Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                               ------>ZmHOX2a(2)            <------ZmHOX2a(2)          --------->ANAC55(2)  <------ZmHOX2a(2)           --------->ARR11(3)         <---------TOE1(3)    <---------ARR14(2)           <---------ARR11(3)      --------->DOF5.7(2)     --------->ARR14(2)          ------->GAMYB           <----------DOF2          --------->ARR14(3)        <---------TOE2(3)      ------>NtERF2               <-----------ARR10        <---------TOE1(3)     --------->DEAR3(1)           <---------AGP1       <-----------GT1      <---------At5g28300            <---------ARR11(3)     --------->DOF5.7(2)  --------->ZAT18                  --------->ARR11(3)    <----------DOF2       --------->ZAT14           ---------->DOF2                                <-   --------->TOE2(3)  --------->DAG2  <---------TOE2(3)    <---------ARR14(3)                 ------- ---------DOF2       ---------->DOF2 <---------DOF5.7(2) ----------->ARR10               <-----------GT1 -----TOE1(3)------>ZmHOX2a(2)--------->DREB2C(2)--------->YAB1                      ---------------- --DOF2<---------DOF5.7(2)<---------ZAT14       <---------YAB1<----------DOF2        <----------DOF2-   gctttcctttaacgatcttggagaaaagttcaccgcctttaacgtattccatgataaagaagatctttgtttttgtagccatgacttcttttaactcaac  8658900                                 ------>ZmHOX2a(2)                                --------->GLK1(1)                                <---------GLK1(1)                                <------ZmHOX2a(2)                               --------->ARR11(3)                               <---------ARR11(3)                                           <--------                          <---------WOX13(1)                                            --------->ARR11(3)     <---------AtLEC2   <---------ICU4                                                <---------YAB1 --------YAB1           --------->ATHB12                                   --------->ARR11(3) -->MYB52(1)           <---------YAB1                      --------->TOE1(3)  <----------DOF2 ----->WRI1            --------->ICU4                 --------->YAB1       <---------ARR11(3)-------- -------->ATHB12     --------->YAB1       --------->ATHB12 --------->TOE2(3) ------>ZmHOX2a(2) <-----   gatgtttggatgacgaacaagtctcatgattgagatctctcgtttgatttgttccatcataccttcacgtttgacttgatctttgttgatgattttgatt  8659000                                               <---------KAN4(1)                                               --------->KAN4(1)                             <---------RAP2.6(3)               <-------GAMYB --------->LBD16   --------->HSFC1(2)              <---------MYB46(3)               <---------HSFC1(2)             <--------P      --------->At5g28300--------->KAN4(2)            <-------GAMYB   ----------->GT1    <---------HSFB2a(1)                              -----            <---------MYB52(1)        <----------DOF2            <---------HSFB2a(1)            -----    <----------DOF2    <----------DOF2<---------DAG2             --------->HSFB2a(1)            ----- -YAB1     --------->LBD16  --------->ANAC55(2)--------->HSFB2a(1)  ------>MYB83    <---------HSFB2a(2) ->ATHB12<---------LBD16   ---------->ID1     <---------KAN4(2)<-----------GT1      --------->HSFB2a(2) ----WOX13(1)<---------MYB55(1)    <-----------GT1   <----------DOF2------>MYB46(1)<---------ANAC46   gcaacgctttctccggttgttatctctttgccgtaataaacttttccgaatgttcctttgcctagtaaccttcccatctcgtatttcgcgaagagaacac  8659100                                         --------->MYB46(3)     <---------MYB46(3)                <---------DOF5.7(2)     <-----------RAV1(1)            <------MYB46(1)     <---------REM1(1)           <---------MYB52(1)  <---------MYB46(3)          <------NtERF2                                                 <-------- ---->ANAC58                 ------>NtERF2                                           --------->DAG2 < ---->ANAC46         xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                           ---------->DOF2-- ---->ANAC58     ------>ZmHOX2a(1)  <------MYB83          --------->MYB52(1)     ----------->GT1   <-   gaagttgttgttgctcttcctccattgtaggggccgattggtaacgactgtctgggtgaaaaacggatgagtgatttaagagagggtaaagtttaagttt  8659200      ------->MYC3                                                       --------->YAB1      <-------MYC3                                                      --------->ICU4 ------>ZmHOX2a(2)                                             <------MYB83 -TOE2(3)                                                  --------->ATHB12 ------ZmHOX2a(2)                                ---------->TaMYB80 <---------YAB1      <---------MYB46(3) ------->ARR14(2)                         <---------ARR14(2)   <------MYB46(1)         --------->ALFIN1 --------ARR14(2)                         --------->ARR14(2) <---------WOX13(1) >>>>>>>>>TBF1   ggatcccatgtgtatatacagaagtagaatgagtccatattcagtatatggaatatgagatagattggtgatgaatgatgaagaagaaggtggtttagtt  8659300                                                       --------->ARR11(3)                                                       <---------ARR11(3)                                                       <---------AHL20(2)                                                       --------->AHL20(1)                                                ----------->GT1                                            <---------ALFIN1                                          --------->ATERF1(1)                                          <------NtERF2<---------AHL20(1)                                          ------>NtERF2--------->AHL20(2)                                         ------>NtERF2--------->AHL20(2)                                         <---------ATERF1(1)                                         --------->RAP2.6(2)      <-------GAMYB                                         <---------RAP2.3(1)     ----------->GT1          ---------->DOF2                         *TSS           <---------RAP2.6(2)  <---------ANAC46 --------->ARR11(3)                 <------ZmHOX2a(1)      <---------DEAR3(1)   <-----------RAV1(1) <---------ANAC55(2)             ---------->DOF2           --------->ATERF1(1)<---------AHL20(2)  <---------ARR11(3)    <   ttataagaaatgaagcaaaggacttgagaggggatgtatgaggcggccacttgtaaatatattatgtgggttaattaagagatacttaagaagaaagaga  8659400          <-----------RAV1(1)      ------------>CBF                                                      <---------AHL20(2)      <---------YAB1                                                        <-----------GT1     -----    --------->YAB1                                                       ------->TEIL <----------DOF2   <---------YAB1           <-------TEIL              <-----------GT1 <---------ANAC55(2)  <---------AHL20(2) ---------YAB1<---------LBD16                      <---------YAB1     --------->ANAC55(2)  --------->AHL20(2)   ctcttattatcaatgctgcggttttagagatgcaagtttttatactatgggttatttttctctctatacaatatgtatttacataagtcttttttaaata  8659500                  <---------TOE2(3)             <---------YAB1            <---------AHL20(1)                                                                    ---            --------->AHL20(1)                                                                  -----            --------->AHL20(2)                                                                 <-----            <---------AHL20(2)                                                              ---------           --------->AHL20(2)                     <---------DAG2                         --------->ICU4          <---------YAB1              <----------DOF2                                 --------->AHL20(2)        <---------ICU4     <---------AHL20(2)     <----------DOF2                  <---------AHL20(2)       --------->ICU4  <---------AHL20(2)  <-------GAMYB                          --------->AHL20(2)       --------------->AGL15 --------------->AtSPL8                            <---------ZAT6<------- ------>GT1--------->YAB1 --------->AHL20(2)<---------MYB52(1)        <---------TOE2(3)--------->YAB1   gtaaatatacttattatattaacatatatttaatgtccctctttccgttacacttttcagcattgaatttttaagtttatagtattaaataaaaattaat  8659600                                       --------->YAB1                                    -------->HAHB4                                      <---------ICU4                                    <---------ICU4                                      --------->YAB1                                    <--------ATHB1                                      -------->HAHB4        ------>MYB46(1)             --------->ATHB51                                   <---------ATHB51        ------>MYB83                --------->YAB1   <---------AHL20(2)                --------->ICU4      <---------MYB59              <---------ATHB51  --------->ATHB12                  <---------YAB1   <-----------GT1                 <---------YAB1   --------->AHL20(2)               --------->YAB1 <---------MYB52(2)                --------->ICU4<---------------AGL15     <---------At5g28300 ------>AHL20(2)              --------->YAB1     --------------->AGL15     <---------DOF5.7(2) ------ ------>GT1                --------->TOE2(3)  <-----------GT1    <------ZmHOX2a(1)  <---------ATHB12 ----TOE2(3)              ----------->GT1 <-----------GT1       ----------->GT1     <---------ATHB51 >AHL20(2)     <---------AHL20(2)<---------ICU4 ----------------->AGL3    <-----------GT1      ------ --AHL20(2)   --------->AHL20(2) --------->YAB1-------->P  <---------REM1(1)  --------->ORA47(1)   gtaaataaccaaactattttatatagaaatgttaataataattgtaacttaccatttattggtgtaaggaaatttgttaccgtccaataataatggcagg  8659700                                                                                --------->YAB1                                                                               <---------AHL20(2)        --------->ZAT18                                                       --------->AHL20(2)        <---------MYB46(3)            --------->TOE1(3)                    --------->ICU4       --------->ALFIN1               --------->TOE2(3)                    <---------YAB1     <---------ANAC58               ------>MYB83                        <---------YAB1     <---------ANAC58               -------->P                    --------->AHL20(2)    <---------MYB46(3)              ------>MYB46(1)<---------AHL20(2)  --------->ARR11(3)   --------->ALFIN1         --------->HSFB2a(2)   --------->AHL20(2)   <---------ARR11(3) <-----------RAV1(1)        <---------HSFB2a(2)   <---------AHL20(2)  --------->CCA1(1) --->ANAC58               ------>ZmHOX2a(1)   <---------YAB1    <---------TOE2(3)  --------->YAB1  <- --->ANAC58    <---------ATHB12   <---------MYB59<---------WOX13(1)   --------->RVE1(1)           ---   ctaatgtgggtgggcaaatgatgcaatcctctagagcctaccttaattttgattaatttttgatttaagaaaatatcatttttaataagagttgtataga  8659800  Previous    Next  AGI:  At5g25110.1    Description:  CIPK25 (CBL-INTERACTING PROTEIN KINASE 25); kinase. similar to CIPK5 (CBL-INTERACTING PROTEIN KINASE 5), kinase [Arabidopsis thaliana] (TAIR:AT5G10930.1); similar to CBL-interacting protein kinase [Gossypium hirsutum] (GB:ABP35583.1); contains InterPro domain NAF; (InterPro:IPR004041); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) Range:  from: 8657629    to: 8659325    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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