Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                         <---------DEAR3(1)                    --------->O2                    --------->bZIP60(2)                    --------->ANAC58                             <---------MYB46(3)                    --------->ANAC46                            --------->ALFIN1                    =======================bZIP_DOF          <---------DEAR3(1)                    --------->ANAC58             --------->ARR14(2)    --------->MYB52(1)                    --------->TGA1a        --------->ATHB51  <---------DREB2C(2)                    <---------O2          --------->ICU4     <---------ANAC46                    <---------TGA1a    <------NtERF2       --------->MYB52(1)                     <--                  <---------ALFIN1    ------>NtERF2       ----------->TGA1                        ---               --------->ANAC58      --------->RAP2.3(2)<---------At4g35610                    ------               --------->ANAC58      --------->ANAC46   --------->At4g35610                   -------            <------NtERF2            --------->RAP2.3(3)<---------ZAT2<---------ARR14(2)     --------            --------->ATERF1(1)      --------->RAP2.6(2)--------->ZAT2--------->ARR14(2)     <-------          --------->ALFIN1          --------->RAP2.3(1)<---------TOE1(2)                     <-------          <---------DEAR3(1)        --------->ERF1    <-----------RAV1(2)                 <----------         <---------LBD16 <------NtERF2<---------RAP2.6(3) ----------->HVH21               <---------SPL7    ==========================MYC_MYB--------->DEAR3(1)<---------TOE2(2)                 <---------ANAC58    <----------CDC5------>NtERF2---------->DOF2  <---------ARR14(2)  <------ZmHOX2a(1)   <---------ANAC58   ctcgaggctgaggcggagcgccacgtcgtcgtctcaaagccgccataatcggtttcgcaggtgacggtggaggaaacggccatttgaacttccgtcccgg  8342700                                  ------->GAMYB                               <---------DOF5.7(2)                               --------->MYB52(1)                              ----------->HVH21                             <-----------HVH21                             --------->DOF5.7(2)                            --------->LBD16                            <---------DEAR3(2)                                           <---------LBD16      <---------DEAR3(1)   --------->ATERF1(2)                                          --------->MYB52(1) -------GLK1(1)            <---------ATERF1(2)                                          -------->P ------>GLK1(1)          --------->LBD16                                        <---------HSFB2a(2) --->LBD16               ------>NtERF2                                          --------->HSFB2a(2)<- -->LBD16               --------->ANAC46                         --------->WRKY38(1)--------->ANAC58 ->HSFB2a(2)    <---------At4g35610                              --------->WRKY12   --------->ANAC46 --HSFB2a(2)<---------REM1(1)<---------MYB52(1)     <---------TOE2(3)     <------ZmHOX2a(1)--------->LBD16 --LBD16 ----------->HVH21<------NtERF2    ---------->DOF2     --------->At4g35610  --------->ANAC58 -HVH21--------->LBD16 <---------LBD16<----------DOF2----------->GT1   <-----------RAV1(2)------->GAMYB   agttctcgccggtgatggagctactcccgccggtaacgggctttggaaagggctaatgttatatgagttgacttcaggagtaccagaagcaaccggagac  8342800                                                                 =================HOX2a_HOX2a                                                                 ------>ZmHOX2a(2)                                                                <---------GLK1(1)                                                                <------ZmHOX2a(2)      --------->ARR11(3)                                                                ==================HOX2a_HOX2a                                                                --------->GLK1(1)      <---------ARR11(3)                                                               --------->ARR11(3)   <------NtERF2                                                               <---------ARR11(3) <---------ANAC46                                                               <---------ARR14(2) <---------DEAR3(1)                                                               --------->ARR14(2)<------NtERF2------>NtERF2                                                               <---------ARR14(3)<---------LBD16                                                            <------NtERF2       <---------RAP2.3(1)                                                          --------->ALFIN1      <---------ATERF1(1)                                                          <---------ANAC46      ------>NtERF2<-------                                <---------WOX13(1)       <---------MYB52(1)    <---------RAP2.3(2)                              ----------->GT1        --------->MYB52(1)        <---------RAP2.3(3)                 <---------MYB52(1)                  <---------DOF5.7(2)    ----------->HVH21<-------               <---------ANAC46 <--------P         --------->DOF5.7(2)     ------>ZmHOX2a(1)<--------               <---------DREB2C(2)                 ----------->HVH21       <---------HSFB2a(2)-------               <---------DEAR3(1)        --------->ARR14(2)<---------MYB46(3)  <---------DEAR3(1)----  <---------ARR14(2)          <---------MYB46(3)   <---------MYB52(1)  <---------SPL7----------->ARR10 <------ZmHOX2a(1)           <---------AtMYB61    <-------GAMYB--------->ARR14(3)--------->ATERF1(1) --------TOE2(3)--------->LBD16<-------GAMYB      <-----------HVH21  ---------->ID1--------->LBD16---   tgaggaatcgaagcatgccggtgattttgagatggttgattcgaaacctcgccgttaccggtggggatctcgtcgtcctcgacggcggagatgttccggc  8342900                                                                             --------->DEAR3(2)                                                                      --------->ALFIN1                             <---------At4g35610        ---------->DOF2    <---------ARR14(2)   <---------ICU4    <---------ANAC58                  <---------WRKY45    --------->ARR14(2)  --------->ICU4     <---------ANAC58          <-----------HVH21   <---------DEAR3(1) --RAP2.6(2)        --------->ATHB12          <------MYB46(1)     <---------ORA47(1) --ANAC46          --------->WRKY38(1)        <------MYB83        --------->SPL7                   -- -LBD16           <---------MYB52(1)        <---------WOX13(1)  <---------SPL7                    --- -->LBD16    <---------WRKY18(1)          --------->ATHB12      ----------->HVH21          ---------- ------->GT1----------->HVH21--------->At4g35610       <---------WRKY38(1)<------ZmHOX2a(1)<--------- ------>At5g28300<-------GAMYB          <---------WOX13(1)    --------->At4g35610         -----------   tgtaacaatgacccatgaccgttgattgtgaagctcaaattgactgattggtcagagtcaaagcatcggacggtgaggaaccgaagatgaatagggaaaa  8343000                                         <---------AHL20(2)                                    <---------AHL20(1)                                    --------->AHL20(1)                                   <---------AHL20(2)                           <-------TEIL<---------AHL20(2)                                 <----------ID1 ------->YAB1          <---------YAB1<---------AHL20(2)                                   ----------- ------>AHL20(2)<---------YAB1   --------->AHL20(2)                        --------->At4g35610 ------ ->GT1         <---------TOE2(3)--------->AHL20(1)               ----------->GT1         <---------TOE2(3) -ID1        <---------AHL20(2) <---------AHL20(1)            <---------ATHB12         ---------->DOF2 >GT1       <---------AHL20(2)  <---------ARR11(3)     <----------ID1 ---------->DOF2 <---------AHL20(2)   ataaaaattgtttttttaatgaatgaagattcaatatatatatttttttttggcaaaaaaacaaatgaagaaaaaagagctcagagatttaaaggaaaaa  8343100           <---------MYB46(3)           ----------->GT1                                            <------------CBF         <---------MYB52(1)                                         <---------AHL20(2)       <---------ANAC58                                             <---------YAB1       <---------ANAC46                                             --------->AHL20(2)          <----       <---------ANAC58               <------NtERF2              --------------->AGL15   --------->AHL20(2) >GT1*TSS<-------GAMYB  --------->ZAT18                          <----------DOF2         <---------AHL20(2) ---->DOF2 --------->MYB52(2)      <------ZmHOX2a(1)       --------->YAB1               --------->AHL20(2)   agagagaaggcgtttgttaaatgaagaccactaagaaggaggcaagagcgcgtagtggcattaatcacttttaattgtatgttaatttcatttaatgact  8343200                  <---------MYB46(3)                 <---------WOX13(1)                <---------ANAC58                <---------ANAC58                            <-----------GT1               --------->ATHB12                 <---------AHL20(2)         --------->YAB1                 ---------->DOF2--------->AHL20(2)        --------->ICU4             <----------ID1     --------->AHL20(2)                       ------        <---------ATHB12         --------->MYB52(1)   <---------AHL20(2)---------->DOF2        ------       <---------TOE2(3)  ----------->GT1       --------->AHL20(2)   ------>MYB83              <----- ------DOF2   <---------YAB1     <---------DOF5.7(2)--------->YAB1   ------>MYB46(1)     <------ZmHOX2a(2)   ttcacatctaatgatgttgattgttgaattgaaattaacgacgaaagaaattaaaaataatttttctgacctacaaaagtactgaaattagatcaaattt  8343300                                                                <---------AHL20(2)                                  <-----------GT1               --------->AHL20(2)                             --------->ICU4              --------->HSFC1(1)                          ----------->GT1                <---------HSFC1(1)                        ----------->GT1                  --------->HSFB2a(2)                 <---------------AGL15             <---------------AGL15     --------->AHL20(2)<---------TOE2(3)           <----------DOF2                                  -     <---------AHL20(2)<---------TOE1(3)       <---------GLK1(2)--------->AHL20(1)              <---- --->AHL20(1)   --------------->AGL15<----------DOF2     <---------HSFB2a(2)                    ----- --->AHL20(2)   <---------MYB59  --------->AHL20(2)--------------->AGL15   <---------AtLEC2     ----- ----AHL20(2)   ===================================================MADS_MADS             ----------->GT1   tttaaaattatatgtttgcctaattaaggtgaaaattaacttttacattgattctttttctagaaattttttgttttgcattgtaagcatatagaaaata  8343400                        <---------AHL20(2)                                                      <----                  ----------->GT1                                                               <----                  <------MYB83                                                                  <----                 --------->MYB59                                                      <---------ICU4                 --------->MYB111(1)                                                  --------->YAB1                 --------->MYB46(2)                                     <---------AHL20(2)  <--------             <---------TOE2(3)                         <---------ARR11(3)<---------YAB1   <---------ARR11(3) -------->AHL20(2)<------MYB46(1)          --------->TOE2(3)      --------->YAB1     <---------ATHB12 -----AHL20(2)   --------->MYB111(2)      <---------ICU4 ------>ZmHOX2a(2)  <---------YAB1--------->ARR11(3) ---->AHL20(1)  <---------MYB55(1)       --------->ICU4--------->ARR11(3)<---------AHL20(2) <-------- ---->AHL20(2)  <--------P          ----------->GT1 <--------P <----------DOF2       --------->ICU4--   aaataaaaactaatagaggttggtattttttttttatgtggtaaacattaatgggttgatcttaactttcatatttttattagtgaaatcattatcttgc  8343500                                                          --------->AHL20(1)                                                          --------->AHL20(2)                                                          <---------AHL20(1)                                                       --------->YAB1                                            <---------ANAC55(1)                                            <---------ANAC58                                            --------->ANAC55(2)                                            <---------ANAC55(2)                                            <---------ANAC58                                         <---------ARR14(2)                <---------ATHB51   --------->ANAC58                 ------------>AtMYB77  <---------AHL20(2)<---------ICU4   --------->ANAC58                 ------------>MYB.PH3(1)                --------->AHL20(2) -----ANAC46                  <---------TOE2(3)  ----------->GT1           <---------AHL20(2) -----ANAC58            --------->AHL20(2)  <---------ANAC46  <---------AHL20(2) -----ANAC58           <---------AHL20(2)<---------MYB52(1)  --------->AHL20(2) -ANAC58              --------->AHL20(2) --------->ARR14(2)  <---------AHL20(2)--------->YAB1 -ANAC58              <---------AHL20(2)<-------GAMYB  --------->AHL20(2)  --------->ICU4 --------->GT1  --------->TOE2(3)--------->CCA1(2)  --------->YAB1       --------->YAB1           ---   gaggtaagaaactacatatgttaatttaaaataagataagacggttacgttttgtaataatattttaatttttaaaaataattagaagaatttctgtgtc  8343600  Previous    Next  AGI:  At5g24430.1    Description:  calcium-dependent protein kinase, putative / CDPK, putative. similar to calcium-dependent protein kinase, putative / CDPK, putative [Arabidopsis thaliana] (TAIR:AT3G49370.1); similar to calcium-dependent protein kinase, putative / CDPK, putative [Arabidopsis thaliana] (TAIR:AT2G46700.1); similar to calcium/calmodulin-dependent protein kinase CaMK1 [Nicotiana tabacum] (GB:AAL30818.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48591.1); similar to serine/threonine protein kinase pk23 [Lycopersicon esculentum] (GB:AAL87457.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domai Range:  from: 8339147    to: 8343105    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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