Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                     <---------CCA1(1)                                                                   <---------RVE1(1)                                                                  <---------AHL20(1)      ------>ZmHOX2a(1)                        --------->YAB1     --------->AHL20(1)        --------- ---------AHL20(2)                        <---------YAB1          <---------ARR11(3)        -------->HAHB4 -----YAB1                                <---------ANAC55(2)     --------->ARR11(3)       --------->ICU4 ----AHL20(2)               <---------------AGL15             ---------->DOF2              <---------YAB1 ----AHL20(1)               --------------->AGL15         --------->ANAC58         <----------DOF2 --->AHL20(1)              <-----------------AGL2         --------->ANAC58      <-----------GT1  ---- -->YAB1   <---------YAB1  <-----------------AGL1 --------->AHL20(2)     --------->TOE2(3)<---------TOE2(3) -->AHL20(2)      <----------DOF2         <---------ANAC46--------->ANAC46------>ZmHOX2a(1)<---------ATHB12   atttattcctattttgatttcttttagttactagtaagggtattatgtataataaactacaagtaaaagatatttcctaaatatacttttctaatgataa  8831300                                                                                                 ----                                   --------->ANAC46                                           <------                                   --------->bZIP60(2)                              --------->ATERF1(1)                            <----------DOF2 <---------TOE2(3)                      <---------ATERF1(1)                    --------->ARR11(3)    <---------AHL20(2)                     <------ZmHOX2a(1)--- >YAB1<----------DOF2  <-----------GT1   --------->AHL20(2)                 --------->YAB1 <---------ICU4 ------>DOF2    ---------->DOF2  <---------ALFIN1           ----------->GT1<---------YAB1  --------->ATHB51   aaagatgccttttttcatcaaagttctaccctttcccacctcatttaatgttcttgttcttcttgtaaattttgtttataataggaggctccataatttc  8831400            --------------->AGL15           <----------DOF2            <---------------AGL15           <---------DAG2            --------->TOE2(3)            <-----------GT1                                       <-----     <---------TOE2(3)    --------->WRKY18(1)                                          -------->ATHB1    <-----------GT1   --------->ZAT14    <---------AHL20(2)          --------->AHL20(2)--------->ATHB12 ----->TOE2(3)    <---------ICU4   --------->YAB1       <---------DAG2                 --------->ATHB51 -----GT1  ----------------->AGL3  <---------AHL20(2)   --------->TOE2(3)             <---------YAB1 --->ZmHOX2a(1)--------->YAB1      --------->AHL20(2)   <---------MYB59             ------>ZmHOX2a(1)   cttatataacgtttccataataagttcagtcaaacatttatatttactttatctaataccttacccataaaaaaaatatgctattcctattattgatttt  8831500                --------->AHL20(1)                <---------AHL20(1)                      <---------DAG2                             <-             --------->AHL20(2)                         <----------DOF2                           ---            <---------YAB1                      --------->YAB1                  --------->AHL20(2)---       <---------bZIP60(1)                      --------->AHL20(2)  --------->TOE2(3)             ---       --------->bZIP60(1)  <-----------GT1     <---------AHL20(2)  <---------MYB59              <--- ------GT1--------->YAB1------->TEIL--------->MYB59  <-----------GT1<---------DAG2             ------   ctcttcttgacatcataatatatatgtatataacaagttaagtcaaacatttatattactttatctaataccttacccaaaaaaaaatatgctattccta  8831600      <-----------GT1 -----------CBF ----->ATHB1                          <---------AHL20(2)                                       <----- ------>ATHB51           --------->GLK1(2)                                      --------->AHL20(2) ------>ATHB12       --------->YAB1------->TEIL   <---------ZAT6         *TSS   <---------AHL20(2) ------YAB1       --------->bZIP60(1) --------->AHL20(2)          <------ZmHOX2a(1)     --------->AHL20(2) >ZmHOX2a(1)      <---------bZIP60(1) ----------->TBP           <---------TOE2(3)    --------->YAB1   ttattgattttctcttcttgacatcataatctatatgtatataaataacatagtgttttcagtcttgaggaaacaaaactaataaaatcataaaatgtct  8831700                                                   ------>MYB83                 ------>NtERF2                                  <----------DOF2  ------>MYB46(1)          <-----------RAV1(1)                                 <---------------AGL15                   <---------ARR14(2)                                 --------------->AGL15                   --------->ARR14(2)                                <-----------------AGL3                <---------------AGL15                                <-----------------AGL2               ------>ZmHOX2a(2)                                <-----------------AGL1               <-----------------AGL2 ---------                                <-----------------AG                 <-----------------AGL3 ---------                                ======================================================MADS_MADS    <-        <------ZmHOX2a(1)  <---------ARR11(3)    --------->MYB46(3)  ----------------->AGL3--------->HSFC1(2)       <---------YAB1      --------->ARR11(3)    <---------ALFIN1   <------ZmHOX2a(2)      <---------HSFC1(2)      --------->MYB59    ------->TEIL           <---------At4g35610<---------ARR14(2)      <---------HSFB2a(1) ----ETT(2)           <---------YAB1            --------->At4g35610--------->ARR14(2)     ------->TEIL   acaagagttaggattgctcttgttatgaatgtcttccttttttggttctcaccagccctaattcgttcggatccaaatatggtgcctctaagaaccttca  8831800                                                                         --------->GLK1(1)                                                                    ------->TEIL                                                                   --------->MYB52(1)                                                                 <---------YAB1                                                          --------->GLK1(1) >TOE1(3)                                                 <---------GLK1(1)                      <--- >TOE2(3)     ---------->DOF2                            <---------ARR14(2)          <---------MYB52(1) ----------HVH21               <---------ZAT6            --------->ARR14(2)     <---------ARR11(3)<--   aggtcagttttgaaacaaaagaaattagttcaagtgttcaacatcatcgtatatagtcggatatgtcatgaacggagttcaacatctgtttgtttgtttt  8831900                                         <---------ANAC58                                         --------->ANAC55(2)                                         ----------->GT1                                         <---------ANAC46                                         <---------ANAC58                                         <---------ANAC55(1)                                         <---------ANAC55(2)                                        <-------TEIL                                        <-----------------------TaNAC69(2)                                       --------->CCA1(2)              ------>ZmHOX2a(2)       --------->ARR11(1)                      --------->ANAC46          <---------ZAT6              --------->ARR14(2)                      --------->ANAC58   --------->AHL20(2)                 <---------ARR14(2)               --------->TOE2(3)  --------->AHL20(2)                 <---------At4g35610    --------->RAP2.6(3)   -------->P  <---------AHL20(2)         --------->ATHB12          --------->TOE2(2)      --------->ANAC58 ------AHL20(2)             <---------YAB1       ----------->GT1     <---------TOE2(3) <------ZmHOX2a(1) -------AHL20(2)<---------MYB52(1)   --------->At4g35610  <---------YAB1  --------->YAB1          <<<   ttatttaaaatagtgatcgtttttttttttgtcattggcagatacgtgaaaatgtaacatatgactgcattaacatttataagcaaccaggacttgatca  8832000                           <-------TEIL                       <---------TOE2(3)                 <---------AHL20(2)                --------->AHL20(2)        --------->AHL20(2)               <---------AHL20(2)   <----             --------->TOE1(3)         --------->YAB1            <-----------GT1            <-------- <<<<<<NAM   --------->TOE2(3)   ------->TEIL         ------>ZmHOX2a(1)   --------->YAB1    >>>>>>>>>   tcccttgctcaaaaaccataaaattcaggttcatgaacgtttcataaatttctctcctatggacattttactcttataaaaattgaattgaatttgacta  8832100    --------->AHL20(2)    <---------AHL20(2)   --------->AHL20(1)   <---------AHL20(1)                             <------ZmHOX2a(1)   <---------AHL20(2)                           <---------TOE1(3)                                <---   --------->AHL20(2)   --------->MYB46(3)      <---------TOE2(3)--------->ZAT6     <---------AHL20(2) -----ZAT14     --------->ICU4      --------->ANAC58            <---------ZAT14  --------->YAB1  <--- ---GT1       ---------->DOF2       --------->ANAC58           ----------->RAV1(1)  --------->AHL20(2) >WRKY63<---------AHL20(2)          --------->ANAC46       XXXXXXXXXXXXXXXXXXXX>MIR2939      --------   tacaatttattttttgaaaagatgaaaccatcagtttcaagacatgaattaaggaatcaaacagacaacactaaaacatataagaataaaatgggatgtc  8832200  Previous    Next  AGI:  At5g25410.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G60380.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14518.1); contains InterPro domain Protein of unknown function DUF239, plant (InterPro:IPR004314) Range:  from: 8831673    to: 8833512    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version