Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                    <--                                                                                                  ---                                                                                                  <--                                                                                             ------>MYB46(1)                                                                                             ------>MYB83            <---------ARR14(2)  --------->ARR14(2)                                           --------            ------->TEIL        <---------GLK1(2)                                           ---------            --------->GLK1(2)   <---------ARR14(2)                                         <---------MYB46(2)            --------->ARR14(2)------->GAMYB                                           <---------ANAC58           <---------GLK1(2) --------->ANAC58      ------->GAMYB                      <---------ANAC58      --------->MYB52(1)     --------->ANAC58    --------->RAP2.6(3)                  <---------ANAC46 ------CCA1(1)             --------->MYB52(1)   --------->MYB52(1)               <------MYB46(1) <--- ------RVE1(1)           <---------MYB52(2)   <---------MYB52(2)                 <------MYB83-------- -----ARR11(3)      <---------ANAC55(2)    --------->WRKY38(1)                   <---------MYB46(3) ---->ARR11(3)      --------->ANAC55(2) <---------MYB46(3)                   <---------MYB46(3)  <---   tatttgactaactgaatctgatacttgactaacggaatcggattgttgactaacggcatcatcttcgtcttcgtcgagattgttggtttcgtgcctaccg  8643100                                             --------->TGA1a                                             <---------ANAC46                                             <---------TGA1a                                             <---------ANAC58                                             <---------ANAC58                                             <---------bZIP60(1)                                           <---------TGA2(2)                                           --------->MYB52(1)                                          ----------->HVH21                                        <---------At4g35610                                        <---------O2                                        --------->At4g35610                                        --------->O2                                        ----------->RAV1(2)                                        --------->TGA1a -------ARR14(2)                        <---------ANAC55(2) ------>ARR14(2)                        --------->ANAC55(2) -------ARR11(1)  --------->At4g35610 <---------ALFIN1 ->MYB52(1)      --------->RAP2.6(2)<-----------HVH21           <------NtERF2             ------>NtERF2 >MYB55(1)       --------->DEAR3(1)----------->HVH21           --------->LBD16 <---------ZAT6 ------CCA1(2) <---------At4g35610<-----------HVH21           --------->DEAR3(1)--------->YAB1 >P   --------->TOE2(3)           --------->LBD16   <---------ICU4  <---------WOX13(1)------->GAMYB < ------ARR14(1)<---------ZAT2  ------>ZmHOX2a(1)<-------TEIL <---------LBD16 ----------->GT1     ----   tatccaattcttaatccagccgctctcttcttcctccgtgacacctgacgtccataattcttcgccggagattgatgagtagtgataactgcctccatcg  8643200      <------MYB83      <------MYB46(1)     --------->MYB111(1)     <---------AtMYB61     <---------MYB46(3)     --------->MYB111(2)                                              --------->ARR14(2)          <--     <---------DEAR3(1)                                               <---------ARR14(2)         <---     --------->MYB46(2)                                               --------->ARR11(3)         ----    <--------P <---------LBD16<---------MYB52(1)        ---------->DOF2     <---------ANAC46 <-------    <---------MYB55(1)       --------->TOE2(3) --------->GLK1(2)      <---------ARR11(3)  ----------- <---------TOE1(3)          --------->YAB1    <---------GLK1(2)  --------->LBD16         --------->LBD16 -----------RAV1(2)        <---------ATHB12   --------->ARR14(2)--------->ANAC46  <---------REM1(1) ----->At4g35610 --------->LBD16              <---------ARR14(2)--------->ANAC55(2)    <-------------   gctcaggttggtgttgaaccggagtcacaatcgttaagtctgaaaacagattctcgtccaaagcctccgtaatatctggctgagaagtagccgtgatcag  8643300                                                     <------NtERF2                                                    ------>NtERF2                                                   --------->DEAR3(1)                                                   --------->RAP2.6(2)                                                   --------->RRTF1(2)                                                   --------->RAP2.3(2)                                                   --------->RAP2.3(3)                                                   <---------ALFIN1                                                   --------->RRTF1(3)                                                   --------->DREB2C(2)                                                  --------->RRTF1(1)                                                  --------->ATERF1(1)                                                  --------->ORA47(2)                                                  --------->RAP2.3(1)                                                  --------->ERF1                                                  --------->RAP2.6(1)                                                  --------->DEAR4(2)                                                 --------->LBD16                                                 ------>NtERF2                                                 --------->ABI4(1)                                                 <---------At4g35610                                                <---------ALFIN1                                                --------->ANAC46                                             --------->DEAR3(1)      --------->ANAC46                      --------->ATERF1(1)    ------>NtERF2                           <------NtERF2    <---------ATERF1(1)                    <---------ATERF1(1)   --------->DEAR3(1)                   <-----------HVH21  <------NtERF2                        --------->ALFIN1  --------->ATERF1(1)                  <-----------RAV1(1) ------>NtERF2                     <---------YAB1--------->At4g35610 <---------RAP2.3(1)            ----------->HVH21<---------ATERF1(1)             <---------At4g35610 <---------ATERF1(1)           --------->LBD16  --------->DEAR3(1)               --------->At4g35610 ---------HVH21               <---------ANAC58 --------->ATERF1(1)           <------NtERF2         -- --------RAV1(1)              <---------ANAC46<---------ATERF1(1)           <---------DEAR4(2)   ---- ----->ALFIN1                 <---------ANAC58------>NtERF2                <---------DEAR3(1)    <--- --YAB1           <--------P <-----------------------TaNAC69(2)            --------->ALFIN1      <--- >HVH21<-----------HVH21     <------NtERF2 ------>NtERF2                   <---------ANAC46   ------- ----------TaNAC69(2)     <------ZmHOX2a(1)<---------RAP2.3(1)            <---------ABI4(1)  <-------   tgtcgcctccgtcacatctggttgagaaggagccgtgatcagtgtcgcctccgccgccttggtttcttcagattgaggcggtgagcttaccttgctgtca  8643400                                                                             --------->DEAR3(1)                                                                            <------NtERF2                                                                           <---------ATERF1(1)                                                                           --------->ABI4(1)                                                                           --------->LBD16                                                                          <---------DEAR3(1)                                                                          --------->RAP2.3(3)                                                                          --------->DEAR3(1)                                                                          <---------ATERF1(2)                                                                          --------->ATERF1(2)                                                                         --------->RAP2.3(1)                                                              ------>NtERF2------>NtERF2                                                             --------->DEAR3(1) <------ZmHOX2a(2)                                                            <------NtERF2--------->DEAR4(2)                                                            --------->ATERF1(1)<-----------ARR10                                                           ------>NtERF2 --------->ORA47(2)                                                           <---------ATERF1(1) --------->ARR14(2)                                                          --------->ANAC46--------->RAP2.3(2)               --------->LBD16                       <---------ARR14(2)  --------->ERF1         <----             <------NtERF2                           --------->ARR14(2)  --------->ATERF1(1)   <-----           --------->ANAC58                          <-----------ARR10  <---------ATERF1(1)    ------ ------->LBD16<---------DEAR3(1)                    <---------CCA1(2)  --------->DEAR3(1)     *TSS ----->At4g35610      ---------->DOF2          <---------ARR14(2)  --------->MYB46(3)    --------->MYB46(3) ------LBD16------>NtERF2                      --------->GLK1(2)  ------>MYB83 <---------ARR14(2)---- ------At4g35610 ----------->GT1               --------->ARR14(2) ------>MYB46(1)        <---------ATHB12 ---->HVH21<---------DEAR3(1)                 --------->GLK1(1) --------->AtMYB61      --------->WOX13(1) ----HVH21 --------->ANAC58  <---------ALFIN1 <---------GLK1(1)--------->MYB46(3)------>ZmHOX2a(2)  -   ccggagaactgagacgccggtgtaaaaagctccatcccttcgaacagggaatccatatcgtcgccaccatccatcgccgccgatctgatcaatcaccgat  8643500                                          --------->AHL20(1)                                          <---------AHL20(2)                                         <---------AHL20(2)                                       --------->YAB1                             <--------ATHB1                                                     =====                             <---------ICU4                                                     -----                             -------->HAHB4                                                    ------  ------>ZmHOX2a(2)         --------->ICU4<---------AHL20(1)                                  ------- --ZmHOX2a(2)               <---------ATHB51                                                  <------ ----ARR14(2)             --------->YAB1 --------->AHL20(2)                      <---------ANAC58 --->ARR14(2)           --------->AHL20(2)--------->AHL20(2)                     <---------ANAC58 -->ZmHOX2a(2)        <----------DOF2--------->AHL20(2)                     <---------ANAC58 -------- -------->AGP1    <-----------GT1--------->YAB1<-----------GT1              <---------ANAC58 <-------   ctgatctacatttgagtttgaaaccttttaataattcataaaaataaattcactagtttaatgggccttaaatgtttgacttgtcttgggcctattaacg  8643600                          <----------DOF2                        <---------DAG2                   <-----------TGA1                   <-----------HVH21                  <---------bZIP60(2)                  --------->O2                  --------->bZIP60(1)                  <---------bZIP60(1)                                                             ---                  <---------O2                                                                    <--                  --------->TGA1a                                                       <---------ATERF1(1)                  --------->bZIP60(2)                                                   ------>NtERF2                  --------->ANAC46                                                     --------->DEAR3(1)                  --------->ANAC55(2)                                                  <---------DEAR3(1)                  --------->ANAC58                                                    --------->ATERF1(1)                  <---------TGA2(1)                                                   <------NtERF2                  ===================bZIP_DOF                                        <---------ATERF1(1)                  --------->ANAC58                                                   <---------ERF1                  --------->TGA2(1)                                                  <---------RAP2.3(1)                  <---------TGA1a                                                   --------->ETT(1)                 ----------->STF1                                                   <---------At1g77200 ===========================MYC_MYB                                                 <---------DEAR3(1) -->GAMYB        <-----------STF1                                                   <---------RAP2.3(3) --->MYB46(3)   <---------TGA2(2)                                    <---------ICU4 <---------DEAR4(1) -->RAP2.6(3)   >>>>>>>>>>>AtbZIP1                            ----------->GT1       <---------DREB2C(2) ---At5g28300  ----------->TGA1      <---------ZAT6         ---------->DOF2        --------->RAP2.6(3) ->MYB52(1)  <---------At4g35610 <------------CBF    <---------At4g35610     <---------ALFIN1    <--- ----GT1     <---------ICU4    --------->LBD16       --------->At4g35610   *TSS   <-----------HVH21   gcccatatttgataatgctgacgtcactctttcccgattgtgttagcgcctcttcatctccataaagataaaaatttcaacacttgtcggcgactcagag  8643700              ------>MYB83            --------->TOE2(3)            <---------MYB59                       <-----------GT1         --------->GLK1(1)                    <---------ARR14(2)      --------->LBD16                         <---------GLK1(2)    <---------LBD16                           --------->ARR14(2)  --------->MYB52(1)                        --------->LBD16                                      <--- ------>GLK1(2)       <-----------GT1     <---------LBD16                                   --------- ---------ARR10     <----------DOF2      ------>NtERF2                                   --------->ALFIN1 ------GLK1(2)------>MYB46(1)           --------->ANAC46      <---------GLK1(2)         <------ZmHOX2a(1)   aatctaaccggaaacctaatctctttacctctgagtctatctacgccggatttttcaattttcaaattctcgattcgattgaagatggaaggaggtggag  8643800                --------->ALFIN1              --------->ZAT2              --------->At4g35610              <---------ZAT2             --------->ARR14(2)             <---------ARR14(2)            <------ZmHOX2a(1)          --------->ALFIN1         <------NtERF2       --------->ALFIN1       <---------ANAC46        --------->LBD16       <---------DEAR3(1)     --------->ANAC55(2)      <------NtERF2           --------->HSFB2a(2)      <---------LBD16         <---------HSFB2a(2)      --------->ATERF1(1)     <---------ANAC46                             --------->ANAC46     <---------RAP2.3(1)      <---------ANAC55(2)                          --------->ANAC58    <---------DEAR3(1)     <---------ARR14(2)                              --------->ANAC58      ----    <---------RRTF1(3)     --------->ARR14(2)                          --------->TOE2(3)         <---    <---------RAP2.6(2)  <---------MYB46(3)                          ------->TEIL          <---------ZAT2    <---------RAP2.3(2) --------->ALFIN1                          <---------ANAC58         --------->ZAT2   --------->At4g35610  <---------AtMYB61                         --------->ANAC55(2)    <---------ALFIN1  --------->MYB52(1) <------ZmHOX2a(1)                            <---------ANAC58     ----------->RAV1(1) ---ZmHOX2a(1)<---------At4g35610                 --------->At5g28300--------->SPL7 --------->ANAC58< >ALFIN1 --------->ATERF1(1) <---------LBD16     ----------->GT1  <---------ANAC46  --------->ANAC58-   gaagtagcggcggaggagctggaggagtggttccggaatcagcgattgaagcggtgaatcaaacacttgcgtacctcaaggaactgaagccacagcttga  8643900                                                                                       <---------ALFIN1                                                                                       --------->ZAT6                                                                                       --------->AtMYB61                                                                                      --------->MYB46(3)                                                                            --------->ZAT2             ----------->RAV1(2)                                         <---------ANAC58             --------->At4g35610                       --------->ZAT2    <---------ANAC58             <---------At4g35610                       <---------ZAT2   <---------STY1(2)         <----------DOF2                        ---------->DOF2         --------->STY1(2)   --------->At4g35610                      --------->YAB1            ------->PIF5   ------>NtERF2 <---------GLK1(2)                         <---------ATHB12           <-------PIF5  --------->RAP2.6(2) <---------ARR14(2)                   --------->AtLEC2 --------->At4g35610  <---------ZAT2 ----->At4g35610                  <---------ZAT14      <---------At4g35610  --------->At4g35610 ------At4g35610                  --------->ZAT14    <---------ZAT18------->TEIL --------->ANAC58 ---------At4g35610       <---------ARR14(2)<---------ICU4  --------->ZAT6  <---------At4g35610<----- -------->At4g35610 <-----------RAV1(2)    --------->MYB46(3)     <---------ZAT18--------->ANAC58   gcagatgctgactttagctgagccagaggttctcgctgcaatgcaaccattacagcgagctaagactatgcacttgctagctgaagccaccactactctt  8644000  Previous    Next  AGI:  At5g25070.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO66326.1) Range:  from: 8641001    to: 8643494    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g25080.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO44352.1); contains InterPro domain Exosome-associated factor Rrp47/DNA strand repair C1D (InterPro:IPR011082) Range:  from: 8643675    to: 8647061    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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