Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                        --------->ANAC46                                      --------->ANAC58                                  --------->AtMYB61                                  <---------ALFIN1                     --------->YAB1   --------->ANAC58        --------->YAB1            ------->GAMYB        --------->AHL20(2)       --------->MYB46(3)       <---------ATHB12       --------->MYB46(3)     --------->ANAC46     --------->WOX13(1)--------->At4g35610           --------->ANAC58                       <-------- -------GT1        --------->GLK1(2)  --------->ANAC55(1)        ----------->GT1---------->DOF2 >CCA1(2)         --------->YAB1-------->P           --------->ANAC58         >>>>>>>>>RAP2.2   actttctcaatcaaattcaagaatcagaagaaacaaccacacgaaactagttctcaagccatagaaacagaaaaattcaatctaaaggaagaaactttta  8547400                    ----------->GT1                 --------->MYB52(1)            <---------AHL20(2)      --------->ANAC58      --------->ANAC55(2)      --------->ANAC46      --------->ANAC55(1)      <---------ANAC55(2)      --------->ANAC58     <---------TOE2(3)                                                ----------->GT1    <-----------GT1 ------->GAMYB   <-----------GT1           --------->YAB1 --------->MYB52(1) --DOF2     --------->AHL20(2)    <----------DOF2           <---------ARR11(3)   tcgaatttacgtaattaaacaacggaaaaaacaaaactttacaatattgaatacgaaggcaaaatcatcaaatagaaaaaaacgatttttggattttgtt  8547500                                                           --------->GLK1(1)                                                         <------NtERF2                                                        ------>NtERF2                                                        <---------MYB46(3)                                                        <---------RAP2.3(1)                                                       <---------ATERF1(2)                                                       --------->ATERF1(2)                                                       <---------DEAR3(1)                                                       <---------ANAC46                                              <---------DAG2                                        --------->YAB1--------->ATERF1(1)                                       <---------YAB1<---------ATERF1(1)                                     <---------At4g35610<---------ERF1                                  --------->LBD16    <---------RAP2.3(1)                  ---------->DOF2<---------HSFB2a(2) ------>NtERF2              ---------->DOF2    --------->HSFB2a(2) --------->LBD16           --------->TOE2(3)     <---------ANAC46   <---------RAP2.3(2)         <---------At5g28300    <---------LBD16     <---------LBD16                 <---------ANAC46        <-----------GT1     <---------HSFC1(2)================================================bZIP_DOF        <<<<<<<<<GT-2       --------->HSFB2a(1)     <---------RAP2.6(2)             <---------TGA1a     <---------ICU4         <---------HSFB2a(1)    <---------LBD16             <---------ANAC55(2)  -  --------->ANAC55(2)       --------->HSFC1(2)<----------DOF2         --------->DEAR3(1)     --------   tttctcgtaattaccgtaaagaaagagcgaaatttccggagatgataactttttccggcggctatctcttcaccgaagaaaacgtgaagtgagagagatg  8547600                                                                                                <----                    >>>>>>>>>TBF1                                                               <----            ------------------------>ANAC81                                                     <----           >>>>>>>>>TBF1  >>>>>>>>>TBF1                                   --------->LBD16       <----        >>>>>>>>>TBF1  >>>>>>>>>TBF1     --------->LBD16          <---------AHL20(2)         -------- --------->YAB1  >>>>>>>>>TBF1   --------->YAB1                   --------->AHL20(2)>>>>>>>>>TBF1 <-- -------->ICU4>>>>>>>>>TBF1      --------->AHL20(2)           <---------AHL20(2) >>>>>>>>>TBF1  <---- ->CCA1(2)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)          ----------->GT1<---------LBD16>>>>>>>>>TBF1   cgatgatgaagaagaagaagaagaagaagaagaaataatattccgaataattttgtgagaggttttaatttaaaaccggagaagaagaagaagaagtggc  8547700                                                              ---------->DOF2                                    <---------MYB52(1)      --------->ANAC58                       <-    --------->DAG2                <---------MYB46(3)        <---------YAB1                         <-  ---------->DOF2           ------>ZmHOX2a(2)               --------->ANAC58                   <----- -----ANAC58               --------->At4g35610              --------->ANAC55(2)              <------NtERF2 -----ANAC58              --------->ARR11(3)                <---------ANAC55(2)             ------>NtERF2 -----bZIP60(2)           <---------ARR11(3)        <---------MYB52(1)                      *TSS<---- -----ANAC46            <---------KAN4(1)          <-------GAMYB                          <---------ABI4(2) ->ALFIN1               --------->KAN4(1)         <---------ANAC46                      --------->ANAC46 ----NtERF2            <---------KAN4(2)          <---------ANAC58                      --------->ANAC58 -----REM1(1)     <---------------------WRI1      <---------ANAC58<------ZmHOX2a(1)     --------->ANAC58   gtagcaaaggcgaaacagaagtcggaatgatctgagccgttgattttgggtttcgttgagttacgaaaggacatgagagaggttattgaaacggcaccgt  8547800                                                   <----------DOF2                                             <---------AHL20(2)               ---------->DOF2          --------->LBD16                <---------AHL20(2)             ----------->GT1         <---------ANAC55(2)            <---------AHL20(1)             --------->DAG2            ----         --------->ANAC55(2)            --------->AHL20(1)            ---------->DOF2            ---- --------ANAC58                       <---------AHL20(1)       <---------ANAC46--------->DAG2   ----- --------ANAC58             <---------AHL20(2)  <-----------GT1<---------ANAC55(2)          <------ZmHOX2a(1) --GAMYB<---------LBD16 <---------AHL20(2)   --------->AHL20(2)--------->ANAC55(2)        <---------TOE2(3) -----MYB52(1) --------->YAB1         --------->AHL20(1)  <-----------GT1----------->GT1  <---------TOE1(3)   tgctagttatcgcggaatgatatgttttaatttatactaatatatatttatttctttttgtaactacgtgaaaaaagttaaaaagggagtttaaggaaac  8547900       <---------WOX13(1)     --------->ATHB12                                                             --------->GLK1(2)    <---------AHL20(2)        <---------------AGL15                --------->TOE2(3)    --------->AHL20(2)        --------------->AGL15    <---------ARR11(3)    --------->YAB1 ----->TOE1(2)                --------->YAB1           --------->ARR11(3)   <------ZmHOX2a(2) <------ ----->TOE2(2)               <---------YAB1----------->GT1        ----------->GT1<---------GLK1(2) ---->YAB1            --------->YAB1       --------->YAB1    <---------MYB52(1)<---------YAB1 -------   ataagattaattgataaatagcactcatattatcaaaattagtaatagtaatttcaagaactcgttaagcgttaaacgatcacgattcttgtaagaaaat  8548000                                                         --------->YAB1                             --------->ARR11(3)          --------->ANAC55(2)                  --------->ANAC58                <-----------GT1      --------->ZAT6     --------->YAB1  ------->TEIL   <-------TEIL                         <------- ---HSFB2a(1)     --------->ANAC46   --------------->AtSPL8                     <---------AHL20(2) -->HSFB2a(1)     --------->ANAC58   --------------->AtSPL3                     --------->AHL20(2)  -   tcttctaaacactaactaatacgcctaagatgatatagaaacgtaccattttttagcatacataatcaaacaatacacatattaaaacaatttttaagaa  8548100                    --------->AHL20(2)      --------->AHL20(2)         <---------AHL20(2)                 <---------AHL20(2)         --------->AHL20(2)            --------->AHL20(2)        <---------AHL20(2)             <---------AHL20(1)        <---------AHL20(1)             <---------AHL20(2)                       <---------YAB1        --------->AHL20(2)             --------->AHL20(1)                     --------->YAB1     --------->AHL20(2)     --------->AHL20(1)                               --------->ICU4    <---------AHL20(2)      <---------AHL20(1)                  --------->TOE1(2)    --------->AHL20(2)     --------->AHL20(2)                   --------->ARR14(2) --TOE2(3) <---------YAB1--------->AHL20(2) --------->AHL20(1)  <---------ARR14(2)          --------- -------->YAB1<-----------GT1    --------->ANAC55(2)       ----------->GT1 ---------->DOF2-----------   aatcatataaattatttttcattttaaaaatatatatgtaataaaataaaataaaactgtatggaaaatacgaagaataaagatgataagaagagtgtaa  8548200                                                                                              -------                                                                                              <------                                                                                             --------                                                                                  --------->ICU4                                                                                  <---------YAB1                                                                   --------->ATHB12<---------ICU4                                                                   <---------AHL20(2) <---------ICU4                                                                   --------->AHL20(2) --------->YAB1                     <----------DOF2                  <---------AHL20(2)     ----------->GT1 <-------                   ---------->ID1                     --------->AHL20(1)    <---------TOE2(3)<-------        <---------AHL20(2)                            --------->AHL20(2)    <---------TOE1(3)<-------       --------->AHL20(2)                            --------->AHL20(2)<---------MYB46(3)--------->AHL20(2) -->GT1<---------AHL20(1)      --------->YAB1    ------->GAMYB     --------->ATHB51--------->YAB1<--- >GT1  <---------AHL20(2)     <---------YAB1    --------->MYB46(3)<---------AHL20(2) --------->ICU4   tatgaacaattttttttttttgtctttttgttataaaaacgtcgttctcaaccaaaaaaattgacaaaattatttgttgaggtaataataatcaaataat  8548300  Previous    Next  AGI:  At5g24870.1    Description:  zinc finger (C3HC4-type RING finger) family protein. similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT5G10650.2); similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT5G10650.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43928.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 8544788    to: 8547792    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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