Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                   --------->ANAC58                                                                                 --------->AtLEC2                                                                                 --------->ANAC58                                                                           -------->P                                                                     ------>ZmHOX2a(1)                                                                   ------>ZmHOX2a(2)                                                                  <------ZmHOX2a(2)                                                                 --------->ARR11(3)                                                                 <---------ARR11(3)      ------>MYB83                                                                 <---------ARR14(2)      ------>MYB46(1)                    <---------YAB1                               --------->ARR14(2)    ------->GAMYB                    --------->ICU4                               --------->ARR14(3)   --------->MYB46(3)                  ---------->DOF2                                <---------ARR14(3)  --------->ANAC58     --------->ANAC58                                        ---------->DOF2--------->ANAC46---------     --------->ANAC58--------->ATHB12              ------->TEIL----------->ARR10 --------->ANAC46 <-- ------HVH21     --------->AHL20(2)             <---------ATHB12 <---------GLK1(2)   --------->ANAC58   cacagacaaggaatttcaaataaagattgaaactttgaatttcaaaaacaatgaatttgaagagaaagatcctcacttaccccatgcaaccaaataactg  8802300                                                       ------>ZmHOX2a(2)                                                      <------ZmHOX2a(2)                                                     --------->AGP1                                                     --------->ARR14(2)                                                     <---------ARR14(2)                                                     <---------ARR11(3)                                                     --------->ARR14(3)                                                    <---------GLK1(1)                                             ------>MYB46(1)                                         --------->ANAC58  <------ZmHOX2a(2)                     ------->GAMYB--------->ARR11(3)  --------->CCA1(2)       --------->GLK1(1)------->GAMYB --------->ARR14(2)       --------->At4g35610------>MYB83 <---------ARR11(3)    --------->LBD16 <---------MYB111(2) --------->ARR11(3)   --------->ANAC46 --------->MYB46(3) --------->AGP1<---------ICU4          <---------MYB55(2) <---------ARR14(2)  <---------LBD16--------->REM1(1)<---------ARR14(3)          <--------P >MYB52(1)     --------->ATHB12------->TEIL<---------MYB59     --------->YAB1<-----------RAV1(2) ------P      --------->ICU4 <-------TEIL--------->ANAC58     <---------ATHB12--------->LBD16   gtagatccaagagggaatgatttcacggagatgcatctacaacaaccaaattagagatcttctaatcaaaaccctgattccaggtaagagaagtctcaca  8802400                                                                             ----------->GT1                                                                           <---------YAB1      <-----                                                                        <---------YAB1   --------->TOE2(3)                                                        <----------DOF2 --------->ICU4<-----------GT1                       <---------ARR14(2)               <---------DAG2<---------At4g35610--------->TOE1(3) ------>ZmHOX2a(1)     --------->ARR14(2)  ----------->GT1    <---------AHL20(2) --------->AHL20(2) -   atcctgcaattttcaaaaaaacccaaatccattgaatcactgaaatcgaaaaaacacacttttttttatttctgatgatgagaaaaaataacctcaaaaa  8802500                                                <---------ZAT2                                             ----------->RAV1(2)                                           ------>MYB46(1)                                           ------>MYB83                                         <---------MYB111(1)                                         --------->DEAR3(1)                                         <---------MYB111(2)                                        <---------ZAT2                                        --------->ZAT2        --------->LBD16                 --------->bZIP60(2)       <---------LBD16                 <---------ATERF1(1)       <---------HSFB2a(2)             ------>NtERF2      <---------LBD16                 <---------ALFIN1     <---------LBD16                  --------->DEAR3(1)   --------->KAN4(2)                --------->LBD16   <---------ARR14(2)              --------->ANAC58   --------->ARR14(2)              --------->ANAC46                  <---------ARR11(3)  <----------TaMYB80               --------->ANAC58                 <---------CCA1(2)  --------->KAN4(1)     <---------TOE1(3)--------->AtMYB61        <----------DOF2 ---------->TaMYB80<------ZmHOX2a(1)------>NtERF2  <---------At4g35610  <----------DOF2 ----ICU4         <---------YAB1  <---------LBD16  --------->At4g35610<---------YAB1               <- ---------------->AGL1  <---------TOE2(3)<---------ALFIN1   ---------->DOF2               ---------->ID1   tggcatattcggggaaaattaggattagggttttgttccgccacctcccctgcagctaaatctaaagcctttatctttgtttcttcgtcttcgtcttctt  8802600                                                          --------->HSFB2a(2)                                                          <---------HSFB2a(2)                                                     <---------MYB46(3)                                                    <---------AtMYB61                                                  <---------ANAC46                                                 --------->ALFIN1                                                 <---------AtMYB61                                                <---------ZAT14                                               <-----------RAV1(1)                           --------                                 <---------MYB52(1)*TSS<---------ARR14(2)                   <--------                           <<<<<<<<<TBF1       --------->ALFIN1        ---------->DOF2      <--------           <------------------------ANAC81   --------->ALFIN1      --------->LBD16          <--------          <------------------------ANAC81  <---------ANAC46     ------->GAMYB               <--------        <------------------------ANAC81    <---------ANAC58    <---------ALFIN1             <--------      <---------MYB52(1)<<<<<<<<<TBF1      <---------ANAC58   <---------At4g35610          <---------LBD16 --------MYB52(1)   <-----------GT1      <---------YAB1--------->ARR14(2)         ----------->GT1   cgttgttcgttttttttttttttttcttcttcttcgtttagttatgcgtgtgtggtggttctgcaactccccaaaaagaaggaatagaaatattccgggt  8802700                                                       --------->AHL20(1)                    --------                                                       <---------AHL20(1)                    <-------                                                       <---------AHL20(2)   <---------AHL20(2)                                          <------------CBF            -------->HAHB4        <--------                                        <---------AHL20(2)           <---------YAB1         ---------                                        --------->AHL20(2)          <---------TOE2(3)       <-------- ->LBD16                                --------->AHL20(1)       <---------AHL20(2)         <-------- -ANAC55(1)                      <----------DOF2       --------->AHL20(2)   --------->AHL20(2)     <- -ANAC58                   --------->MYB52(2)         --------->AHL20(2)<---------YAB1      --------- -ANAC46             <------------CBF   <---------AHL20(1)       --------->AHL20(2)       <------ZmHOX2a(1) -ANAC58      ---------->DOF2 <-----------GT1         <---------ATHB12--------->YAB1    --------->MYB59 -LBD16 <----------DOF2    <---------MYB46(3)     ------------>CBF --------->YAB1     <<<<<<<<<MYB98   ttttttttttcttttacaaagaaaattgtttgttacttttattttattgttttccaataaattgtattttaatgataaataaatataagttaggaccatt  8802800             --------->AHL20(2)             --------->AHL20(1)             <---------AHL20(2)            <---------AHL20(2)             <---------AHL20(2)    --------->ICU4                         <---------AHL20(1)      <---------AHL20(2) <------ZmHOX2a(1)                         --------->AHL20(1)      --------->AHL20(2) ------->AGL15                             --------->ARR11(3)   <---------ICU4 --------AGL15              --------->GLK1(1)                  <---------AHL20(2) ---------AGL1        --------->GLK1(2)  <---------AHL20(2)    --------->AHL20(2)                   < -------->AGL2    --------->YAB1         <---------AHL20(1)    --------->ICU4                   <---- ---------AG--------->AHL20(2)  <----------DOF2                <---------ATHB51                ------ ---------AGL2   <---------AHL20(2)     --------->YAB1       --------->YAB1                    <----- --------TOE2(3) --------->AHL20(2)    <---------YAB1    ------->GAMYB                   <---------YAB1 -------->AGL1  --------->AHL20(2)   --------->YAB1     --------->MYB46(3)    ---------->DOF2  <-----   ttaggaatttttaaaaaaattaataatctgatttcttttttataatattttgttttcaaccaaaaataattaaaaatcagtaaagctaattttgaaagat  8802900                                      <---------SPL7                                    --------------->AtSPL8                                    --------------->AtSPL3                                 <----------DOF2                                     --------->AHL20(2)                                 <---------DAG2                                      <---------AHL20(2)                               ------->TEIL                                         --------->AHL20(2)         <-----------GT1    --------->ANAC58                                  <---------AHL20(2)      --------->ANAC55(2)   --------->ANAC58                                  --------->AHL20(2) -----------GT1            --------->SPL7                        --------------->AtSPL3 -----RVE1(1)          --------------->AtSPL3   <-----------GT1  --------------->AtSPL8 --->ARR11(3)         <---------ZAT14<---------ANAC58            <---------------AtSPL8 ----GLK1(2)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)           <---------ICU4<---------AHL20(2) ----ARR11(3)         --------->ZAT14<---------ANAC58  --------->AHL20(2) --------->AHL20(2)    -----   ttttacatatgtaacatgatgcagttcagtacgaacttttcgtaccaatttatccgttttaatatttgcagtacaaaaaattaaaaattaatagaaattt  8803000                                                                     --------->AHL20(1)                                                                     <---------AHL20(2)                                                                    --------->YAB1               <---                                                                 --------->YAB1  <---------AHL20(2)                                                           --------->At5g28300   --------->AHL20(2)                  <---------YAB1                    <------ZmHOX2a(2)<---------YAB1  --------->RVE1(1)        <---------ANAC58                            <---------ATHB12--------->AHL20(2)           ----        <---------ANAC58                   --------->YAB1 ----------->GT1    --------->AHL20(2)  <---     <----------DOF2 ------->TEIL         --------->AHL20(2)    <---------AHL20(2)   --------->CCA1(1) ------>GT1 ---------->ID1           --------->ANAC46 --------->KAN4(2)  ----------->GT1        -----   gtaaattctttcttgttgttatgaaactctttcaaatatacacaataaatatcgatcattcggtaaataataatattgaaaaaataaatatccaaatatt  8803100                             ---------->DOF2                        <---------YAB1                        <---------TOE2(3)                --------->AHL20(1)              --------->ARR11(3)                                                              =======              <---------ARR11(3)                                                              -------              --------->AHL20(1)                        ---------->DOF2               -------->HAHB4     <---------MYB52(1) <---------TOE1(3)             <---------HSFB2a(2)       <----------DOF2 ------AHL20(1) <---------AHL20(1)             <---------WOX13(1)               --------->TOE2(3) === ----->AHL20(2) <---------ARR11(3)          <---------AHL20(2)                  ===================== ------AHL20(2) --------->ARR11(3)          <---------YAB1             <-----------GT1--------->YAB1- ---->AHL20(2)<---------AHL20(1)          <----------DOF2          <----------DOF2 --------->YAB1 ---   aaatttcgttattgaaaatattttttaagattaaagcattgtgactttaattgattccaaaagtttcttctttttactatttctttaataatacagaaaa  8803200  Previous    Next  AGI:  At5g25360.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G32342.1); similar to unknown [Populus trichocarpa] (GB:ABK93715.1) Range:  from: 8799713    to: 8802651    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version