Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                           --------->CCA1(2)                         <------ZmHOX2a(2)                        <---------ARR14(2)                        --------->AGP1                        --------->ARR14(2)                        <---------ARR11(3)                    ---------->DOF2                   <---------WRKY38(1)                  --------->WRKY18(1)                              <---------ANAC58                 <--------ZAP1                                     <---------ANAC58                 <-----------HVH21                                 <---------ANAC46          <---------ANAC58                                         ----------->GT1          <---------ANAC58        --------->WRKY12            ------>ZmHOX2a(1)          <---------ANAC46    <---------ATHB12                <----------DOF2       --------->ALFIN1 --------->ARR11(3)               --------->ANAC58  <------ZmHOX2a(1)<---------WRKY12                      --------->ANAC58                <-----------GT1  ==============================HOX2a_HOX2a     <----------DOF2   ---------->ID1   <----------DOF2   gagaggagagtgtcgtctaggtcaaagatccaaacattgacggtatcgttctttagggcaagtcctttggcgtaaaaatatgcctctttgtttacagttt  8508600                                                                      --------->REM1(2)                                                                     --------->ALFIN1                                                                     <xxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                               --------->ATERF1(1)                                                               --------->ZAT18                                                               <---------ABI4(2)                                                               <---------PCF2                                                              <---------ATERF1(1)                                                              ------>NtERF2                                                             --------->LBD16                                                             <---------ATERF1(2)                                                            <---------ANAC58                                                            <---------ANAC46                                                            <---------ANAC58        <---------YAB1              <---------ZAT6                               <xxxxxxxxxxxxxxxxxxxsmallRNA(fl3)        <---------------AtSPL3                             <---------LBD16        --------->YAB1   <---------ANAC46                <---------ZAT6<----------DOF2  <------NtERF2  <---------YAB1   tggagtcgtattggtactgtttggaagtgatcaagtagtcttcaacataggctttgcaatttgcgggcaccgtgtcgaagtttatgatgttagaggtctc  8508700                             <---------MYB46(3)                             --------->MYB111(2)                             --------->MYB55(2)                      --------->ALFIN1                     --------->ZAT2                     <-------GAMYB                  --------->ZAT14                  <---------ZAT14                  <---------At4g35610               --------->At4g35610             <---------GLK1(2)<-------GAMYB            <---------ZAT2   --------->MYB46(2)            --------->ZAT2   --------->MYB111(1)            <---------At4g35610            --------->At4g35610           ------>NtERF2     --------->MYB52(2)         --------->ATERF1(1)<--------P                                     ---------->DOF2      <----         <------NtERF2<---------MYB52(1)        <----------DOF2          <---------HSFB2a(2) --------     --------->ZAT2  <---------ZAT2<---------WOX13(1)         <---------RAP2.6(2)            <-------   aacaccaaggtgccagcttctgcagttggggtagttgatggacagtccctctttctctaagagttcggcttcgttcccaaagatggtgttcgattcgagg  8508800                                    --------->ALFIN1                                   ------->PIF5                                   <-------PIF5                                   --------->TOE1(2)                                  <---------O2  --------->At4g35610              <---------ARR14(2)                                  <---------ANAC58                               --------->ARR14(2)           --------->HSFB2a(2)    ===============================================bZIP_DOF           <---------HSFB2a(2)    <---------ANAC58                               <---------ARR11(3)          <---------LBD16         <---------TGA1a  ------>NtERF2                 --------->ARR11(3) --ZmHOX2a(1)                     --------->TGA1a<---------RAP2.6(2)            <------ZmHOX2a(1) <-- ->HSFB2a(2)                      <---------ANAC46--------->RAP2.6(2) ---------->DOF2       <-------- --HSFB2a(2)                   ----------->HVH21<---------At4g35610 <---------ZAT6    --------->YAB1   agttcgatgagccctggaacggatgccgaagactggacgtgggagaccgtagcggccaagagcaagagtagtgaaagtgagaggattttcatattttttt  8508900                                                                            --------->YAB1                                                                            --------->ATHB12                                                                           --------->ICU4                                                                       <------MYB83                                                                       <------MYB46(1)                                                                       <---------ANAC55(2)                                                                      --------->MYB111(1)                                                                      --------->MYB59                                                                      --------->MYB46(2)                                                                     <---------MYB55(1)                                                                    <<<<<<<<<MYB98                                                                    <---------MYB52(1)                                               <------MYB83        <-------GAMYB                                               <------MYB46(1)    <------MYB83                                               ----------->GT1    <------MYB46(1)                                              <---------AtMYB61  <---------MYB46(3)                                           --------->DAG2     <---------ANAC46   <---------ANAC58                                  ----------->HVH21         *TSS--------->ALFIN1 <---------ANAC55(2)                                <---------ANAC58     <---------AHL20(2)<---------ANAC46 ----------->GT1                <---------ANAC58    --------->AHL20(2)--------->MYB52(2) -------AtLEC2            <---------AHL20(2)  --------->ALFIN1<---------bZIP60(2)<---------ANAC58   - -AHL20(2)            <---------ANAC46  ---------->DOF2 <---------AHL20(2) <---------YAB1       -----   gtatggtttattgtttagtttatggtgtttatttgtgtgacacaaagggtggtattatataatgaggtgggttaggtatgattacttatgaagaccgatg  8509000                                                                             <---------ARR11(3)                                                                        ------>MYB83                                                                        ------>MYB46(1)                                                                       --------->MYB52(1)                                                                      ------->GAMYB                                                                      --------->TOE1(2)                                                    ---------->ID1    --------->TOE2(2)      <-------                                                  <------MYB46(1)    --------->MYB46(3)      --------                          <---------ANAC58        <------MYB83       <---------MYB55(2)   --------->ZAT6      --------->LBD16     <---------ANAC58      <--------P    <---------ANAC58<---------RVE1(1)     <---------ANAC46     <---------ANAC46    <---------MYB46(3)     <---------MYB52(2)   --------->REM1(1)    <---------LBD16--------->ANAC55(2)      <---------ANAC58  <---------ANAC58<---------CCA1(1) --------->TaMYB80------->TEIL              <---------ANAC58<---------YAB1   --------->ARR11(3) ------>GT1   <---------------AtSPL3--------->AtLEC2--------->PCF2 <-----------GT1        --------->ANAC46   ggaaaatgcggagataagtgtacgtatggcttcgagtgatgcaaatgcttgttggtcccattatgcttgtaaccaacgagatattttcacttacaccact  8509100                    --------->ZAT18           <---------MYB52(1)     <---------MYB52(1)                    <---------ZAT14          <-------GAMYB          <---------SPL7           <-------MYC2                  --------->ALFIN1         <---------YAB1           <-------MYC3                <---------ANAC58        <---------YAB1      <---------MYB46(3)       <---------ZAT18                 <---------ANAC58      --------->YAB1      <---------ANAC58 --ALFIN1  ------->MYC3                <---------ANAC46      <--------HAHB4      <---------ANAC58<--- ->AtMYB61 ------->MYC2      --------->YAB1 <---------ANAC46<---------YAB1<----------DOF2       <----   cgtttttagagcacgttgagactgtgctaaattagaatttggcgtgtcgttgtttaagttctattattatcgttcgcttttgtgcttgttgattttggat  8509200                                                                                                 <---                                                                                                <----                                                                                              -------                                                                                              <------                                                                    <---------AtLEC2          -------                         <-----------GT1                --------->ICU4 --------->REM1(2)     --------                       <---------ICU4           <---------ANAC46    <---------ANAC58         <-------                      --------->ICU4            <---------ANAC58    <---------ANAC55(1)      <-------            <---------ZAT6                      <---------ANAC58    <---------ANAC58         --------          <---------At5g28300                  <-------TEIL   <---------YAB1            --------->LBD16 --------RAV1(2)      <---------YAB1           ------->TEIL<---------YAB1              <---------ANAC46 --ZmHOX2a(2)    ----------->GT1           <---------------AtSPL8   <---------ANAC46  <---------LBD16   cagggtttcaattactgtgaagttattattccacattagtagaaaaatgtacgtggacatgatgatgtttgcgtgtataacttgagtttgcggaaataat  8509300      ---------->DOF2   ----------->GT1              <---------WOX13(1)   <---------ZAT6             <--------ATHB1 ------AHL20(2)               -------->HAHB4 -----------AGL15             --------->ATHB51                     --------->ANAC55(2) -->AHL20(1)                  <---------ICU4              <--------ATHB1                          <-- ---AHL20(2)                  --------->ATHB12            ---------->DOF2                         --- -->AHL20(2)                 --------->AHL20(2)           --------->YAB1<---------bZIP60(2)       --- ->ICU4                      <---------AHL20(2)          --------->ICU4 <---------ANAC46        ----- --AHL20(2)                  <---------ATHB51            <---------ATHB12 <---------ANAC46    ------- --ATHB51              --------->YAB1                    <---------ATHB51 ----------->GT1<---------WOX13(1) ->AHL20(2)         <----------DOF2       <---------MYB46(3)       <---------ANAC55(2) --------->ATHB12   ttatagagtaaagtttttatttctttgataaataattgatagagtagttgacaaaaacaataatgcaaaacgtgatgtgtataaacgagtaattggcaac  8509400                                                                                           <---------AHL20(2)                                             -------->HAHB4                              <---------YAB1                                             --------->YAB1                            <---------ICU4                                       --------->YAB1                                  --------->ATHB51    --------->LBD16                    --------->TOE2(3)                               --------->AHL20(2)   --------->ANAC55(2)          --------->ZAT14                   <---------TOE1(2)    <---------AHL20(2)   --------->ANAC58        <---------ZAT14  <---------YAB1        ------->TEIL     <---------AHL20(2)   --------->ANAC46        --------->ZAT18<---------ICU4      <---------------AtSPL3  --------->ICU4   --------->ANAC58        --------->ZAT14<--------HAHB4      --------------->AtSPL8  <---------YAB1  <---------LBD16        <---------------AtSPL3               <---------------AtSPL8--------->YAB1--- -------At4g35610        <---------------AtSPL8             <---------ICU4         --------->AHL20(2) ------>At4g35610       <---------ANAC58  --------->YAB1   <---------ATHB51        <---------YAB1 <-- ------>ZAT2            <---------ANAC46 --------->ICU4    <---------YAB1         <---------AHL20(1) ---->MYB46(3)          <---------ANAC58 <---------YAB1  --------->YAB1           --------->AHL20(1) ---->RAV1(1)    ---------->DOF2<---------ZAT14          --------->TOE2(3)        --------->AHL20(2)   agcttccgcaatgagcgagaaaagatgggtgtactgtacaacgataattatagtttcaacgataattgtacgttcttccaacaatataattattttttct  8509500  Previous    Next  AGI:  At5g24780.1    Description:  VSP1 (VEGETATIVE STORAGE PROTEIN 1); acid phosphatase. Identical to Vegetative storage protein 1 precursor (VSP1) [Arabidopsis Thaliana] (GB:O49195;GB:O23827;GB:O82121;GB:Q39259;GB:Q42000;GB:Q93VJ6); similar to VSP2 (VEGETATIVE STORAGE PROTEIN 2), acid phosphatase [Arabidopsis thaliana] (TAIR:AT5G24770.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23178.1); contains InterPro domain Vegetative storage protein/acid phosphatase (InterPro:IPR014403); contains InterPro domain Plant acid phosphatase; (InterPro:IPR010028); contains InterPro domain Acid phosphatase (Class B); (InterPro:IPR005519) Range:  from: 8507593    to: 8508960    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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