Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                           --------->MYB52(1)                                                                                       <xxxxxxxxxxxxx                                                                                <xxxxxxxxxxxxxxxxsmallRNA(i)                                                                              --------->ARR14(2)                                                                              --------->GLK1(2)                                                                              <xxxxxxxxxxxxxxxxsmallRNA(s)                                                                              <---------ARR14(2)                                                                             xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                            --------->ARR14(2)             <xxxxxxxxxxxxxxxxsmallRNA(i)        <---------ARR14(2)                  --------->GLK1(2)              <xxxxxxxxxxxxxxxxsmallRNA(s)   ----------->GT1                          <---------ARR14(2)----------->GT1<xxxxxxxxxxxxxxxxsmallRNA(i) ---->YAB1                            --------->MYB52(1)    xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) >AHL20(2)                        <-----------GT1  --------->YAB1       --------->MYB52(1)  --------- -AHL20(2)      ----------->GT1 <---------AHL20(2)<------ZmHOX2a(2) <-----------GT1--------->ANAC46--   agaattagtgaattcgaagtgtaatttagacgatttaaactatccgaatccgatcaaaactatacgattaaaactatccgaatccgagccaaaacggtat  8863000                       --------->ARR14(2)                       <---------ARR14(2)                      <---------CCA1(2)                     --------->LBD16                    <---------ANAC58                    <---------ANAC55(2)                    --------->ANAC55(2)                    <---------ANAC46                    <---------ANAC55(1)              --------->AHL20(2)           <---------AHL20(2)             <---------AHL20(2)           <---------AHL20(1)             --------->AHL20(2)           --------->AHL20(1)         <---------AHL20(2)           --------->AHL20(2)        <---------ARR11(3)                               <---------ATHB12      --------->AHL20(1)             <---------AHL20(1)                --------->ANAC46      --------->AHL20(2)             --------->AHL20(2)                --------->ANAC58  --------->At4g35610      <---------AHL20(2)      <---------HSFB2a(2)   ------>ZmHOX2a(1)  --------->ANAC55(1)  <---------AHL20(2)<---------ANAC58 <---------AHL20(2)                --------->ANAC55(2) xxxsmallRNA(s)  <-----------GT1     --------->AHL20(1)      <---------ANAC55(2)    --------->YAB1 -->GT1<---------AHL20(2)     --------->HSFB2a(2) ----------->RAV1(2)  --------->ANAC58--------->YAB1 --------->GT1<---------AHL20(2)     --------->ARR11(3)      --------->ANAC55(2)--------->ZAT6   ----   ttagtaaatttaatattttattccgtatatttctagcaatatatttaaatactcctgcccattacctgtttatacgcaattacctctaatcatctacaaa  8863100                             <-----------HVH21                            --------->ANAC46                          <---------YAB1                     <---------ANAC58             <---------WRKY18(1) <---------AHL20(2)             <---------HSFC1(2)                <---------ANAC58      --------->AHL20(1)             --------->HSFC1(2) <---------At5g28300                  --------->AHL20(2)           <-- <-----------------AGL1   --------->LBD16      <---------ANAC58      <---------AHL20(1)   <----------DOF2 ------->RAV1(2)     <---------ANAC58--------->TOE2(3)              --------->YAB1        <---------DAG2   cctgtcccaattggacacttctggcttccccagtcacagcctaaacagagcttgactcaataaacagcaaatataattgcatcaaaacaatacttttttt  8863200                                                                                 --------->ALFIN1                                                                                ------->PIF5                                                                                <-------PIF5                                                                                <-------MYC3                                                                                ------->MYC2                                                                                <-------MYC2                                                                                ------->MYC3                                                                                <-------MYC4                                                                                ------->MYC4                                                                               --------->TGA1a                                                                               <---------O2                                                                               <---------PIF3(3)                        --------------->AGL15                                  --------->O2                      -------->P                                               <---------TGA1a                     <-----------GT1                                           --------->PIF3(3)                  --------->ANAC58                                             =====================MYC_MYB                  --------->ANAC58                                           <---------ALFIN1               --------->LBD16                                             ------->GAMYB      -------              --------->HSFB2a(2)                                          ==============MYC_MYB              <---------HSFB2a(2)                                         --------->ANAC46    -------              <---------ANAC55(2)      <---------TOE1(3)                <---------ALFIN1    <--------        <---------AHL20(2)             <---------TOE2(3)           <-----------HVH21       ------>MYB46(1)     --------->AHL20(2) <---------------AGL15                     <---------bZIP60(1)      -------->P     <---------AHL20(2) ------->GAMYB  --------->DAG2   ---------->DOF2--------->MYB46(3)  ------>MYB83     --------->AHL20(1)<-----------------AGL1           =================================bZIP_DOF---- ---------GT1<---------LBD16   ----------->GT1 <---------CCA1(2)  --------->bZIP60(1) --------->GLK1(1)   ttacaaattttttattccggaagtaaccccaaatggtcaataaggttccaaatctctgaaaaggaatgaggtcacaaccccacgtgggataccaactagc  8863300                   <---------AHL20(2)                   <---------AHL20(1)                   --------->ARR11(3)                   --------->AHL20(1)             ----------->GT1             --------->ANAC55(1)         <---------ALFIN1       <---------ALFIN1                                                    <---------ALFIN1       --------->ANAC58                                           *TSS   --------->ANAC46       --------->ANAC58                                          ------------>CBF      <---------ZAT18                                           --------->ANAC58 -->ANAC58   --------->YAB1                                     --------->ANAC58            <-------- -->ANAC58   --------->ANAC58               --------->YAB1      --------->ANAC46          ----------- -MYB52(2)   --------->ANAC58              <---------YAB1<---------------AGL15           <---------ICU4 ------->RAV1(1)  <-----------TBP   <---------ARR11(3)   --------------->AGL15     <----------DOF2 <-   cacagtggcacacactcgtaatatatagaaacctccaaggtcattttcatagttctatccccttataagcaatagccacaactctctttgctaattacat  8863400                                                                                      <---------RAP2.6(3)                                                                                      <------NtERF2                                                                                     --------->RAP2.6(2)                                              <---------O2                           <---------ATERF1(2)                                              --------->TGA1a                        --------->DEAR3(1)                                              <---------TGA1a                ------>NtERF2                                              <---------ANAC58              --------->DREB2C(2)                                              --------->O2                  --------->ANAC46                                              <---------ANAC46              --------->RAP2.6(2)                                              <---------ANAC58              ------->GAMYB                                              ======================================MYC_MYB                                              =================bZIP_DOF     --------->DEAR3(1)                                              =================bZIP_DOF    --------->ATERF1(1)                                             <---------MYB52(1)            --------->MYB46(3)                                            <-----------HVH21              --------->RAP2.3(1)                                       --------->ATERF1(1)                 <------NtERF2                                       <------NtERF2<----------DOF2       --------->ABI4(1)                                       ----------->HVH21                  ------>NtERF2<------NtERF2                                      <-----------HVH21                   <---------ATERF1(1)   --------->ANAC46                   <---------ATERF1(1)                --------->DEAR3(1)      ---- --------->ZAT6                      <---------ANAC58                    <---------ALFIN1    -------- ---GT1                              <---------ANAC58                 --------->ANAC46------>NtERF2 ------------>TaNAC69(2)   --------->ICU4  --------->DEAR3(1)  <----------DOF2      <---------RAP2.6(2) ----------GT1         --------->LBD16<-----------TGA1     --------------------->WRI1--------->ATERF1(2)   tttacactcatctcgttctctcttccgtcaatatggaaggcgtcaccgtcgtgtctttcttccttcttttcatcgccaccgccatggccgccaagtccac  8863500              --------->DOF5.7(2)              --------->At5g28300             ----------->GT1            <---------ANAC46           --------->RAP2.6(3)         ----------->HVH21         ----------->TGA1       <---------ANAC58       <---------ANAC55(1)       <---------ANAC58       <---------ANAC46                               --------->ANAC55(2)       <---------ANAC55(2)                       <---------ICU4                         <---------YAB1       --------->ANAC55(2)                       --------->YAB1         --------->TOE2(3)    ------>ZmHOX2a(1)                 <-------TEIL    <---------ANAC55(2)        ---------->DOF2 ----->DEAR3(1)   --------->ZAT6  <-------TEIL  <-------TEIL  --------->LBD16 --------->YAB1       <- ->ZAT18--------->LBD16  <-----------GT1    <-------TEIL    <---------LBD16--------->YAB1     <------   cgtctccttccgtgacggtaactctatttacacatatacatacacatacattcattacatattccggtttactacattaataacaaagttctgatttatc  8863600                                                                           <----------DOF2    -------                                                              --------->AHL20(1)              <------ ---------DOF2         --------------->AtSPL8            ---------->DOF2  <---------DAG2     <------- -----GT1              <---------------AtSPL8     <-----------GT1  <-----------GT1  <---------TOE2(3)   actttcaagtctgaaaattggaattggggtactatacaattcaagttttttttttccttcaaagtatattaacatacctttttttttatgttgatatatc  8863700                                                          <---------AHL20(2)                                                     --------->At5g28300                                                  <---------ZAT14                  <-----------GT1                     ------->TEIL                 --------->ZAT14    <---------AHL20(1)                 <---------------AtSPL3         <---------ZAT14      --------->AHL20(2)           --------->TOE1(3)                    --------->ZAT14      --------->AHL20(1)       ---------->DOF2 --------->TOE2(3)        --------->ZAT18      <---------AHL20(2) -->ARR11(3)     <---------------AtSPL8    <----------DOF2<---------ATHB51   <---------AHL20(2) ---ARR11(3)     --------------->AtSPL8   --------->TOE2(3)<---------ICU4   <---------AHL20(2) --CCA1(2)----------->GT1           <-----------GT1 ----------->GT1 --------->AHL20(2)   ttgaagaaaaaaagcttaaattgtacctcaaatccaattttcaacctttgtgtacagtaaattatggcaattttattttttattttcacaaatttagtgg  8863800                                                          <---------YAB1                                                         --------->AHL20(1)                                                         <---------AHL20(1)                                                         --------->AHL20(2)                                                         <---------AHL20(2)                                                        --------->YAB1                                                        <---------ICU4                                                       --------->ICU4            --------->AHL20(1)                                                       <---------YAB1            <---------AHL20(1)                                                     <---------ICU4              <---------AHL20(2)                                                     --------->YAB1          <---------ICU4   <------                                              --------->ARR11(3)          --------->YAB1<------------                        <---------AHL20(2)    <---------ARR11(3)     <---------YAB1     -------------                       --------->AHL20(2)  --------->AHL20(2)   <---------YAB1   --------->AHL20(2)                 --------->YAB1            <---------AHL20(2) --------->YAB1 --------->YAB1   -------               --------->ANAC46    ----------->GT1  <---------YAB1 --------->CCA1(2)    <------------   gaacaaaaactcatttcactcaaaattttatatagaagcgagaaataaaatcttataattataattgtgatatgaataatcaatataatgctggtaccta  8863900  Previous    Next  AGI:  At5g25460.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G11420.1); similar to unknown [Ricinus communis] (GB:CAB02653.1); contains InterPro domain Protein of unknown function DUF642 (InterPro:IPR006946) Range:  from: 8863366    to: 8865680    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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