Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                 <---------------AGL15               --------------->AGL15                                    <-----------------AG<--------   <--------ATHB1                                                       =============================   --------->YAB1                                            --------->AHL20(2)       --------->YAB1  <---------YAB1                                           --------->YAB1   <---------ARR14(2)  --------->ICU4 --------->AHL20(2)              --------->CCA1(2)      <-----------------AGL1  <---------ATHB12                              --------->ARR11(3)      <-----------------AGL3 ------ -------->YAB1 ===========================================================================MADS_MADS ->GT1 <---------AHL20(2)                       <---------ARR11(3)  --------->TOE2(3)<---------ATHB12   aacaatgatttttttttgtttatatagaaattttccaaggagaaattcaagatttagacaaaaataaaaacctctacatatttggcaatgatataaacca  8440800                  =============================HOX2a_HOX2a     <---------ARR14(2)     --------->ARR14(2)    <------ZmHOX2a(1)                              <---------ARR11(3)                               <    =====================HOX2a_HOX2a    <----------DOF2                                      --------  <---------TOE2(3)                    --------->TOE2(3)                                     --------  <---------TOE1(3)                 ------>MYB83  --------->RVE1(1)                          <------- ---GT1<-------TEIL             ------->TEIL      --------->CCA1(1)             <------ZmHOX2a(1)   - ==========MADS_MADS  --------->MYB46(3)------>ZmHOX2a(1)                    <------NtERF2   <------- --------->AGL15  ------>ZmHOX2a(2) ------>MYB46(1)--------->ARR11(3)  <------NtERF2--------->CCA1(2)   atttgaggatacatatatgatccaacaatctaagaacctatcctttacacaaatatctattctagggagaggcagagtcggaggagaaacgagagagctg  8440900                                                 <-------TEIL                              <xxxxxxxxxxxxxxxxsmallRNA(s) <---------ZAT2                             --------->YAB1     --------->GLK1(2)                             <-----------GT1    --------->ARR14(1)               <---------GLK1(2)  -                         <xxxxxxxxxxxxxxxxsmallRNA(s)      --------->ZAT2      ----------->ARR10    < ---------MYB46(3)     ----------->GT1          --------->CCA1(2)            ======================== ->ZAT2              <---------ZAT14           --------->ARR11(1)   --------->At4g35610            -- ->At4g35610         --------->ZAT18           <---------ARR14(2)   <---------At4g35610    --------->At4g35610 --At4g35610    <---------ANAC58               <---------GLK1(2)<------NtERF2---------->DOF2     ---- -------->MYB52(2)  --------->ALFIN1  <xxxxxxxxxxxxxxxxsmallRNA(s)  --------->ZAT2         <---------At4g35610 --ZAT2         <---------ANAC58  ------->TEIL --------->ARR14(2)   <---------ZAT2      ------>ZmHOX2a(1)   gtttgttagaaagatgatgcgagtgtggtaatcacgagcctggtctaaagattcggcttcaagctcggcaagctgagagcaaagatgctcctcagcctcc  8441000             ------>ZmHOX2a(1)         <---------ZAT18    ==========================================bZIP_DOF    <---------O2    --------->O2    --------->TGA1a    --------->ZAT2    <---------ZAT2    ----------->RAV1(2)    ============================MYC_MYB    <---------TGA1a                                     <---------DAG2                         ------   ------>NtERF2                                        <----------DOF2                     <--------  <---------ALFIN1<---------ALFIN1                <---------ALFIN1                   <---------At4g35610 --------->MYB46(3)           <---------ARR11(3) --------->MYB46(3)              <---------ANAC58 -------->At4g35610          --------->REM1(1)  ------>ZmHOX2a(1)                <---------ANAC58 ---------At4g35610        ----------->RAV1(1) --------->ANAC46                <-----------HVH21 =============bZIP_DOF  ------->GAMYB      <---------At4g35610                <-----------RAV1(1) ------->ANAC46   --------->ANAC46      ------>ZmHOX2a(1)       <---------CCA1(2)<---------ANAC46  -- -->ZmHOX2a(1)  ------>ZmHOX2a(1)  <----------DOF2--------->AtMYB61     <---------MYB52(1)------>ZmHOX2a(1)   tcagccacctgtgtcctcctccacaactgcaacatctctttcctcatctcctccaccgctttctccatctctccgttcttctgtcgtagctcctctacct  8441100           <-----------HVH21          --------->AtMYB61         --------->MYB46(3)       <---------ALFIN1       --------->DEAR3(1)      --------->ERF1      --------->ATERF1(1)      <------NtERF2     <---------ATERF1(1)     ------>NtERF2     <---------RAP2.6(3)    --------->ANAC46    --------->RAP2.3(3)    --------->RAP2.6(2)    --------->ANAC58    --------->DEAR3(1)    --------->ANAC58    --------->RAP2.3(2)    <---------ATERF1(2)   --------->RAP2.3(1)   --------->ATERF1(1)                                               <---------GLK1(1)   --------->ERF1                                                  <---------ICU4  <---------ATERF1(1)                                   <---------TOE2(3) --------->ARR14(2)            ---------->ID1        <---------AHL20(2) <-----------GT1 <---------ARR14(2)         <---------DAG2       <---------AHL20(2)--------->ATHB12 --->TOE2(2)                <----------DOF2  <----------DOF2      <---------YAB1 -ALFIN1------>NtERF2    ------>ZmHOX2a(1)  <------------------------ANAC81     <----------DOF2   <-- ------->LBD16       <-----------GT1    <-----------GT1 <---------TOE1(3)  <----------DOF2      <----   ccgaagccgccaccatcacatagtttcctccttttcccattttctctctttttattttatggtttttgatgatttctcttttctttgtttttgtgtctct  8441200                                                                                  <---------ARR14(2)                                                                                  --------->ARR14(2)                                                                               <------MYB83                                                                               <------MYB46(1)                                    <---------MYB46(3)                         <---------ANAC46                                   --------------->AtSPL8                     <---------MYB46(3)                                   <---------WOX13(1)                         --------->MYB55(2)                                  <------------CBF                           <---------ANAC46                                 --------->ATHB12                            <---------MYB55(1)                      <----------DOF2      <-----------TBP                 <---------MYB46(3)                     *TSS       <---------AHL20(2)                         <------MYB46(1)                   <---------------AGL15  ------>ZmHOX2a(1)                <------MYB83                   --------------->AGL15 --------->TOE2(3)                 --------->MYB55(2)                  <-----------------AG   --------------->AGL15            --------->ALFIN1          xxxxxxxxxxxxxxxx>smallRNA(i)   <---------------AGL15            <---------AtMYB61         xxxxxxxxxxxxxxxx>smallRNA(i)    <---------ANAC46                 <---------DEAR3(1)      <------------------------ANAC81--------->KAN4(2)--------->ARR14(2)<---------ANAC46     <-----------RAV1(1)       <---------WOX13(1)     <---------ARR14(2)<---------ANAC58           -- <----------DOF2  <-----------------AGL1----------------->AGL3          <---------ANAC58         <--- <---------DAG2   =======================================MADS_MADS     --------->MYB55(2)       <---- ---------GT1     <-----------------AGL3----------------->AGL2      <----------DOF2            ------ ------DOF2      <<<<<<<<<TBF1<------------CBF       <---------MYB52(1)<---------MYB46(3)     <------   ttactttttgttgttgttcttcttcttttggtaattgattgttccttatatagccgtttctgcgactagtctttgggtggtgggtatatgtctagattca  8441300                                                                                                   <-                                                                                                   <-                                                                                               ======                                                                                               ------  --------->ARR11(3)       <---------YAB1                                                      ------  <---------ARR11(3)       <---------TOE2(3)                                                  <------ZmHOX2a(2) <---------GLK1(1)         <---------TOE1(3)     --------->HSFB2a(2)   <---------ICU4        <------- ------->YAB1       <---------YAB1     <-----------GT1       ---------->ID1                  -------- ------WOX13(1)<---------ANAC58 ----------->GT1  <---------HSFB2a(2)   --------->YAB1      <---------MYB46(3) --------CBF   <---------ANAC58 --------->MYB52(2)  <<<<<<<ZML2       --------->ICU4    ------->MYC3- --->ATHB12   ---------->ID1  <--------P       ------>ZmHOX2a(1)   <---------AHL20(2)   <-------MYC3- -TEIL       <-----------GT1  <---------MYB52(1) --------->HSFC1(1)--------->AHL20(2)  --------->ANAC46   ttgatatctcttgtttttcgttcttatttatggttagttattttccttcctctagaacattttgtttttttaattatgttccgatatacacgttggatcc  8441400                                                      --------->KAN4(2)                                                     <----------TaMYB80                                                     --------->GLK1(1)                                                     <---------KAN4(1)                                                     --------->KAN4(1)                                                     <---------GLK1(1)                                                    <---------ARR14(2)                                                    <---------ARR11(3)                                                    --------->ARR14(2)           ---------->DOF2         ----------->GT1                            --------->ARR11(3)       <----------DOF2 --------ATHB12                                    <------ZmHOX2a(1)         ------>ZmHOX2a(1) --------ATHB51                                   <------MYB83               <---------------AGL15 ============================================================================================MADS_MADS >ZmHOX2a(2)                                      <------MYB46(1)           --------------->AGL15 ----------->AGL3                               <--------P                 ----------------->AGL3 --ARR14(2)                               --------->CCA1(2)               <---------ATHB12 ->ARR14(2)                              --------->ARR11(1)              ------>MYB46(1) -------->AHL20(2)                       --------->ARR14(2)              ------>MYB83 -------->YAB1    <----------DOF2        <---------ARR14(2)            --------->AtMYB61         <---   aataatataacatgtgaattctttttagcaaaactattttgtagatttgggtaggatattcgaaaactttagaccaatccttttaaaggagactatatta  8441500                               --------->ANAC58                               --------->ANAC58  <----------DOF2                      <---------ANAC58                       --------->YAB1       ------->TEIL     --------->AHL20(2)       <---------ANAC58                       -------->HAHB4   --------------->AtSPL8               <---------TOE2(3)    ------->TEIL      <---------YAB1    <---------------AtSPL3               <---------TOE1(3)   <--- <---------ATHB12   --------->YAB1      <---------------AtSPL8       <---------AHL20(2)         ----- ------YAB1      <----------DOF2     --------->AHL20(2)    <----------DOF2  ---------->DOF2     <----   ctaatgaatctattgtaggctttaataatagggaggccataaaatgtacttctttcattttcttttaatatttgattttaaagtttttgcataccgatta  8441600                                                                                         --------->YAB1                                                                                         -------->HAHB4                                                                                        --------->ICU4                                                                                        <---------YAB1                                                                                   --------->ANAC58                                                                                   ----------->GT1                                                                                   <---------ANAC46                                                                                   <---------ANAC58             <---------ICU4                                                        <---------ANAC58             --------->ATHB12   <---------AHL20(1)                                 --------->ANAC55(2)     <---------YAB1             --------->AHL20(1)                                 --------->ANAC58   --------->AHL20(2)           --------->AHL20(2)                 <---------ICU4  <---------ANAC55(1)   <---------AHL20(2)           <---------AHL20(2)           ----------->GT1       --------->ANAC55(1)   --------->ATHB51  <---------ANAC46          <---------AHL20(2) --------->ICU4   <---------ANAC55(2) ------TOE2(3)       <-------GAMYB         --------->ANAC46  <------MYB46(1)     <-----------GT1 ---->MYB52(1)    <---------ANAC46  <-----------RAV1(1)      <------MYB83    <---------TOE1(2)    <-- -------GT1 <---------YAB1     --------->AHL20(2)           --------->MYB59  <---------TOE2(2)    ---   acgaattatttttgatcattgtgggttgaagtattaaattgttgcacataatattgtagtatttggtaattttgactcttatgttacgtaataatagtac  8441700  Previous    Next  AGI:  At5g24655.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G24660.1); similar to unknown protein [Brassica rapa subsp. pekinensis] (GB:AAQ92331.1) Range:  from: 8440697    to: 8441221    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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