Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                               --------->ANAC46                                                                             --------->ANAC58                       <---------AHL20(2)                            <---------AHL20(2)        --------->ANAC46                                             --------->AHL20(2)  ---------->DOF2        --------->ANAC58--------->ATHB12                          <---------ICU4  --------->ARR14(2)        --------->ANAC58--------->ATHB51        ------>ZmHOX2a(1)<---------YAB1   <---------ARR14(2) ----------->GT1       <---------YAB1   <---------HSFB2a(1)      --------->AHL20(2) --------->YAB1 <---------ANAC55(2)  <---------AHL20(1)<---------HSFC1(2)       <---------AHL20(2)<---------ATHB12-- --------->ANAC55(2)  --------->AHL20(2)--------->HSFB2a(1)     XXXXXXXXXXXXXXXXXXXX>MIR844  <------- --->AHL20(2)         --------->YAB1    --------->HSFC1(2)<---------At4g35610--------->ANAC58<-------   aataagtaacaagaaacttaacaatattattggttttgccgaaggttctcctatagattgagatgatataattacttacaagccaatcttgaaaagcttg  8856400                              ------>NtERF2                             --------->DEAR3(1)                             <---------DEAR3(1)                            --------->RAP2.6(3)                           <---------ATERF1(1)                <---------TOE2(3)                           ------>NtERF2                <------NtERF2                          ----------->HVH21     <---------ANAC58                     <---------WRKY18(1)     <----------DOF2  <---------TOE1(3)         <---------ARR11(3)                    ----------->HVH21       <---------DAG2   <---------DOF5.7(2)       --------->ZAT2                  <---------ANAC58 --------->AtLEC2    <------NtERF2                  --------->ANAC58        ----------->GT1-------->ZAP1     <---------ALFIN1    --------->MYB52(1)       --------->ANAC58 ------->ATHB12   <---------ANAC58 --------->ANAC58    --------->LBD16          ------->TEIL --ANAC58       <-----------GT1    --------->ANAC58  <---------LBD16        <---------TOE2(3) --ANAC58 --------->AHL20(2)--------->ATERF1(1) <---------ANAC58         <---------WOX13(1)     -----   ttcattggctaagtaaattttcttgaccgcgacggccatgccaacacctttcttggccggagataacgttttgggattgatgtatcccaagctctctcct  8856500                                                  --------->REM1(2)                                              <------NtERF2                                             ------>NtERF2                                        ------>ZmHOX2a(2)                                        ====================================HOX2a_HOX2a                                       =====================================HOX2a_HOX2a                                       <------ZmHOX2a(2)                                      --------->ARR14(2)                                      --------->AGP1                         ---------->ID1--------->CCA1(2)                    --------->TOE2(3) <---------ARR11(3)                   --------->ATHB12   <---------ARR14(2)                                <-----------GT1                   <---------ICU4     --------->ARR11(3)                             --------->YAB1                   --------->YAB1     <---------AGP1                 ------>ZmHOX2a(1) <---------YAB1                  <---------ATHB12   <---------CCA1(2)           <---------ALFIN1   <---------AHL20(2)                  --------->ICU4    ----------->ARR10   <----------DOF2             <---------YAB1 ->ZmHOX2a(1) --------->LBD16<----------DOF2<---------ALFIN1 <---------ALFIN1    --------->AHL20(1)<-   agttccatctggtttccgaaatcattagtcgctttcttcagatctgccaccgtgaagactttcacaccctcctccactatacatatattataacaaaact  8856600                                                                                               ------                                                                                              -------                                                                                         <---------MYB46(3)                                                                                        --------->ALFIN1                                                                                      <---------ANAC58                                                                --------------->AGL15 <---------ANAC58                                                                <---------MYB59       <---------ANAC46                                                  <---------AHL20(1)                  <------MYB46(1)                                                  --------->AHL20(1)                  <------MYB83                                                 --------->AHL20(2)                  <---------MYB46(3)                                    --------->ARR14(2)          <---------------AGL15--------->MYB52(2)         ----------->GT1            <---------ARR14(2)         <-----------------AG  --------->MYB55(2)         --------->YAB1           ----------->ARR10--------->AHL20(2)            <------MYB46(1)      --------->YAB1     ---------->DOF2--------->At4g35610    <-----------------AGL1<---------DEAR3(1)     <---------YAB1    --------->YAB1   --------->LBD16        ----------------->AGL1--------->MYB46(2) --------CCA1(2)      <---------ATHB12<---------LBD16<---------AHL20(2)          <------MYB83 <------   tatatccattatagtaacattcaaatcaaaagtacttaaatccgcagagaaatatatatatgtatacctgatttgggagcatttggttcggtgggaagtg  8856700                                          --------->TOE1(3)                                          --------->TOE2(3)  <---------ZAT2                          --------->YAB1  --------->At4g35610              <---------At4g35610  <---------At4g35610     --------->ARR14(2)  --------->ZAT2          <---------ARR14(2)         <---------ZAT6 --->ALFIN1               <---------GLK1(2)    --------->ZAT6              <----------DOF2         -- -->HSFC1(2)     ----------------->AGL1 <---------ARR11(3)   *TSS       <------ZmHOX2a(1)      <----- ---HSFC1(2)    <-----------GT1    --------->At4g35610      <---------ATHB12               --------->DEAR3(1)   tcgaagctgagagacaatttcccattcggatactctctgctaaatcttaacactagagttcaatgaagaagagaggacttttagtttttcacaccgagga  8856800                                         <----------DOF2                 --------->YAB1          --------->ARR14(2)        <---------ANAC46               <---------MYB52(1)        ------->GAMYB            --------->WRKY12               <------NtERF2     <---------DOF5.7(2)         ----------->HVH21            --------->ANAC46     --------->MYB52(1)       <---------MYB46(3)              --------->DEAR3(1)    <---------WRKY38(1)    --------->MYB52(1)              ----------->HVH21                   <-----    <---------WRKY12       <---------DOF5.7(2)             --------->ANAC46                ------>NtERF2    <---------WRKY45      <---------WRKY38(1)             --------->SPL7<---------YAB1    --------->ANAC46 -------->DOF2            <---------WRKY12      <------MYB83  <---------DEAR3(1)  <-------TEIL<------ -ZmHOX2a(1)              <---------WRKY45      <------MYB46(1)------>NtERF2  <---------------AtSPL8   gcaaagtcaacgaaaacgcgtttgagagtcaacggttgacgcgttttatttggtgagtcatacgacgccgttttttgataagagtacatactacgccgtt  8856900                   <---------ANAC46                  <------NtERF2                 ------>NtERF2                                            ----------->TBP                <---------DEAR3(1)        <---------HSFB2a(1)   ----------->GT1             --------->ANAC46             <---------HSFC1(2)   --------->LBD16            --------->SPL7                --------->HSFB2a(1)  <---------TOE1(2)    ----------->HVH21          --------->TOE1(2)               --------->HSFC1(2)  <---------LBD16      <------NtERF2    *TSS ----MYB52(1)----------->HVH21      <---------LBD16           --------->LBD16  --------->MYB52(1)  -- ---SPL7<-------TEIL         --------->At4g35610             <---------LBD16 ---------->DOF2      ---   tggctagagtttcatacgacggcgtttaaacagatgtctctggatgcttcttccttcttcgttcccgggttaaattacaaatagcggcgaaggggtttca  8857000                                                                      <------ZmHOX2a(1)                                                                    <---------TOE1(2)                                                                    --------->LBD16                                                                   <-----------RAV1(2)                                       <---------ANAC58            <---------LBD16                                       <---------bZIP60(1)       ------>ZmHOX2a(2)                                       <---------ANAC58         =============HOX2a_HOX2a                                       <---------ANAC46         <------ZmHOX2a(2)                  <---------MYB52(1)   --------->bZIP60(1)     <---------ARR14(2)                 --------->TOE2(3)<---------ICU4               <---------ARR11(3)     <-----------GT1     --------->LBD16 <------NtERF2         --------->ARR14(2) ---------->CBF --------->ANAC46<---------ARR11(3)             --------->ARR11(3) ------>YAB1   <---------TOE2(3)--------->ARR11(3) --------->LBD16--------->TOE1(2)   tcacaattcacatcttcaacgttactccgaagaagataatggcgtcgtttctccagagactagtagatcccaggaagaatttcttagctcgtatgcatat  8857100                           --------->ANAC58                           --------------->AtSPL3                           --------------->AtSPL8                           --------->ANAC46                           --------->ANAC58                          <-------TEIL                         --------->CCA1(2)                         --------->ARR14(1)                        <---------ARR14(2)                        --------->ARR11(1)                        --------->ARR14(2)                      ----------->ARR10                    <---------At4g35610                    --------->LBD16                              --------->TOE1(3)                 <-                  <---------LBD16                                --------->TOE2(3)               <---                 ------>NtERF2                                ------>MYB46(1)    <-----------------AGL2                 <---------ATERF1(1)   <----------DOF2        ------>MYB83       <-----------------AG                --------->DEAR3(1) <----------DOF2          <---------MYB59      <-----------------AGL1              ----------------------->TaNAC69(2)            --------->AtMYB61    <-----------------AGL3   gaagtctgtttctaatcgcctccgcagatacggtactctttctttctctcttaccctagaaaccaaaccctaattctcttctggctgattttgggaattt  8857200                                  <---------ARR11(3)                                  --------->ARR11(3)                            <----------DOF2                           ==================HOX2a_HOX2a                           ------>ZmHOX2a(2)                          <------ZmHOX2a(2)                          ===================HOX2a_HOX2a                         <---------ARR14(2)                         --------->ARR14(2)                         <---------ARR11(3)                   <-------TEIL <---------YAB1                  --------->ARR14(1)                                         <---------At5g28300                  --------->CCA1(2)                                        --------->WRKY38(1)     --                 --------->ARR14(2)          --------->ATHB12   --------->ARR11(3)                 --        --------->MYB59  --------->ARR11(3) <---------YAB1      <---------ARR11(3)       <---------MYB46(3) --------YAB1    <---------ARR14(2)   ------>ZmHOX2a(1)   <---------TOE2(3)--------->WRKY12        -- --------GT1     --------->ARR11(1) ------>ZmHOX2a(2)    ---------->DOF2  --------->DOF5.7(2)     <--   tacgattttttaggtcttagatacgacgatctttatgatcctttgtatgatttggatattaaagaagctcttaatcgtttaccgagagagattgttgatg  8857300  Previous    Next  AGI:  At5g25440.1    Description:  protein kinase family protein. similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G11410.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66239.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245) Range:  from: 8854778    to: 8856761    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g25450.1    Description:  ubiquinol-cytochrome C reductase complex 14 kDa protein, putative. similar to ubiquinol-cytochrome C reductase complex 14 kDa protein, putative [Arabidopsis thaliana] (TAIR:AT4G32470.1); similar to unknown [Populus trichocarpa] (GB:ABK92701.1); contains InterPro domain Cytochrome bd ubiquinol oxidase, 14 kDa subunit; (InterPro:IPR003197) Range:  from: 8857000    to: 8858479    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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