Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100              <----------DOF2      <-------TEIL     --------->CCA1(2)    <---------ARR14(2)                                                  <---------TOE1(3)    --------->ARR14(2)                                             --------->ARR11(3)   <------ZmHOX2a(1)                                               <---------ARR11(3) <---------TOE2(3)               --------->ZAT14               <---------MYB52(1) <---------TOE1(3)          ---------->DOF2           --------->ATHB12  <---------TOE2(3)   gtgaaggatacagactttagatttatagtcaaaagtaaactctaattttaggggagttattggacgttagattttaggtttaaaattcaagagagtttta  8610100                      <---------YAB1                    --------------->AGL15                                                        <---                    <---------------AGL15                                                      ------                   <-----------------AGL2   --------->DAG2                                    <------                   <-----------------AGL3  ---------->DOF2                                --------->AHL20(2)                 <---------------AGL15   <------ZmHOX2a(1)                          --------->ANAC58                 --------------->AGL15 --------->LBD16                              --------->ANAC46             <---------MYB52(1)       <---------LBD16                               --------->ANAC58           ----------->GT1            <-----------RAV1(2)     <---------YAB1 --------->ANAC58<-------           <---------ICU4            ------>ZmHOX2a(2)       <---------AHL20(2)   --------->MYB52(1)           --------->YAB1    <---------ARR14(2)             --------->YAB1   --------->ANAC58--------          <---------ATHB12 <---------MYB46(3)    <---------YAB1       <---------MYB52(1)  --------->YAB1   gtgtgttattcaatcgttactactataagtggttcttgatccaggaaaagtttgattaccgattataattcagtttgttaagccaaacgaaataatatca  8610200  <------MYB83  <------MYB46(1)                                        <---------YAB1  ----------->GT1                                     <---------AHL20(2) ------YAB1                                           <---------YAB1                          ------- --->YAB1 <-----------GT1     --------->MYB59       <---------ICU4                         --------->TOE1(3) ---YAB1<---------YAB1     <---------ARR14(2)      --------->ICU4           ----------->GT1--------->TOE2(3) --ARR11(3)    --------->GLK1(2)              ----------->GT1      ---------->DOF2 <---------AHL20(2) ->ARR11(3)   <---------GLK1(2) <-------GAMYB----------->GT1     <---------YAB1    --------->AHL20(2)   tatttggtttattatcgattctgaaatagaattcggttgaaaatagactgataaatattattatttcatgaaagcgtattgaaaattaaaaaaccataaa  8610300                                                                            ------->GAMYB                                                                          ------>MYB83                                                              ---------->DOF2    >>>>>>>>>ARR2                                      <---------DAG2     ------>MYB46(1)    >>>>>>>>>ARR1                                      --------->TOE2(3)--------->AtMYB61           -  <---------TOE1(3)         <-------TEIL            <---------ALFIN1   --------->MYB46(3)           -  <---------YAB1           --------->CCA1(2)   ----------->HVH21       <---------MYB52(2)           -  <---------TOE2(3)     --------->MYB59   --------->YAB1     <---------AHL20(2)                  ---- -->AHL20(2)    <-----------GT1          ----------->HVH21 <---------YAB1 -------->P      ---------->DOF2   ttttaagattgttgttatttacaaattagatacaactcattcaatgacactgacacaccttattaaaagagaaaccaaccctctcaaaaactaaaagaat  8610400                                                                                  <---------ARR11(3)                                                                          <-------PIF5              --------->TOE1(3)                                           ------->PIF5              --------->TOE2(3)                                           ------->MYC2             --------->ANAC46                                             <-------MYC3 -------->MYB46(2)                     <-------TEIL        ----------->HVH21      --------->ARR11(3) -------->MYB111(1)           --------->GLK1(2)        --------->ZAT14    ------->MYC3 -------->MYB52(2)        --------->YAB1--------->YAB1 <---------ZAT14    <-------MYC2         <----- -------->MYB.PH3(2)      --------->AHL20(2)     --------->MYB52(1)   <---------ZAT2         <-------   gttagttagatttatacgttaatagaaataatattctgacattcataaacaaaacggtccagtgacagtgagagctcgtgctaaaatctcatttttagga  8610500                                   <---------ALFIN1                                   --------->AtMYB61                                  --------->MYB46(3)                                --------->ANAC46                              ------>ZmHOX2a(2)                            --------->ARR14(2)                                                    ---                            <---------ARR14(2)                                                    ---                           --------->At4g35610                      --------->ARR11(3)          -----                           <---------At4g35610                      <---------ARR11(3)          <----                         --------->YAB1                  ------->GAMYB                --------->bZIP60(2)                     <---------AHL20(2)                  ----------->RAV1(1)          --------->ANAC58                    <---------AHL20(2)                   --------->AtMYB61            --------->ANAC55(1)   <---------ZAT18  --------->AHL20(2)                  --------->MYB46(3)            --------->ANAC46   --------->ZAT18  <---------AHL20(1)                --------->WOX13(1)            <---------ALFIN1 -ZmHOX2a(1)        --------->AHL20(1)  *TSS         <---------WRKY38(1)   --------->MYB46(3) ------- --TOE2(3)    ----------->GT1<------ZmHOX2a(2)       <---------WRKY12--------->GLK1(1)--------->ANAC58   agaagtgcccaaggagtagtaatataatcagatcccaccactcgaaaatagagagtcaaccacagagagagatatcaacaaatcacacacgccatgaacc  8610600                                                                                                <----                                                                   --------->LBD16              -----                                                                 ----------------->AGL1        ------             --------->DREB2C(2)                                 <---------LBD16               ------             ------->GAMYB                                      --------->MYB52(1)             <-----            --------->DEAR3(2)                            <---------ALFIN1               --------->MYB52(1)          <---------ALFIN1                             --------->YAB1                   <---------WRKY38(1)         <---------MYB55(2)                            --------->AtMYB61               <---------ATHB12         --------->MYB46(3)                            ------->GAMYB                  --------->ANAC58 --------->AtMYB61                                  --------->WOX13(1)                --------->ANAC58 --->MYB46(1)--------->DEAR3(1)            <---------ARR14(2) <---------SPL7--------->MYB52(1)<------ --->MYB83--------->AtMYB61                --------->ARR14(2) <---------ZAT14        --------->WOX13(1) ---->AtMYB61--------->At1g77200         <------NtERF2--------->MYB46(3)   <---------GLK1(1)  ------- -----MYB59 --------->MYB46(3)          --------->RAP2.6(2)   --------->ZAT14  ------->GAMYB------->GAMYB >TEIL  -------->P                 --------->DEAR3(2)-------->P --------->SPL7 --------->ANAC46<-----   aaaccaaaactaccaccgacgataacaaaaactccaaaccggccgaaaccgaatcaaccatcaccgtaccggaatggataaccgaaacaatcaacggtgg  8610700                               --------->MYB52(1)                             --------->DEAR3(2)                             <---------MYB55(2)                             --------->MYB46(3)                ------>ZmHOX2a(2)              <---------AGP1 <---------MYB52(2)         --------->O2      --------->ARR14(2)             ------->MYC3 ======================HOX2a_HOX2a                        <-------MYC3                     --------->ABI4(1) ------>ZmHOX2a(1)         <---------ARR14(2)            <---------ANAC46                  ------>NtERF2 =====================HOX2a_HOX2a                   --------->ANAC58                      --------->DEAR3(1) --NtERF2<---------O2  <---------LBD16              --------->ANAC58                     --------->MYB46(3) ---->ATERF1(1)<------ZmHOX2a(2)   --------->ZAT2   --------->ANAC46                    <---------At5g28300 >NtERF2 <---------ANAC46--------->LBD16      --------->MYB46(3)                      <---------ZAT14 --->ABI4(2)  <---------ARR14(2)   ----------->RAV1(2)   --------->O2       <---------ANAC55(2) ----ATERF1(1)--------->ARR11(3) --------->MYB46(3) --------->AtLEC2        --------->ANAC46 -------- ---DEAR3(1)  --------->ARR14(2)------>MYB83--------->REM1(1)               --------->ANAC55(2) -->ALFIN1    <---------ARR11(3)------>MYB46(1)--------->AtMYB61       --------->At4g35610--------->ANAC46 ----MYB46(3)<---------CCA1(2)--------->AtMYB61<---------ALFIN1        <---------At4g35610--------->DREB2C(2)   ctccttctgccacgtagatctcgagaccggaaccaacggctgggcttcaccaccaggcaacgtgttctctctccgctcacataactacttcaccgccaca  8610800                --------->ATERF1(1)         <---------ZAT14                <------NtERF2               --------->ZAT14               ------>NtERF2              --------->LBD16               <---------ATERF1(1)       --------->DEAR3(1)               <---------ORA47(2)        <---------ANAC46               <---------RAP2.3(1)      --------->RAP2.3(1)               <---------ERF1           <------NtERF2               <---------DEAR4(2)      <---------ATERF1(1)              --------->DEAR3(1)       ------>NtERF2              <---------RAP2.3(3)      --------->ABI4(1)              <---------RAP2.3(2)     <---------DEAR3(1)              <---------DEAR3(1)      --------->ANAC46              <---------ATERF1(2)     --------->DEAR3(1)              --------->ATERF1(2)     --------->RAP2.3(2)             <---------ABI4(1)        --------->RAP2.3(3)             <------NtERF2            --------->RRTF1(3)             <---------GLK1(2)             --------->ATERF1(1)     --------->RAP2.3(1)         ---------->DOF2            --------->LBD16          --------->ERF1           --------->AtMYB61            ------>NtERF2            --------->ATERF1(1)      ----------->RAV1(1)          <---------LBD16            --------->DEAR4(2)      --------->ANAC46        ------>ZmHOX2a(1)     <---------ARR11(3)             <---------ATERF1(1)    --------->ANAC46  ===============HOX2a_HOX2a     --------->ARR11(3)     ------>ZmHOX2a(1)           --------->ARR14(2)   <------ZmHOX2a(2)      < --->RAV1(1)<---------ATERF1(1)    --------->ANAC46     <---------ARR14(2)  <-----------HVH21  ------   aaacaaaaatctcccggcggcgattacctcctctctctcgccgccgtagactggctcaaatccaccacaaagaaactcgatcacatcctctctcgtcccg  8610900                                                                       --------->LBD16                                                                      --------->LBD16                                                                     <-----------RAV1(2)             --------->ANAC58                        <-------GAMYB   <---------LBD16             --------->ANAC46                        --------->At5g28300     --------->REM1(2)                     --------->REM1(1)      --------->PCF2--------->ZAT6  ------->GAMYB <----------DOF2           <-------TEIL--------->DOF5.7(2)      --------->ZAT18 ---------At5g28300                   <---------TOE1(2)          <-----------HVH21   --------->REM1(1) --->LBD16   --------->ANAC58        <---------CCA1(2)<---------MYB52(1)  ---------->DOF2   ataaccgtgtaatccacgctttcaaaacatcccaatctcgtagcttcatcttcgccgttaatttccaggtcccagggaaagaacactacaacttggtctt  8611000  Previous    Next  AGI:  At5g24990.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G25010.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN83078.1); contains InterPro domain Protein of unknown function DUF1336 (InterPro:IPR009769) Range:  from: 8610540    to: 8611697    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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