Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                        <---------ANAC58                                                                           <---------HSFB2a(2)                                                           <---------HSFB2a(2)        <---------ANAC58                                            --------->GLK1(1) <---------ETT(2) --------->ANAC58     <                                         <---------TOE2(3) ------>ZmHOX2a(1) ---------->DOF2        <                              <---------At5g28300         <---------LBD16  --------->HSFB2a(2)      <     ---------->DOF2         <-----------GT1<---------GLK1(1) --------->ETT(2) --------->ANAC58 -----   agattagaaaagaagagagactaattttgttttaccatggatttagatttccagttttgtcctggagacagagacttccaaaagcaaggcttgctcacat  8867200                                      ---------->ID1            --------->ZAT6      <---------ARR11(3)           <---------YAB1       --------->ARR11(3)     ------->TEIL              --------->REM1(1)                                                   <-    <---------CCA1(2)        ----------->RAV1(1)           <---------GLK1(2)                       <- ---------ANAC58          --------->ANAC58                 <---------ARR14(2)                      <- ---------ANAC58          --------->ANAC46                 --------->ARR11(1)        ---------->DOF2 ---------ANAC46          --------->ANAC58                 --------->ARR14(2)<-------TEIL     <------ ---->GLK1(1)           ------>ZmHOX2a(1)      ---------->DOF2           <---------TOE2(3)    -------   ttccttgtatcttatcagtagcattcctaggcaacatcttgttctcttcaaaagctggatggattcggcaaaattagggttcataaacaaagacgaagat  8867300   <---------AtLEC2   <---------ANAC58                                        <---------MYB52(1)   <---------ANAC46                                      <---------ANAC58                          --   <---------ANAC58                               <----------DOF2                                  <- --------ANAC58                                  --------->TOE2(3)                             ------ --------ANAC46                             --------->AHL20(2)                               -------- --------ANAC58           --------->At5g28300 <-----------GT1       <----------DOF2          -------- ---At4g35610            ----------->GT1--------->ICU4   <---------ANAC58    <----------DOF2 -------- -->At4g35610    ----------->GT1  ----------->GT1--------->TOE1(3)  <---------DAG2   --------->At4g35610   gacttgcatgtaatgaaatcagtgaaacagtaaaactggataaaaattaaacctttaatgcgttatctcgcttttcttactttcagtagctaaacccgaa  8867400                                                                                      <----------ID1                                                                                      ----------->GT1                                                                                     ----------->GT1                                                                                 ---------->DOF2                                                                                <---------WRKY12     ---------->DOF2                                                            <---------WRKY38(1) --------->GT1                                                                <-----------HVH21 --------ZAT6                                                          <---------------AtSPL3 ---->DOF2               ----------->GT1                       --------->ANAC58 <---------WRKY45 ->ANAC58         --------->ANAC58                             --------->ANAC58--------->WRKY18(1) ->ANAC58         --------->ANAC58                        ---------->DOF2  --------->SPL7           < ->ANAC46         --------->ANAC46                   <----------ID1    <---------------AtSPL8     ---   agtgttacaaagcagagaacacgaaaatggtgactaatgagagacacagagaaaaacgaagaaagaagcaaaatttgtacggtcaaaggggaaaaaaact  8867500                                                               --------->LBD16                                                              --------->DEAR3(1)                                                             <------NtERF2                                                             --------->ATERF1(1)                                                           --------->DEAR3(1)                                                         <-----------HVH21                                                        <---------bZIP60(1)                                                        --------->O2                                                        --------->bZIP60(1)                                                        <---------bZIP60(2)                                    --------->ANAC58    <---------TGA1a             <-----------HVH21                                    --------->ANAC58    <---------O2               --------->DEAR3(1)                             ---------->DOF2          --------->MYB52(1)          --------->DEAR3(2)                             =====================================bZIP_DOF       ------->TEIL                         <---------ANAC58        =================bZIP_DOF      <---------ALFIN1                         <---------ANAC58   <----------ID1 <---------DEAR3(1) --------->ANAC46     <-    <---------At4g35610  <---------ANAC55(2)<---------ANAC58 <---------LBD16  --------->ANAC58     --    --------->At4g35610  <---------ANAC46   <---------ANAC46------>NtERF2   <-----------GT1        -- -----------HVH21  --------->AHL20(2)       <---------ANAC58<---------ATERF1(1)--------->MYB46(3)  -- ------>MYB59  ---------->DOF2 --------->DAG2    ---------->DOF2<------NtERF2 --------->ANAC58     <-   taggtcagaagtcagaacaaagtaaatgcgtaaaaggcaagtaattgcgtcaaaagtaacgtcgccggagcatgaaattcacgcaccgtcgcagtcgaag  8867600            <---------At4g35610            --------->At4g35610            <---------ZAT14            <---------ZAT2            --------->ZAT14                                                                  --------            --------->ZAT2                                      --------->HSFB2a(2)          <-------     ------>ZmHOX2a(1)                                       <----------DOF2              --------->At4g35610 --------HSFB2a(1)                                 <---------ARR11(1)                   <---------WRKY38(1) ------->HSFB2a(1)                                 ------->TEIL <---------HSFB2a(2)     <---------WRKY12 ------->At4g35610                                <---------ARR14(1)                 ------->GAMYB -- ------->HSFC1(2)                                 <---------GLK1(2)        <------ZmHOX2a(1)------->GAMYB --------HSFC1(2)    <---------At4g35610*TSS      <---------CCA1(2)---------->DOF2  --------->MYB46(3)   aagcttcctctcgctgctgtgtctgctcttctcagcccttgttctccaaatcgaatctctctgctttcagaaagagaggagactcaacagtcaacagcac  8867700                                                                 <---------ARR14(2)                                                                 --------->ARR14(2)                                                               <------NtERF2                                                     <---------AHL20(2)                           ----------->GT1           <---------YAB1                       --------->REM1(2)            <---------AHL20(1)  --------------->AGL15                    <---------ANAC46                --------->YAB1--------->CCA1(2)                    ====================================================================MADS_MADS                    --------------->AGL15  --------->WRKY18(1) --------->LBD16       <-----------HVH21<---------AtLEC2 ----------->GT1      <---------ANAC46    <---------O2  <---------ZAT14   <---------AHL20(2)       <---------LBD16    --------->O2<---------ZAT14     <---------AHL20(1)       <-----------------AGL1         <-------- ->ZAT14        --------->ZAT18     --------->AHL20(1)--------->ATHB12  <---------------AGL15 --ZAT14      <---------------AtSPL8--------->AHL20(2)--------->ATHB51 ----------------->AGL1 --------->HVH21--------->ZAT14  --------->YAB1     --------->AHL20(2) ----------------->AGL2--------   tgtgacaagtgtcaaatgtgtactgtgtatggaaataataaaatggtcaaacaatattattgggccggatatggcccatattagaaactggcccatcata  8867800                                                     <---------WOX13(1)                                                   --------->ATHB12                                                   --------->ATHB51                                                --------->ANAC46                                                <---------ANAC55(2)                                                --------->ANAC55(2)                                                --------->ANAC55(1)               ----------->GT1                                          <---------MYB52(2)                 ---------->DOF2--------- -ATHB12                           ----------->GT1<---------YAB1          --------->HSFB2a(2) ->YAB1                   ----------->HVH21 --------->MYB52(1)            <---------HSFB2a(2)   ctctagaatcgattcgattgcaagtgaattgacaagtttgttaaactaacacataattgacacatttagcattgttacagaaagttgtaaataacatatt  8867900                                                                   --------->LBD16                                                                 <---------LBD16                                                                --------->MYB52(1)                                                               <---------ALFIN1                                                               --------->AtMYB61                                                               --------->DEAR3(1)                                                            <---------ALFIN1                                                            --------->ANAC46                                                            --------->ANAC58                                                            --------->ANAC58                  <------                            <---------ANAC58              <---------ALFIN1                   <-------                <------MYB83<---------ANAC58      <---------At4g35610                     --------->ANAC46                <------MYB46(1)                   --------->At4g35610  <---------ANAC58  <---------LBD16               <---------AtMYB61       --------->ZAT18    ------->GAMYB<---------ANAC58--------->MYB46(3)             --------->ARR14(2)        --------->ZAT14    --------->AtMYB61          --------->ANAC58             <---------ARR14(2)        <---------ZAT18   --------->MYB46(3)          --------->ANAC46  <-----------GT1        <----------DOF2       ---------->DOF2--------->MYB46(3)     --------->ANAC58 >ARR11(3)  <------ZmHOX2a(1)       ---------->DOF2  --------->At5g28300        --------->ZAT18------   gttgttactagagaggattggtctagtctttcttgacgaaatgcactcttacagcggtaaccacaccaccggagcgttcaagttcacaaaccacggagtc  8868000                                     <---------MYB55(2)                                     --------->MYB46(3)                                    ------>MYB83                                   --------->ANAC58                                ------>MYB46(1)                                ------>MYB83                                                    <----                                -------->P                                                      -----                               --------->ORA47(1)                                               -----                    ----------->RAV1(1)                                                        <-----         <---------GLK1(2)   --------->DEAR3(2)                                                ------       <---------YAB1        --------->MYB46(3)                                                ------ --------->ARR14(2) ------>NtERF2 --------->MYB46(3)             --------->GLK1(2)            ------- <---------MYB52(1)----------->HVH21------>MYB46(1)             <---------GLK1(2)             <------ ---ATERF1(1)      <---------ETT(1)--------->ANAC58       <---------MYB52(1)            <-----------GT1 --GLK1(2)         --------->ANAC46--------->ANAC46    --------------->AGL15        <----------DOF2 --->ATERF1(1)   ------>NtERF2--------->DEAR3(1)   <---------GLK1(1)              ------>ZmHOX2a(1)   tccgatattcagattgtgcctccgacatagaaccgaccagccactgaaacaaggtttcccgttatagattctattctcgccttcctcttttttctccccg  8868100  Previous    Next  AGI:  At5g25470.1    Description:  DNA binding. similar to DNA binding [Arabidopsis thaliana] (TAIR:AT5G25475.2); similar to DNA binding [Arabidopsis thaliana] (TAIR:AT5G25475.3); similar to DNA binding [Arabidopsis thaliana] (TAIR:AT5G25475.1); contains InterPro domain Transcriptional factor B3; (InterPro:IPR003340) Range:  from: 8865654    to: 8867640    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g25475.1    Description:  DNA binding. similar to DNA binding [Arabidopsis thaliana] (TAIR:AT5G25470.2); similar to DNA binding [Arabidopsis thaliana] (TAIR:AT5G25470.1); contains InterPro domain Transcriptional factor B3; (InterPro:IPR003340) Range:  from: 8867800    to: 8869655    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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