                                                                             <-------                                                                                            <--------                                                                                           <---------AHL20(2)                                                                                         <---------YAB1                                                                                        --------->AHL20(1)                        <---------MYB52(1)                                             --------->AHL20(2)                  --------->ATHB12                                                     <---------AHL20(2)                 <---------YAB1                                                       <---------AHL20(2)              <---------AHL20(2)                                ---------->DOF2  <------ZmHOX2a(1)  <             --------->AHL20(2)        --------->ATHB12 <---------GLK1(1)     <---------AtLEC2  <----   ttggattttgagaaattttatgattcgttacggtgttttcttcattgtttttttttagatttctgagaaagaagaaatttgcaggaaaattattttaact  8884800      --------->AHL20(2)<---------DAG2      <---------AHL20(2)<----------DOF2     --------->YAB1  <-----------GT1              <---------ANAC58 ------>ZmHOX2a(1)   ---------->ID1  *TSS         <---------ANAC58 ----GT1<------------------------ANAC81        <---------ARR14(2)              <---------ICU4 ---GT1<---------AHL20(2)       <---------HSFB2a(2)                           --------->ICU4      --- ---------MYB59     <-----------GT1 ---------->DOF2                          <---------AHL20(2)   --- ------DOF2    ---------->ID1   --------->HSFB2a(2)                    --------->AHL20(2) --------->ARR11(3)   ttcctaattttaattttgtttttttcctttttgtctcgaaaagacagcgttttcgtttcagttttatttccgataatataaaaattagaaaacatctcgc  8884900                                             ------>MYB83                                             ------>MYB46(1)                                             -------->P                                       --------->GLK1(1)         <-----------GT1           --------->ANAC55(2)       <---------YAB1              ----------->GT1                                  <------MYB83     -------->ATHB1                --------->ANAC55(1)                              <------MYB46(1)     <---------ICU4                <---------ANAC55(2)                             --------->MYB59    --------->ICU4                 --------->ANAC46                           <---------AHL20(2)    --------->AHL20(2)             --------->ANAC58                       ------>ZmHOX2a(1)    <---------AHL20(2)        ----------->HVH21                          --------->TOE2(3)    <---------ATHB51          --------->WRKY12--------->MYB46(3)         --------->TOE2(2) ------>ANAC58   <---------MYB52(1)--------->ANAC58                  --------->GLK1(1) ------>ANAC58<-------TEIL   --------->DOF5.7(2) <---------MYB52(1) <------ZmHOX2a(1)       ---------   atgcaaattattaacgtccgtttgatgagacgttgacacgtaaatccaaccgttggatttgtctgagagaggaatcctaagtaatttggttcgctaaggc  8885000             ------->TEIL        --------->YAB1                                                            <---------HSFB2a(2)     --------->YAB1                                ------------>CBF               --------->HSFB2a(2)     <---------ICU4    ---------->DOF2       <---------DAG2                       <---------HSFC1(1)    <---------YAB1 --------->YAB1          ---------->ID1             ------>ZmHOX2a(1)  --------->YAB1  <---------YAB1     --------->ARR11(3)              --------->ANAC46              <- --------->AHL20(2)<--------HAHB4--------->YAB1   <-----------GT1 --------->ARR14(2)       *TSS    <- ->DOF2<---------YAB1<---------YAB1<---------YAB1 --------->YAB1  <---------ARR14(2)     --------->GLK1(2)   ccatttattattatgagcctattattaaagcccatttatgattttggccttatcacaattcacaagagtatcctccactaatctctagaagaaactgttt  8885100                 <---------ARR11(3)           <---------At4g35610           ----------->RAV1(2)           --------->At4g35610           <---------ZAT2           =============================RAV           --------->ZAT2         ===============================RAV         <-----------RAV1(2)      ------>MYB46(1)      ------>MYB83    --------->DEAR3(1)                                                                     --------->ARR14(2)    --------->MYB46(3)                                                                     --------->ARR11(3)    <---------MYB46(2)                                             <---------TOE1(3)       <---------    <---------MYB52(2)      ----------->RAV1(1)              <----------DOF2               <---------ARR11(1)   --------->ANAC58      --------->ANAC46               <---------At4g35610                <---------ARR11(3)   --------->ANAC58 <----------DOF2            --------->LBD16     <---------TOE2(3)       <---------ARR14(2) ----------TGA1  --------->ARR11(3)            ----------------->AGL2            <----------DOF2 ----------HVH21--------->GLK1(1)              ----------------->AGL3      <<<<<<<<<TBF1  <---------CCA1(2)   tcgtcaccgaaccagctgaaatctttttcgcaacaaaacaaactctatccccaaattcagaagctttttagggtttcttcttcctttcgcacatatcttc  8885200                                  ---------->ID1                            <----------DOF2                         <---------ARR14(2)                         --------->ARR14(2)            <---------AtLEC2                         <---------ARR11(3)        <----------DOF2        <---------AHL20(2)                         ------->TEIL       ----------->GT1           <---------AHL20(2)                        <---------CCA1(2)   <---------ANAC55(2)   --------->ICU4  <---------WOX13(1)  <---------ANAC58     --------->MYB59     <------NtERF2               <---------DAG2 --ARR10              <---------ANAC58 --------->WOX13(1)    --------->ETT(2)              <---------   tccgattgattttgcagtgaaattgtgtatctttttgttgttaatcaggtaaacttttcatggtcgccatgtttattttttcgctagatcgagctttttt  8885300                                                          <---------MYB46(3)                                                        <-------GAMYB                                                       --------->MYB111(2)                                                       --------->MYB55(2)                                                       <---------MYB46(3)                                 <------MYB83        <---------ANAC58                             <-----------RAV1(1)     <-------GAMYB                       <------MYB46(1)               <---------ANAC58                       <------MYB83        <---------AHL20(2)                 --------->AHL20(2)      <---------AHL20(2)                 <---------AHL20(2)<---------ANAC46 <------MYB83              <---------ARR14(2) <------MYB46(1)    <------MYB46(1)              --------->ARR14(2)<---------AtMYB61  <---------AtMYB61                    --------->AHL20(2) -DOF2    <---------LBD16   <---------TOE2(3)  --------->ATHB12 ------->TEIL            <---------AHL20(2)   tcttcagtcaatttcggattttatttggtttatgttggtgtatattttttgatttggttgttgttgaatcttcttagaaatgggttttgtttaattttga  8885400                               <---------YAB1                             --------->YAB1                            --------->ICU4                <---------------AGL15                --------------->AGL15               ----------------->AG               ----------------->AGL2                                              --------->GLK1(2)               <-----------------AG                   ------>ZmHOX2a(2)       ---------->DOF2               ----------------->AGL1                 ======================HOX2a_HOX2a              <-----------------AGL1            <-------GAMYB                --------->YAB1 <---------YAB1<-----------------AGL1        <---------ANAC46        <------ZmHOX2a(1)  <---------MYB52(1)   attttgattttgtttttcccctaatcggaaatgatgaaaatggagatgtgtgttgatcggagtatgttataggattgaatcaaagtttctgttttttttt  8885500                                                --------->YAB1                                             <---------CCA1(2)                                           --------->ANAC55(2)                                           <---------ANAC58                                           <---------ANAC46                                           <---------ANAC55(2)                                      <---------MYB46(3)                                  <---------AtMYB61                                  --------->ALFIN1                                <-----------RAV1(1)                   --------->ATHB12  <---------AtMYB61                            ------>ZmHOX2a(2)      <---------MYB46(3)      <---------At4g35610      ----------->GT1          <---------AGP1-------    <---------At4g35610   --------->CCA1(2)<---------ANAC58                     --------->ARR11(3)   tctcagagctgttgaagtgaatgtttggatatagctgtggtggtttcgtatcatgtccagtaatatgggaacagagcttattgatctggagactgtgaaa  8885600  Previous    Next  AGI:  At5g25510.1    Description:  serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putative. Identical to Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' iota isoform (B'IOTA) [Arabidopsis Thaliana] (GB:Q93YV6); similar to ATB' GAMMA, poly(U) binding / protein phosphatase type 2A regulator [Arabidopsis thaliana] (TAIR:AT4G15415.2); similar to ATB' GAMMA, poly(U) binding / protein phosphatase type 2A regulator [Arabidopsis thaliana] (TAIR:AT4G15415.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44117.1); similar to protein phosphatase 2A B'kappa subunit [Oryza sativa (japonica cultivar-group)] (GB:CAC85920.1); similar Range:  from: 8882471    to: 8884837    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g25520.1    Description:  transcription elongation factor-related. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G11430.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44119.1); contains InterPro domain Transcription elongation factor S-II, central region; (InterPro:IPR003618); contains InterPro domain Spen paralogue and orthologue C-terminal (InterPro:IPR012921) Range:  from: 8885091    to: 8889623    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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