Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                         <---------AHL20(2)                                                                       --------->AHL20(2)               <---------YAB1                                         --------->AHL20(2)        <---------ARR11(3)                                         --------->ATHB51        --------->AHL20(1)                                         <---------ICU4        <---------ICU4                                             --------->AHL20(2)        <---------AHL20(1)                                         <--------ATHB1        --------->ARR11(3)                                         <---------AHL20(2) --------->YAB1     --------->AHL20(2)                                           <---------YAB1     <---------YAB1     --------->YAB1                                               --------->ICU4--------->YAB1  --------->YAB1 <---------ARR11(3) ----------->GT1             --------->YAB1 --------->AHL20(2) <---------YAB1--------->ICU4     ---------->DOF2     <---------ATHB12<---------AHL20(2)    --------- ---------AHL20(2)  --------->AHL20(2)              --------->WOX13(1)<---------AHL20(1)   <---------GLK1(2) -------->AHL20(2)  <---------AHL20(2)     ---------->DOF2   --------->YAB1<---------AHL20(2) ------->YAB1--------->YAB1  ---------->DOF2--------->DAG2 --------->AHL20(2)--------->TOE2(3) <-----   attttaataatattttcatgattttattttgtaaagaaaagtataaaaagtcataaatcaataacataataatttaattcattaaaaatcatagattctt  8530600                         --------->AHL20(2)                     <---------AHL20(2)       --------->AHL20(2)<---------AHL20(2)     ------->TEIL                           --------->YAB1      <---------WOX13(1)--------->AHL20(2)   <---------YAB1                           <---------YAB1   <---------YAB1    --------->AHL20(1)--------->AHL20(2)                           <----------DOF2 -   <---------AHL20(2)--------->AHL20(2)<---------AHL20(2)                        <-----------GT1   -- >GLK1(2)           --------->AHL20(2)--------->YAB1                     --------->GLK1(2)  <-------- -----DOF2    --------->ZAT6       --------->YAB1                       <---------GLK1(2)   ---------   ttgttttaattgaataacacaaaaaaattaatgacatttataaaaatatgaatccaaaacttcagatttataaagattctatattacttttatagtgttt  8530700                                                              --------->AHL20(2)                                                              --------->AHL20(1)                                           --------->GLK1(2)  <---------AHL20(1)                                          <---------ARR14(2)  <---------AHL20(2)                                          --------->ARR14(2)<---------TOE2(3)                                          <---------GLK1(2)--------->AHL20(2)                                     --------->MYB52(1)    --------->YAB1            ------>MYB46(1)          <-----------GT1       <---------AHL20(2)  <---------ICU4                  --------->YAB1<---------ANAC55(2)  --------->YAB1              <---------AHL20(2)--------->ANAC58 -------->AHL20(2)<-----------GT1<---------AHL20(2)  ----------->GT1                  --------->AHL20(2) ------->YAB1   <---------AHL20(2)<---------ICU4--------->ANAC55(2)      <---------YAB1    --------->YAB1 -ZAT6      ------>MYB83     --------->AHL20(2) --------->ANAC46    --------->ANAC55(2)   <---------ATHB12 -->GT1--------->ZAT6        <---------AHL20(2) --------->ANAC58 <---------AHL20(2)   <---------AHL20(2)   aaaataataacaccaaattttaacaaacttattaaataataacagattctacgtaatgtattaatattttaagtgatgaaaactctatttaaatcataaa  8530800                                                                                        ----------->GT1                                                                                     --------->YAB1                                                                                     <------ZmHOX2a(1)                                                                                   <---------TOE2(3)                                                    <---------ICU4           --------------->AGL15                           ------->TEIL             --------->YAB1           <---------------AGL15              ---------->DOF2                     --------->ARR11(3)        <-----------------AG    --------->ZAT6      <---------YAB1      ----------->GT1                 ----------------->AG  --------->YAB1     --------->ICU4       ---------->DOF2------->TEIL     <-----------GT1  <---------AHL20(2) <---------ATHB12    <---------YAB1    --------->YAB1 <---------YAB1--------->LBD16<---------TOE1(3)   ccaataacactgtttttaaagtgattatgaaactagtccaaaaataaagaaaaatcatgaaactaagccccgtattaaacctattaaggatagttaatgg  8530900                                                      --------->HSFB2a(2)                                                   --------->ZAT18                                                 ------->MYC3                                                 <-------MYC3                                                 <-------PIF5                                                 ------->MYC2                                                 <-------MYC2                                                 ------->PIF5                                                 <-------MYC4                                                 <-------PIF4                                                 ------->PIF4                                                <---------TGA1a                                                --------->O2                                                --------->TGA1a                                                <---------O2                      --------->TOE1(3)         --------->ANAC55(2)           <---------At4g35610                      --------->TOE2(3)         ==============================MYC_MYB                 --------->ANAC58               --------->ANAC46 --------->At4g35610                 --------->ANAC58               <---------ANAC55(2)           --------->At4g35610             --------->ANAC58                  ------------>OsbHLH66       <------NtERF2          <--             --------->ANAC46        --------->At4g35610        --------->ARR11(3)               <---             --------->ANAC58    <-----------TGA1------->MYC4   <---------ARR11(3)              <----     ----------------->AGL2   <-----------GT1 <------------OsbHLH66  -------->P  *TSS    --------->WOX13(1)   gccatagcccaaaacaagcaagaaccctaaattttcgtcatcttcatcacacgtgcccagaaccaagagcttacctcggcatctgatttagcaatctgga  8531000 --------->ARR14(2)                                                            ------->TEIL <---------ARR14(2)       >>>>>>>>>>>>>>>>>LFY           --------->YAB1 <---------ANAC55(2)        <- ---------RAV1(2)    <-----------GT1                    <---------YAB1  <---------ANAC58          <-- ---ZmHOX2a(2)  <---------YAB1                     --------->At4g35610  <---------ANAC46        ----- -------HVH21 <---------At4g35610 ----------->GT1  <---------At4g35610  <---------ANAC58        -----   tcaggtctgcaatttctgatgattcactctccattgttgtaaatctatgtttcagcttatgatcaaaaaccaatgcgtatgaatcgtctatgttcaccaa  8531100      --------->ANAC55(1)      <---------ANAC55(2)      --------->ANAC58      --------->ANAC58      --------->ANAC46                                                              --------->ANAC46      --------->ANAC55(2)                                                        --------->ARR14(2)   <---------ZAT18                                                               <---------ARR14(2)   <---------ZAT14                                                            <---------ANAC58   --------->ZAT14                                                            <---------ANAC46 --------ICU4                               <---------At4g35610      <---------ANAC58 -------ATHB12                         --------->LBD16               <---------ANAC58    <---------At4g35610 ->MYB46(1)--------->DAG2            <---------LBD16                 <---------ANAC46    --------->At4g35610 ->MYB83  ---------->DOF2           --------->MYB52(1)   ----------->GT1      <---------ANAC58  -----   atcagtacacgtaaaagcgaatgtgatttctctaattctaccggagagcttattcaaacctgtaattcgcttcgtgttttgcgtatacgtctgctcaatc  8531200                  <---------WOX13(1)               <---------YAB1           <----------DOF2     --------->YAB1 <-----------GT1                                                         ---------    <------ZmHOX2a(2)                       <---------DAG2                                --------->ANAC46   --------->ARR11(3)                       <----------DOF2 ---------->DOF2               --------->ANAC58   <---------ARR11(3)  --------->TOE2(2)  <---------At4g35610                        <---------YAB1 ---->YAB1 <---------DAG2     <----------DOF2     <-----------GT1    <---------MYB52(1)   --------->ANAC58   ttcaagatcataactttttgattaacctatggctgtaagtttgcagcttttttttcttcttacaaagctctgttttttgctaacttgattatacgaaaga  8531300                                         <---------ANAC46                                     <---------ANAC58                                   <---------ARR11(3)                                   --------->ARR11(3)                                   --------->AHL20(1)                                   <---------AHL20(1)                 <---------LBD16  --------->RVE1(1)          <---------ANAC58        --------->CCA1(1)          <---------ANAC46    --------->AHL20(2)  <-----------GT1                       ---------->DOF2    <---------AHL20(2)      <----------DOF2     <---------HSFC1(2)                     ------->GAMYB    --------->AHL20(2)   ------->TEIL<---------ANAC58            <-----------GT1       --------->AtMYB61 ->DOF2   <---------ANAC58<---------At4g35610   --------->HSFC1(2)<---------At5g28300 --------->MYB46(3)   gttgattttattgcttatattcggatgcagcttttaatatcttgtggggaagttacctcttctcaattcactgtatttcgcttactcaaccaaagccttg  8531400                                               --------->TOE2(3)                                             -------->P                                             ------>MYB46(1)                                             ------>MYB83                                            --------->MYB55(1)                                           --------->AtMYB61                                           --------->DEAR3(1)                                           <---------MYB111(1)                                           --------->MYB46(3)                                           <---------MYB55(2)                                           <---------MYB111(2)         --------->ATHB12                                           <---------MYB46(2)          <---------AHL20(2)                                          --------->MYB46(3)          <---------AHL20(2)                                        <-----------GT1       <---------YAB1        <---------WRKY18(1)       <---------ZAT6             ------>ZmHOX2a(1)   <-------TEIL<-------TEIL   <---------AtLEC2     --------->MYB52(2)      <---------At4g35610 <-----------RAV1(2)  --------->AHL20(2)          <--   attttgttagtgacaatgtctctaggctcttagctcctattttcaccaacctcaggtacatgttttgattcatttattggtttccatgaccatctaatct  8531500  Previous    Next  AGI:  At5g24830.1    Description:  pentatricopeptide (PPR) repeat-containing protein. similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT1G12300.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44691.1); contains InterPro domain Pentatricopeptide repeat (InterPro:IPR002885) Range:  from: 8530981    to: 8533870    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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