Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                       ------->MYC2                                     ------->TEIL                                     <-------MYC3                                    <---------ALFIN1                                     ------->MYC3                                   --------->ZAT18                                     <-------MYC2                                   <---------ZAT14                         --------->TOE1(2)                                          <---------ZAT18                         <---------LBD16                                          --------->ANAC46 --------GT1           ------->TEIL------->TEIL       <-------MYC3        ------>ZmHOX2a(1) --->AHL20(2)   ---------->DOF2  <-------TEIL         ------->MYC3 ------>ZmHOX2a(1)--------->ZAT14<-   aacaacatggatgaagtagaaagtgaacctggaaatgcatgtgtgaaattgtcccatatgcttagactcctccctccttcttctactgcaccttcatact  8387600                --------->TOE2(3)               <---------ANAC46               --------->ANAC58               --------->ANAC58               <---------ANAC55(2)               --------->ANAC55(2)               <---------ANAC55(1)                                                     <---------ARR11(3)      --------->ARR14(2)                                                               --------->ARR11(3)      <---------ARR14(2)                                         <---------YAB1        <---------AHL20(1)   <---------ANAC46                                             <---------TOE2(3)      --------->AHL20(1)   <---------ANAC58     <-----------GT1                        <-----------GT1  ---------->DOF2   <---------ANAC58  --------->YAB1     <-----------GT1   <---------AHL20(2)<----------ID1   <------- ---------DOF2 ----------->GT1    ----------->GT1<---------------AGL15    ---------->DOF2 <---------AHL20(2)   gcatttcgtatacgcttacgtaaatataactcaatacggttttaactatttctaaactatgtaatttacgattcaaaaaagaaaaagaatattttctttt  8387700                                                               ---------->DOF2                               --------->AHL20(2)   ------>MYB46(1)                      <---------AHL20(2)            ------>MYB83 --------->DAG2       --------->ANAC46    --------->AHL20(2)     <---------MYB59<---------TOE2(3) ---DOF2          <---------ZAT6  ---------->DOF2 --------->AtMYB61            ----------->HVH21   aatctatatacagaatgctagttttaaaatgaattaaaaagggttattgagaccaaacacaaaaaaaaaggttattgagacatgaccctaagaccagtcc  8387800                                                                      ------->GAMYB                                                                     --------->MYB46(3)                                           --------------->AtSPL3    <---------MYB52(2)                                       <---------YAB1              --------->MYB52(1)                                    --------->At4g35610          <---------MYB52(2)                                --------->ANAC58          ----------->GT1        --------->At4g35610                                --------->ANAC58         --------->DAG2          <---------LBD16                                --------->ANAC46     <---------ANAC55(2)      ---------->DOF2 -------                         ----------->GT1--------->ATHB12---------->DOF2 ------->TEIL        ---------   gaaatatagttgcacttgtgaaacctattgttacaagcagcatcattcgtacattacataaagtataactaacgaacctgataagcggaagaggcaacac  8387900                                                           ------>ZmHOX2a(2)                                                          --------->CCA1(2)                                                          <------ZmHOX2a(2)                                                         --------->ARR14(2)                                                         <---------ARR11(3)                                                         <---------ARR14(2)                                                         <---------ARR14(3)                                                         <---------AGP1                                                         --------->ARR11(3)                                                         --------->AGP1                                                         <-----------ARR10                                                  --------->TOE1(3)                                                  --------->TOE2(3)                                                --------->GLK1(2)                                                <---------ARR11(3)                                                --------->ARR11(3)                                          --------->HSFB2a(2)           <---------ALFIN1                                          <---------HSFB2a(2)  <---------ANAC46                                        ----------->GT1 --------->RVE1(1)                          --                        --------->YAB1  <---------REM1(1)--------->ARR14(3)                   -------   --------->YAB1 --------->ANAC58  =============================HOX2a_HOX2a           <---------ALFIN1 -->REM1(1)       --------->ANAC58  <------ZmHOX2a(1)---------->DOF2  ----------->RAV1(1)     <------ -->RAV1(1) <------ZmHOX2a(1)       ==============================HOX2a_HOX2a  <---------ATHB12 <----   caaaatcaaaatgaggagggaagctataacgatttagaggagttgtagaaaatcttaaagatctgccctgtgcaacatcccatgatgctacacatagtgt  8388000                                            ----------->GT1       --------->ZAT18                <---------MYB52(1)       <---------ZAT18               --------->TOE2(3)       <---------ZAT14              ----------->GT1       --------->ZAT14             <---------TOE2(3)  <---------YAB1                 ----------->HVH21                   <----------DOF2 ------->ICU4                  <---------ANAC58        <---------GLK1(2) ---->GT1           <---------WOX13(1)--------->DOF5.7(2) --------->TOE2(3) ---ZAT6        <----------DOF2<---------ANAC58--------->YAB1       <---------ANAC58       <---------ARR11(3) -----YAB1    --------->At4g35610----------->TGA1 <-----------GT1   <---------ANAC58       --------->ARR11(3)   gattactagtgcaatgagcttaattgccatattccttgacgttaattagttataacaaattcttagttttgcttttatttgagagagactgaagatgttt  8388100                                                                <---------TGA1a                                                                --------->ANAC58                                                                --------->O2                                                                <---------O2                                                                --------->TGA1a                                                                --------->ANAC58                                                                --------->ANAC46                                                           --------->ZAT18                                                     --------->STY1(2)                                                     <---------ZAT2                                                     <---------STY1(2)  <------------CBF                                                    --------->MYB111(2)------>ZmHOX2a(1)                                                   =======================MYC_MYB                                            ---------->DOF2<---------ZAT18   ------->TEIL              --------->TOE2(3)             ==============================bZIP_DOF            <------ <------ZmHOX2a(1)    ------->TEIL <-----------TBP <--------P <---------ALFIN1     --------->AHL20(2)   agaggaatttgagaaatgttaatgcatccattttctcttatatagagaaagaggtagctagggcacacgcgtcctattgaatctttaaaatagtattttt  8388200                     <---------ANAC58                <---------ICU4                --------->YAB1                <--------HAHB4                --------->ATHB12         <----------DOF2               --------->ICU4       <--------P               <---------YAB1      <-------GAMYB             --------->YAB1        <---------ANAC58         <---------AHL20(2) --------->ZAT14                                        <---------MYB52(1)        --------->AHL20(2)  --------->ZAT18                                       --------->At5g28300        <---------AHL20(2)  <---------ZAT14    --------->MYB46(3)                ----------->GT1    <     --------->WOX13(1) <---------WRKY18(1)  <-----------GT1                  ------------>MYB.PH3(1)   ------------>CBF  <---------ANAC58   <---------DAG2                  --------->ATHB12         <--- ---AHL20(2)<---------AHL20(2)     <---------ANAC58                    --------->ICU4  <-----------GT1   ttgttagcaattaaataatcatttcttgactgaactgggttgccttttaacgactaaatgaagttcaagtggaatgattcaaacggttatttccattttg  8388300                                                                                        --------->TOE2(3)                                              --------->TOE2(3)                        --------->REM1(1)                                             --------->ANAC55(2)                     ----------->RAV1(1)                                             <---------ANAC55(2)                  --------->ANAC58                                             --------->ANAC58                     <---------ANAC55(2)                                             --------->ANAC46                     --------->ANAC55(2)                                             --------->ANAC58                     --------->ANAC55(1)                                        ------>NtERF2                             --------->ANAC58                                       --------->DEAR3(1)                       <-----------GT1                                     ------>NtERF2                          <---------AHL20(2)                                    --------->ANAC58                        --------->AHL20(2)            <---------TOE2(3)       --------->ANAC46                        <---------AHL20(1)      <----------DOF2               --------->ANAC58                        --------->AHL20(1)      <---------DAG2            --------->ARR14(2)                     --------->ARR11(3) <------MYB83                  <---------CCA1(2)                       <---------AHL20(1) <------MYB46(1)            <---------At4g35610                        --------->AHL20(1)          <- ---------AtMYB61     <------------CBF<------NtERF2                <---------YAB1 --------->ANAC46<-- --------RAV1(1)  --------->ZAT6<---------ARR14(2)   --------->ANAC46  <---------ARR11(3)     -------   tgttggtgctttttaagaaaacactattgcagcatatcgcgccaactacgtaaacacagaacaagtattttgatatattttattacgcaacatcaataag  8388400                                                      <---------ANAC58                                                      <---------ANAC46                                                      <---------ANAC58    <---------TOE1(1) ---------->DOF2             --------->ALFIN1         <---------ANAC55(2) <---------TOE2(1) -----ZmHOX2a(1)      -------->P                     <-----------------------TaNAC69(2) --------ID1<---------HSFB2a(2)<---------ANAC46      <------NtERF2   <-------MYC3 -->YAB1 <---------YAB1      <---------ANAC46     <-----------HVH21  ------->MYC3                <---   aggaaaagcttattttagaagacttaccaaggtgtgtgtttcaaaatgtctcggtcgcgtgtattagaaaacgtgtacgagatttgtcaacaaaacaata  8388500  Previous    Next  AGI:  At5g24540.1    Description:  glycosyl hydrolase family 1 protein. similar to glycosyl hydrolase family 1 protein [Arabidopsis thaliana] (TAIR:AT5G24550.1); similar to DIN2 (DARK INDUCIBLE 2), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT3G60140.1); similar to glycosyl hydrolase family 1 protein [Arabidopsis thaliana] (TAIR:AT2G44460.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21978.1); contains InterPro domain Glycoside hydrolase, catalytic core; (InterPro:IPR013781); contains InterPro domain Glycoside hydrolase, family 1; (InterPro:IPR001360) Range:  from: 8384879    to: 8388030    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version