Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                         <---------ANAC46                                                       <---------LBD16                                                      <---------LBD16                                                     --------->MYB52(1)        ----------->GT1                                                 <---------AHL20(2)           ----------->GT1                                                --------->AHL20(2)          ----------->GT1         <----------ID1 --------->ATHB12      --------->YAB1              ---------->DOF2     <------ ---->YAB1             <---------YAB1        --------->AHL20(2)--------->CCA1(2)        --------->GLK1(2) -->AtLEC2      --------->YAB1         --------->TOE2(3)    ----------->GT1--------->DAG2   ---------   ataatcgtataacaacaaaaataatctcattggtaccattacatcaaataataaatagcgggaagataaacatagaaaaagtgataaaacaatctgcttc  8773400                --------->ZAT14                <---------ZAT18         --------->ANAC58       --------->GLK1(1)                                                      --------->AHL20(2)       --------->CCA1(2)                                            <---------ICU4       <---------GLK1(1)                                            <---------AHL20(2)      <---------ARR14(2)                                            -------->HAHB4                 <-      <---------ARR11(3)         --------->YAB1                    <---------YAB1             -------      --------->ARR11(3)      --------->WOX13(1)                   <---------ATHB51           <------      --------->ARR14(2)     <---------WRKY12                      --------->ICU4          <---------  ---------->DOF2            <---------WRKY38(1)              ----------->GT1 <---------AHL20(2)   -- ----DOF2--------->ANAC58   --------->WRKY18(1)<----------ID1 <---------ANAC55(2)      <---------ZAT18 >At4g35610    --------->ALFIN1 <---------ATHB12              --------->ANAC55(2)  <---------LBD16---   aagaaaaagataccccagtggacgactagggtcaatgaaaatgaaaacagagacaaatggcaattcgtaattattcacatttatttcagggtactttcgt  8773500                                <---------O2                                <---------bZIP60(2)                                <---------ANAC58                                <---------ANAC58                                <---------ANAC46                                <---------ANAC55(2)       ----------->RAV1(2)      <---------ANAC55(1)      -------->P       --------->GLK1(2)      ------>MYB83     ------->TEIL     <---------ALFIN1  <---------ARR14(2)    <---------ALFIN1   --------->ARR14(2)                           --------->At4g35610  --------->ANAC46 <---------HSFB2a(2)                              <---------At4g35610 --------ARR14(2)  --------->HSFC1(1)                             <---------ZAT14 ---->GT1----------->HVH21<---------YAB1                    --------->ANAC58                       -- ---ANAC46--------->MYB52(1)    --------->ANAC55(2)         --------->ANAC58                  <------ZmHOX2a(2) -DOF2------>MYB46(1) <---------CCA1(2)               ----------->RAV1(1)                <---------MYB52(1) ------->ARR14(2)  --------->HSFB2a(2)          ---------->DOF2   --------->ZAT14      <---------MYB46(3) ------>GLK1(1)<---------MYB52(1)        --------->YAB1   ---------->DOF2        --------->TOE2(3) --   aaatccccaacctgaccgtttctcgaatctgattacgtggcagtcatcacaaatgcccacaaaagcacttcgctgaaactcaatctcagtcgttagatca  8773600                               ------>ZmHOX2a(2)                              <------ZmHOX2a(2)                             --------->ARR14(2)                             <---------ARR14(2)                             <---------ARR11(3)                             <---------ALFIN1                             --------->ARR11(3)                           ----------->RAV1(1)                            <---------GLK1(1)                             ------>MYB46(1)                 --------->ANAC58                                         ------>MYB83                 --------->ANAC46         <---------ATHB12               --------->ANAC46        <----------DOF2    ----------->ARR10                           --------->ANAC46      -------- ------->ARR14(2)--------->ANAC58--------->LBD16                     <-----------GT1       ------>ZmHOX2a(1) ------->GLK1(2)--------->RAP2.6(3)      <-----------HVH21       --------->WOX13(1) <---------GLK1(1)   gaatccaattcttttcaatacggcaagttgagatccccaaacccatcatgtgtaaccatggttaagtcaattaacccaacacatagaaatctcctaaaat  8773700                <----------DOF2               --------->HSFC1(2)               <---------HSFC1(2)               --------->HSFB2a(1)               <---------HSFB2a(1)              ------->TEIL       --------->AHL20(2)                                <------MYB83   <--           --------->ANAC58   <---------ANAC55(2)                    ----------->RAV1(2)         ----       <-----------HVH21 --------->MYB52(2)                --------->AHL20(2)      <------MYB46(1)---     --------->DAG2    <---------MYB52(1)                 ----------->TBP     --------->ANAC58   ----    --------->DAG2    --------->TOE2(3)           <----------DOF2    --------->At4g35610    *TSS-----   ---------->DOF2   ----------->GT1              <---------DAG2     <---------At4g35610   <---------SPL7 -->DOF2   --------->ANAC58 --------->AHL20(2)---------->ID1   <-------TEIL   --------->ANAC58-------   caccaaaaaggtcacgaactttctcgttaattacataaaatgccattcttcgctttagctataaattcgtcttctgagactcgctaggtttgccgaacca  8773800                                                                                <---------ICU4                                                                            <---------------AGL15                                                                            --------------->AGL15                                                                           <-----------------AGL1                                                                           ==========================     --------->MYB52(1)                                                    ----------------->AGL3    <---------STY1(1)                                                      <-----------------AGL3 <-----------------AGL1                      <---------ARR11(3)      <---------HSFC1(2) ----------------->AGL1                      <---------AHL20(1)      --------->HSFB2a(1) -------ATHB12                               --------->AHL20(1)      --------->HSFC1(2)           <-- -->MYB46(1)                                 --------->ARR11(3)      <---------HSFB2a(1)          --- ------>MYB46(3)                         --------->HSFB2a(2)    --------->HSFC1(1)                <-- -->MYB83                      --------->ARR14(2)               <---------HSFC1(1)                --- ---->WOX13(1)                 <---------ARR14(2)               <---------HSFB2a(2)         <-------- -->MYB46(3)     ---------->DOF2   ------>ZmHOX2a(1)            --------->HSFB2a(2)         ---------   atcaccctaaggggacacttaaagagagaaacaaatccttcttctaaaatattcttcaatcttcttctcgaagcttctccaaaaatggcgattacttctt  8773900                    <---------At4g35610                    <---------GLK1(1)                    <------ZmHOX2a(2)           <------ZmHOX2a(2)          <---------ARR11(3)          --------->AGP1     --------->MYB52(1)     ----------->RAV1(1)                           <---------MYB52(1)    --------->AtMYB61  --------->At4g35610      --------->SPL7                              ---------   --------->MYB46(3)------>ZmHOX2a(2)         <---------MYB52(1)  <---------ARR14(2)     <---------ICU4 <<<<<<<ZML2        --------->GLK1(1)         <-----------HVH21    --------->ARR14(2) <------NtERF2 =======MADS_MADS  <---------ARR14(2)         <---------SPL7      --------->DOF5.7(2)------>NtERF2 -------HSFB2a(2)  ------->TEIL    <------ZmHOX2a(2)            <---------ANAC58     <---------RAP2.6(3) ------>HSFB2a(2)  --------->ARR14(2)        --------->DEAR3(1) <---------ANAC46     <-----------TGA1 -------HSFC1(1)   --------->ARR11(3)      <---------At5g28300  <---------ANAC58    <---------bZIP60(1) ------>HSFC1(1)   <-----------ARR10      <-----------GT1  <-----------RAV1(1)      --------->bZIP60(1) -------AGL15      <---------AGP1 <---------ARR14(2)    --------->GLK1(2)           --------->RAP2.6(2) ------>AGL15 --------->MYB52(1)  --------->ARR14(2)   <---------GLK1(2)        --------->SPL7     <-   ctagaaccaccagatcaaacggatctgcttcgctccgatccaaatcaccgtccggtcgattctgtggcgtttactcaaaccgtatgccgtcatcatctcc  8774000                                                                                                  ---                                                                                                 <---                                                                                                 ----                                                                                                -----                                                                                                <----                                                                                                <----                                                                                                -----                                                                                                <----                                                                                                -----                                                                                              -------                                                                                          ------>MYB46(1)                                                                                         ----------->RAV1(1)                                                                                     --------->AtMYB61                                                                                     <---------ALFIN1                                                                                  ------->GAMYB<-----                                                                                  --------->AtMYB61                                                                                  ===================                                                                                  ===================         --------->ARR14(2)                                                     -------->P------>MYB83         <---------ARR14(2)                                                     =====================     <-----------RAV1(2)                                                 --------->YAB1 --------->AtMYB61    <---------MYB52(1)                           <---------ZAT14   ----------->RAV1(1)  --------->MYB46(3)   <-----------TGA1                            --------->ETT(2)    --------->RAP2.6(2) --------->MYB46(3)   <-----------HVH21                <-----------GT1           <---------At4g35610--------->MYB46(3)  --------->ETT(2)       --------->ANAC58      <---------ETT(2) --------->RAP2.6(2) --------->MYB46(3) <------NtERF2           --------->ANAC58   --------->DEAR3(1)<---------ZAT2    ===================== >At4g35610          --------->HSFB2a(2) <---------ALFIN1     --------->At4g35610<---------MYB55(2) --------DEAR3(1)    <---------HSFB2a(2)------>ZmHOX2a(1)     --------->ZAT2  --------->MYB46(3)<----   gtcgtcgtcaggtttcgcttcttccacaagctcaagtttctcctcaccgtctacagcgtttttcagcagccacaatcagaacaaccaccaccaacacaga  8774100            --------->O2            <---------O2            <---------ANAC46            <---------ANAC58            --------->TGA1a            <---------ANAC58          <---------O2        ------>NtERF2       --------->DEAR3(1)       --------->ANAC46       ----------->HVH21  <----------DOF2  ====================bZIP_DOF  ==================bZIP_DOF --->ZmHOX2a(2) ---ZmHOX2a(2)                             --------->ANAC58 ----->CCA1(2)                             --------->ANAC58 ---->AGP1<---------TGA1a                  --------->ANAC46 -----AGP1--------->TGA1a                  <---------ANAC55(2) -----ARR11(3)                             --------->ANAC55(2) ---->ARR14(2)                           <---------TGA2(2)                  ------>ZmHOX2a(2) -------ARR10                           ----------->TGA1                   <------ZmHOX2a(2) ---->ARR11(3)     ------->TEIL         ----------->HVH21                 --------->ARR11(3) ---->ARR10------>NtERF2              <---------At4g35610                 <---------ARR14(2) ----CCA1(2)<---------TGA1a      <---------ZAT2                           --------->ARR14(2) ===================MYC_MYB      --------->ZAT2         <---------MYB52(1)<---------ARR11(3) =====================MYC_MYB    <---------At4g35610  <---------ANAC58    <---------AGP1 =====================MYC_MYB    --------->At4g35610  <---------ANAC58    --------->AGP1 ===================MYC_MYB --------->ANAC46    <---------ATHB12     --------->MYB52(1)      <------ZmHOX2a(2) -----ARR14(2)     --------->GLK1(2)  --------->At4g35610       <---------ATHB12  <-----------GT1   tctgcttctccgacgcgtgtgaatctattcacatcagctccgatgacgcaatcgtttcgttactcaatcgataacagatctatatcaccgaatcgatcca  8774200                                                 <------ZmHOX2a(1)                          --------->YAB1      <---------HSFB2a(2)                          <---------ICU4  <---------ARR14(2)                         --------->ICU4 --------->LBD16                         <---------ATHB12 --------->ARR14(2)                       --------->WOX13(1) <---------GLK1(2)                     <------------------ATHB9 --------->HSFB2a(2)     ------>NtERF2             -----                    ------>MYB46(1)    <---------ANAC46              <---------ETT(1)           <----                    ------>MYB83       --------->ANAC55(2)           --------->ANAC46   --------->KAN4(2)                  --------->TOE1(2)    <---------ANAC55(2)           ----------->HVH21<-------TEIL              ------->GAMYB           <---------LBD16          <---------ZAT18    ------>ZmHOX2a(1)             --------->MYB46(3)     --------->GLK1(2)          --------->ZAT18  ----------->RAV1(2)             <---------MYB111(2)   <---------GLK1(2)           --------->ZAT14------->TEIL     ------             <---------MYB52(2)    <---------ARR14(2)      ------->TEIL    --------->ANAC58  --------             <---------MYB55(2)    --------->ARR14(2)  <---------ARR11(3)  --------->ANAC58<---------LBD16   tcgctgtttcttccaacaaacctagcaatcatcacaagattccggattcgaggagaagatgtatgtgctctccgacaacgcatcctggttcattccggtg  8774300  Previous    Next  AGI:  At5g25280.1    Description:  serine-rich protein-related. similar to serine-rich protein-related [Arabidopsis thaliana] (TAIR:AT5G11090.1); similar to serine-rich protein [Brassica rapa] (GB:ABL97972.1) Range:  from: 8773792    to: 8775490    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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