Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                     --------->ANAC58                                   --------->ANAC58                                  ------>MYB83                                 <---------ALFIN1       --------->At4g35610                      ------>ZmHOX2a(2)                 <---------ZAT2                     <------ZmHOX2a(2)                  --------->ZAT2        <---------LBD16 --------->LBD16                 <---------At4g35610    <----------DOF2  --------->CCA1(2)                 ----------->RAV1(1)  --------->LBD16    --------->ARR14(1)               <-----------RAV1(2) ---------LBD16     --------->ARR14(2)             --------->ARR14(2) ----->ZmHOX2a(2)   <---------ARR11(3)         <---------LBD16                               -------- -------ARR14(2)    --------->ARR11(3)       <---------ARR14(2)                --------->MYB46(3) ------>ARR14(2)    <---------ARR14(2)       --------->ARR14(2)     ------->TEIL         <---------MYB59 >ARR14(2)          --------->AGP1------>MYB46(1)--------->LBD16   <---------CCA1(2)    --------->ANAC55(2) -ARR14(2)--------->LBD16       --------->MYB46(3) <---------ARR14(2)  <----------DOF2  <---------ANAC55(2)   gatccggtttaccggaatgcaagatccgagtaaacccacccatttcagaaccgggtccagcagaagcttgaatctttttgaaccaatagtacataactct  8756600                                                                                               ------                                                                                              -------                                                                                            <-------PIF5                                                                                            ------->MYC4                                                                                            ------->PIF5                                                                                            ------->MYC3                                                                                            <-------MYC3                                                                                            <-------MYC4                                                                                            ------->MYC2                                                                                            <-------MYC2                                                                                           --------->TGA1a                                                                                           <---------TGA1a                                                                                           <---------PIF3(3)                                                                                           --------->PIF3(3)                                                                                           --------->bZIP60(2)                                                                                           <---------O2                                                                                           <---------ANAC46                                                                                          ------>NtERF2                                                                                         <---------ALFIN1                                                                                        <------NtERF2                                                                                       <-----------HVH21                                                                                       --------->ABI4(1)                                         <---------ANAC46                              ------>NtERF2                                       ===================bZIP_DOF                     <---------ATERF1(1)                                       <---------ANAC46                               --------->ANAC58                                       ===================bZIP_DOF                    --------->RAP2.3(2)                                       <---------ANAC58                               --------->DREB2C(2)                                       --------->TGA1a                                --------->RRTF1(2)                                       <---------O2                                   --------->RRTF1(3)                                       <---------TGA1a                                --------->ANAC58                                       <---------ANAC58                               --------->RAP2.3(3)                                     ------>NtERF2                                    --------->RAP2.6(2)                                     --------->ABI4(1)                                --------->ANAC46                                    --------->ANAC46                                  --------->DEAR3(1)                                    --------->DEAR3(1)                                <---------ATERF1(2)                                   --------->DEAR3(2)                                 --------->ATERF1(2)                                   --------->ATERF1(1)                               --------->ATERF1(1)                                   --------->MYB46(3)                                --------->RAP2.6(1)                                --------->ATERF1(1)                                  --------->ERF1                                ----------->HVH21                                    --------->RRTF1(1)                                <------NtERF2                                        --------->ORA47(2)                               <-----------HVH21                                     --------->RAP2.3(1)                               <-----------TGA1                                     --------->At4g35610                               <---------ATERF1(1)                                  --------->LBD16                              --------->bZIP60(1)                                   <---------ATERF1(1)                              --------->DEAR3(1)                                    ------>NtERF2                              --------->RAP2.6(2)                                  --------->ANAC46                              <---------bZIP60(1)                                  --------->DEAR3(1)                              --------->RAP2.3(3)                                 --------->ATERF1(1)                             <------NtERF2--------->REM1(2)                       --------->MYB46(3)                             --------->RAP2.3(1)                                 <------ZmHOX2a(2)                            <---------ATERF1(1)                                 --------->ARR14(2)                            ------>NtERF2--------->ALFIN1                       <---------ARR14(2)                           --------->ANAC58                           <---------MYB52(1)----------->HVH21                           --------->ANAC58                    <---------At5g28300------>ZmHOX2a(2)                           --------->ANAC46                ==========================================bZIP_DOF                 --------->ANAC58 <---------At5g28300      ==============================HOX2a_HOX2a                 --------->ANAC58 <---------ATERF1(1)      =============================HOX2a_HOX2a                 --------->ANAC46<---------ALFIN1          <----------DOF2   <---------HSFB2a(2)                <---------LBD16------>NtERF2               ------>ZmHOX2a(1)<---------LBD16--------->O2 ->ZAT6 <---------ZAT6   --------->At4g35610   ---------->DOF2<-----------GT1--------->HSFB2a(2)   acattgccaagtgttatagacggaatcagacgccgtcaccgccgtgtggaaaagtcttatccttttaccatcgttgtttctggatccgccgccacgtggt  8756700                                      =================================HOX2a_HOX2a                                      <------ZmHOX2a(2)                                     <---------ARR14(2)                                     --------->ARR14(2)                                     --------->ARR11(3)                       --------->MYB52(1)                      --------->GLK1(1)                      <---------GLK1(1)             <---------WRKY38(1)     <---------ARR11(3)                        --------->ICU4             <---------WRKY12 ===============HOX2a_HOX2a                     <---------At4g35610            --------->WRKY18(1)    ----------->ARR10                      --------->LBD16           <-----------HVH21  ================HOX2a_HOX2a                <---------ANAC46     --------->ATHB12 --------->CCA1(2)          --------->ANAC58       --------->At4g35610    ----------->HVH21--------->ARR11(3)================================HOX2a_HOX2a --->At5g28300       <---------ARR11(3)------>ZmHOX2a(2)        <------ZmHOX2a(1) <---------YAB1 ---->GT1  <--------ZAP1      <------ZmHOX2a(1)  --------->ANAC58       <---------LBD16        ------   aattcgatgactgggtcaatggagatatcggaggaagaagatcggcctgggaagccttgtttgagaggagcattagcggagatgatgatgttgtaagtga  8756800                                                      <---------At4g35610                                                      ----------->RAV1(2)                           <------MYB46(1)       --------->ANAC58                           <------MYB83          --------->ANAC58                          <---------MYB46(3)   --------->MYB46(3)                  <---------YAB1             <---------ALFIN1       ------->GAMYB     --------->ALFIN1    --------->AtMYB61        <---------TOE2(3)           ---    --------->MYB52(1) <---------O2         --------->ANAC46          <---------YAB1         <<<<<<<< --->ATHB12     --------->CCA1(2)  ---------->DOF2    --------->At4g35610                ---------->ID1   ttagagcaacggagagagttatgagaagtgggtagaacaaagttccaccacaacccatctgagagagagattgagattgaaggaagagtttgttcttctt  8756900                                             <------MYB83                                             <------MYB46(1)                                            <---------MYB46(3)           <---------MYB52(1)              <---------MYB55(1)                 <-----------TBP       <          <-------GAMYB         <---------At4g35610                         <----------DOF2      <---        <------NtERF2        <---------At4g35610   *TSS                <----------DOF2          <----     <------NtERF2     <<<<<<<<<TBF1       <--------P <------ZmHOX2a(1)<---------GLK1(1)        <---- ------->DOF2       <<<<<<<<<TBF1         <---------ZAT2              <---------ANAC58          <---- <TBF1<---------DEAR3(1)  <<<<<<<<<TBF1   <-------GAMYB               <---------ANAC58      <--------   caaagtcgtcgtcgttgtcttcttcttcttcttctgcttatgccagttggtgaagaggatgccgaagaaatggctttcctttttataagttctaaattgc  8757000         <---------AHL20(2)       <----------DOF2 -----------GT1                                       ----------->GT1                               - -------DOF2                                       ---------->DOF2               -------------------- -----ANAC58        <---------ANAC58          <-----------GT1     <---------ANAC58             <----- -----ANAC58        <---------ANAC58    <---------------AGL15     <---------ANAC58             <----- -----ANAC46        <---------ANAC46    --------------->AGL15     <---------ANAC46<-----------GT1   < ----CBF --------->AHL20(2)          <-----------GT1 ----------->GT1  --------->GLK1(1)       -------   ttttactctctttaattttgttccctgtttgatgaaattttactatttttactaaaagttaaaacatttcgggtttcttaagtttttcggtttagttcgg  8757100                                <------MYB46(1)                      <---------AHL20(2)                    <---------AHL20(2)              --------->MYB46(3)<---------ANAC46                                          ------>ZmHOX2a(2)              <---------ATHB12  ----------->GT1                                          <------ZmHOX2a(2)              <---------MYB55(2)<------MYB83                                            <---------ARR11(3)             --------->ANAC58  --------->MYB111(1)                                      --------->ARR14(3)             --------->ANAC58  --------->MYB59                                          <---------ARR14(3)   --------->YAB1   <---------YAB1                                                      --------->ARR11(3) -------->HSFB2a(2)<---------AHL20(1)                                                   --------->ARR14(2) --->TaNAC69(2)    --------->AHL20(2)                                                   <---------AGP1 -MYB46(1)   -------->P<---------YAB1                                                   <---------ARR14(2) -MYB83      ------>MYB46(1)   <---------AtMYB61                                        --------->AGP1 ---------HSFB2a(2)--------->YAB1     <---------AHL20(2)                          <-----------GT1 -->MYB59    ------>MYB83      --------->MYB46(2)<-------TEIL              <---------ANAC46 ---------   ttctataagagtgccaaccaatattattttggtttggtatataatacaaggttcatgctctaaaattgcaatacgttgagggaattacaagatcttgaaa  8757200                                                                         =====================RAV                                                                   <-----------------AGL2                                  <-----------GT1                  <-----------------AGL1                                ------>ZmHOX2a(2)         <---------YAB1 <-----------RAV1(2)                               <------ZmHOX2a(2)         <---------ARR11(3)                              --------->AGP1          --------->AHL20(2) <---------LBD16                              --------->ARR11(3)      --------->YAB1<---------ANAC58           <-----                              <---------ARR11(3)      <---------ICU4<---------ANAC58 --------->ETT(1)                       --------->MYB52(1)<-----------GT1 --------->ARR11(3)         ---------->ID1          --------->DAG2     --------->GLK1(1)  ----------->GT1    ----------------->AG ---------->DOF2 -->GT1  ---------->DOF2    ----------->ARR10---------->DOF2     <-----------GT1  <-----------RAV1(1)   atacacaaacaaaaagtcatcaaaacaactgagatcttactatttaccaaaggtaataatatccttgtttccgtttcagggtatttgtcgcaaagttgtg  8757300                           <---------At4g35610                           --------->GLK1(1)                      <---------LBD16                <-----------RAV1(1)                <---------HSFB2a(1)                --------->HSFB2a(1)           <---------TOE2(2)           <---------TOE1(2)                                                                    <----         --------->TOE1(2) --------->At4g35610                                             --------->DEAR3(1)        <---------ANAC58   <---------GLK1(1)                                              --------->ANAC46        <---------ANAC46   --------->ZAT2                                              --------->ETT(2)        <---------ANAC58   <---------ZAT2                                              --------->ZAT18     <----------DOF2 <---------ANAC46                    ----------->GT1        <---------AHL20(2)    <---------ANAC58 <---------ANAC58                   ----------->GT1        --------->AHL20(2)    <---------ANAC58 <---------ANAC58              --------->TOE1(2)           <---------AHL20(2) ----AtMYB61 <------ZmHOX2a(1)                  <-----------GT1                <---------AHL20(1)   <   gtttttgctttcgtaggaatgttgctcggagctctgttagaatgacaaattaacctgcaagttaaaaatgctcaaaaccaatttttttgtccaccgaaga  8757400                               --------->TOE1(3)                                                   --         ----------->RAV1(1) <---------TOE1(3)                                                   <---         <---------ALFIN1    <---------TOE2(3)                                                   <---   --------->TOE2(3)     --------->TOE2(3)                           ------>ZmHOX2a(1)           <--- -----ZAT6              <---------ICU4                      ------>ZmHOX2a(1)        <---------YAB1-- ---------DOF5.7(2)    --------->ICU4                    ---------->ID1      ---------->DOF2     <---   gttaacctcgaccacatttattgtaaacattaagcttaagtgttccattggagaaacttgtccttgtggtccttaaacacaaagtctattatttggctac  8757500  Previous    Next  AGI:  At5g25265.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G25260.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44302.1) Range:  from: 8754556    to: 8756951    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version