Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100   ----NtERF2 -----ANAC58                                                                                  ------>NtERF2 -----ANAC58                                 ---------->DOF2                     --------->HSFB2a(2) -----ANAC46                               <---------HSFB2a(2)                   <---------HSFB2a(2) -NtERF2          <----------DOF2 <---------------------WRI1 --------->DEAR3(2) <---------LBD16   gtagttgatggaaagtttctctttctctaagagttcggctacgttcccaaagatggttttcgaatcgacgagttcgatgagccctggaacggatgccgag  8501800                                                                                                    -                                    --------->ARR11(3)                                     ----------            ------------------------>ANAC81                                                ----------      ------>NtERF2                 <---------ARR14(2)                                    <----------     --------->RAP2.6(2)            --------->ARR14(2)                         ----------->GT1-------    <---------RAP2.6(2)             <---------ARR11(3)    ----------->GT1      <---------YAB1 <------   --------->At4g35610             <------ZmHOX2a(1)     <---------AtMYB61     <---------ANAC46  ----   <---------At4g35610   ---------->DOF2            <---------TOE2(3)          --------->ICU4 -------   accgtagcggccaagagcaagagaagtgaaagtgagaggattttcatgttttttatggtatggtttattgtttagtttgtgatgtttatatgtgtgacgc  8501900    <------MYB83    <------MYB46(1)    ----------->GT1                                              --------->ARR11(3)   <---------AtMYB61                                             <---------ARR14(2)   --------->ALFIN1                                              --------->ARR14(2) -------->DAG2                      --------->ATHB12             <---------ARR11(3)               --- ->TGA1               <------NtERF2<---------YAB1<---------At4g35610                              <-- ->HVH21            --------->ALFIN1-------->HAHB4        --------->ICU4   <----------DOF2      ----- -HVH21           <---------bZIP60(2)          <-----------RAV1(2)--------->CCA1(2)        <------MYB83 -->ANAC58        <---------ANAC46 --------->ICU4--------->At4g35610      <---------ANAC58 <------MYB46(1) ---ANAC46   --------->YAB1        <---------ATHB12     --------->CCA1(2) <---------ANAC58<---------MYB46(3) ------>DOF2<---------YAB1  <---------YAB1  --------->ANAC58   ----------->ARR10          <---------AtMYB61 -->ANAC58--------->YAB1<-------GAMYB       --------->ANAC58  <------ZmHOX2a(1)        --------->ATHB12   aaagggtggtatttataatgaggtggggttatgagaaatgattaagaagccagatgagaaatgaggagatatgtgtgcttgtctgttttcgattggtgca  8502000                                                                               <---------ANAC58                                                                               <---------ANAC58                                                                         <---------TOE2(3)                                                   --------->AtMYB61 <-------MYC2                                                   <---------ALFIN1  ------->MYC2                                                --------->ZAT6       <-------MYC3           <---------TCP20                      --------->REM1(1)    ------->MYC3           --------->PCF2          <---------RVE1(1)               ------->TEIL<---------ANAC46    <-           --------->PCF5<---------YAB1         --------->ANAC46 --------->ZAT14                   <- ------>MYB46(3)   <---------YAB1  <---------CCA1(1)             <---------ZAT18                   <- -------MYB52(2)   ----------->GT1--------->ARR11(3)             --------->ZAT18            <-------- ------>RAV1(1)    --------->ICU4 <---------ARR11(3)             <---------ZAT14<---------ZAT18   ---   acaaatgctactggtcccataatgtttataatcgacgatatttttcacttacaccactcgtttttagtgcacgttgagattgtgtgcttaactagaattt  8502100                                <---------ANAC46                           --------->ARR14(2)                           <---------ARR14(2)                         <----------DOF2                               <---------ZAT6      ---------->ID1    <---------ANAC58                               ----------->GT1    <-----------RAV1(1) <---------ANAC58                           <---------ARR14(2) --------ANAC58    <----------DOF2                                 --------->ARR14(2) --------ANAC46  <---------YAB1 <---------ANAC58                   <---------ZAT14 --------ANAC58 --------->ARR11(3)                      <---------ANAC58                    --------- -GLK1(2)       <---------ARR11(3)----------->GT1       <---------ANAC58              --------->REM1(1) ------->ID1   --------->YAB1   <---------ANAC58        <---------ANAC46  ---------->DOF2   <--------   ggcgttttgttgttctattatctttggcttatctgcttgtaaattttgaattagagtttcgttttggagaatactgtaaagttgttctacattactagaa  8502200                                                                                         <---------WOX13(1)                                                                                        <------------CBF                                                                                       --------->ATHB51                                                <---------AHL20(1)                     <---------ICU4                                                --------->AHL20(1)                     --------->ATHB12                                                --------->ARR11(3)                     -------->HAHB4                                                <---------AHL20(2)                    <---------AHL20(2)                                               <---------------AGL15                  <---------ATHB51                                             --------->AHL20(2)                       --------->AHL20(2)          --------->ARR11(3)          <---------ANAC46          xxxxxxxxxxxxxxxx>smallRNA(i)        < >HSFB2a(2)                *TSS      <---------LBD16  <---------ZAT6           <---------YAB1      -- -HSFB2a(2)              <---------YAB1--------->LBD16----------->GT1<---------AHL20(2)<--------ATHB1   aaatgtattgaatatgttgatgtgagtataatttgtgtttgcggaaataatatatagagtaaatgtttcatttttttttttttgataaataattgataga  8502300                                                                                  --------->AHL20(2)                                                                           ----------->GT1                                                                           <---------ZAT6               --------->AHL20(1)                                        <---------ZAT14               --------->AHL20(2)                                      --------->ZAT18               <---------AHL20(1)                                      <---------ZAT14              <---------ATHB12                                         --------->ZAT14          ------------>CBF                                           <---------------AtSPL8         >>>>>>>>>MYB2                                              <---------ANAC46         ------------------------>ANAC81    --------->ARR14(2)      <---------ANAC58                - ------------CBF                            <---------ARR14(2)      <---------ANAC58       --------->CCA1(2) ------->ATHB12<---------AHL20(2)<---------WOX13(1)             --------->CCA1(2) --------->YAB1    -   gtaattgggaaaaccaataaaatgcaaaacgagtaattgacaacaggttccacagtgagcgagaagagatgggtgtactgtgaataatataagagatgag  8502400                                                      --------->DAG2                                                     ---------->DOF2                                                  <---------ANAC55(2)                                                  <---------ANAC58                                                  <---------ANAC58                                                  --------->ANAC55(2)          --------->AHL20(1)                                                  <---------ANAC46             <---------AHL20(2)                                                  --------->ANAC58             <---------AHL20(1)                                             <---------ICU4                    --------->AHL20(2)                                          <--------ATHB1                      --------->AHL20(2)                                          --------->ATHB51                    <---------ATHB12                      --------->ANAC58    -------->HAHB4              <---------AHL20(2)                      --------->ANAC58    <---------ICU4              --------->AHL20(2)                     <-------TEIL        <---------ATHB51          <---------AHL20(2)        --------->ANAC58                 --------->AHL20(2)     --------->TOE1(3)        --------->ANAC58           ----------->GT1<---------ANAC55(1) <---------ATHB51   <---------YAB1    --------->ZAT18--------->DOF5.7(2)   ----------->GT1 --------->AHL20(2) ---------->HVH21 <---------ANAC46----------->GT1 --------->ANAC58--------->AHL20(2) ---------->TGA1 <---------------AtSPL8  <---------AHL20(2)     --------->TOE2(3)   acatgacgataagaaatgtgaggtacacaagaatagacgttaaataattgttacgtaaagtcgtaacattaaataattcaataaattagcaaacatatat  8502500                                                                                                  ---                                                                                            <--------                                                                                            ---------                                                                                           ----------                                                                                      <---------ARR11(3)                                                                                      <---------GLK1(2)                                                                                      --------->ARR14(2)                                                                                      <---------ARR14(3)                                                                                      --------->ARR14(3)            <-----------GT1                         <-----------------AGL1          ----------->ARR10       <---------YAB1                  <---------TOE2(3)                        ------>NtERF2    ----     <-----------GT1                  --------->MYB52(1)                   <---------WOX13(1)--------     --------->ZAT6<---------MYB46(3) <-----------GT1--------->LBD16    <---------YAB1--------->ARR11(3)   agctgtatcactattcactagttgttgacaaatatttgaataacgattttcatgcccgagattgggaacagtttctaattgccaccaagattttccacaa  8502600     ------->TEIL     --------->ARR11(3)    <---------CCA1(2) ------>DAG2                                                         <---------AHL20(2) -------AGL15                     <---------ICU4                 <---------AHL20(2) ------>AGL15                    <---------YAB1                 --------->AHL20(1) ------->AGL3                    <---------ATHB51               <---------AHL20(1)                  - ------>DOF2                   --------->TOE2(3)          ----------->GT1                   --------- ->LBD16                       --------->YAB1        --------->YAB1<---------AHL20(2)<-----------GT1-   aaagttgtatcttggtgatagctatagtttcaacgataattgtccagtcttccaacaatattgttatatatttttttctaatgcatataacctcatgacg  8502700  Previous    Next  AGI:  At5g24770.1    Description:  VSP2 (VEGETATIVE STORAGE PROTEIN 2); acid phosphatase. Identical to Vegetative storage protein 2 precursor (VSP2) [Arabidopsis Thaliana] (GB:O82122;GB:O23828); similar to VSP1 (VEGETATIVE STORAGE PROTEIN 1), acid phosphatase [Arabidopsis thaliana] (TAIR:AT5G24780.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45798.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN82027.1); contains InterPro domain Vegetative storage protein/acid phosphatase (InterPro:IPR014403); contains InterPro domain Plant acid phosphatase; (InterPro:IPR010028); contains InterPro domain Acid phosphatase (Class B); (InterPro:IPR005519) Range:  from: 8500479    to: 8502227    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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