Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      <                                                                                                   --                                                                                                ----- ---------CCA1(2)               --------->YAB1      <---------CCA1(2)                        -------- ----TEIL                --------->TOE2(3)         ---------->DOF2                      --------->CCA1(2) ----ARR14(2)            --------->TOE1(3)      --------->TOE1(3)              ---------->DOF2  ----- --->ARR14(2)  <---------At4g35610              --------->TOE2(3)     --------->YAB1  --------->CCA1(2)   tcaaatctctaattcacagatgctaaaccctaaatcaaaacgttgcaaacccttaaatctcatggtttcgaatcaaaattcaaaagagagataagaacac  8331400                                                                                     --------->At5g28300                                                                                    <---------ANAC46                                                                                  --------->At4g35610                                                                                  <---------At4g35610                                                                                ------>ZmHOX2a(2)                                    ------->GAMYB                              --------->CCA1(2)                                   --------->MYB46(3)                          <------ZmHOX2a(2)                                 --------->MYB52(1)                           <---------ARR14(2)                           --------->LBD16                                    --------->AGP1                         <---------LBD16                                      --------->ARR14(2)       --------->ATHB12  <------NtERF2                                        --------->ARR14(3)  --------->LBD16       ------>NtERF2 <---------DEAR3(1)                      <---------ARR11(3) ---------LBD16         --------->MYB52(1)                                    --------->ARR11(3) ------->MYB52(1)      --------->DEAR3(1)                                    <---------GLK1(1) ---->ANAC58           <---------ALFIN1                  <----------DOF2     --------->GLK1(1) ->ZAT14              <---------ABI4(2)    ---------->DOF2                  ----------->ARR10 ---->ANAC58          --------->MYB46(3)--------->At5g28300          --------->MYB52(1)             <   tcaccggagtgatttgatgagagagccaccggagacaacgacggtgaaagcgcctctctctttacaaaacttatcggagagatctgctgtgaatttagcc  8331500                         --------->YAB1                        <------ZmHOX2a(2)                                                         ---                        ==================================HOX2a_HOX2a                             <--                       --------->ARR11(3)                                                     -------           <---------GLK1(2)                                        <---------ANAC58   <----------DOF2    <---------ATHB12   <---------ARR11(3)             <----------DOF2              <-----------GT1---  --------->WOX13(1)--------->HSFB2a(2)            ------>ZmHOX2a(1)<---------ANAC58  <---------DAG2 ---------ATHB12    <---------HSFB2a(2) <----------DOF2    ------>ZmHOX2a(1)     <----------DOF2  ---   aaatcaatcactaaattctcttcgagatcataaatctcgactcttttcttctcctcctttcctatatttgtcgtagccatgctctttacctttctccgag  8331600                        <---------ARR14(2)                   <------ZmHOX2a(2)                  --------->ARR11(3)          <---------ANAC58     --------->ATHB12   --------->ARR14(2) ------>GLK1(2)<--------P -------ARR14(2)  --------->ARR14(2)                                                           <----- -->LBD16 <---------ANAC58    <------ZmHOX2a(2)                                                ------ ------>ARR14(2)  --------->AGP1                                                              <------ ------>MYB52(1)  <---------ARR14(2)                                                     <---------YAB1   tatcggatgatttcttggtagatccagttccgatcgatgaaaccgagagcgattcgaagcgagaagaagtggaatgagagcaaatgagataattcttggg  8331700     --------->ALFIN1  --------->DAG2                      <------ZmHOX2a(1) ---------->DOF2                 --------->MYB52(2)                                        ---------- ----HSFB2a(2)              <---------TOE2(3)                                 --------->ANAC58 --->HSFB2a(2)              <---------TOE2(2)                                 --------->ANAC58 ---LBD16     ----------->GT1  <--------P           --------->GLK1(2)     >>>>>>>>>TBF1---------->DOF2   gaagaaagtggggagatggtgatttgaacgaaggttagtaggagaagagaagagaatcgagcgaaggaaacaagaagaagaagccattgaaaagaaagtg  8331800                                                                                         --------->TOE2(2)                                                                                      ------>MYB83                                                                                      ------>MYB46(1)                                                                                    --------->MYB46(3)                                                                                    --------->AtMYB61                     --------->ZAT18    *TSS                      --------->YAB1 ------>NtERF2                 --------->DAG2      --------->REM1(2)<------ZmHOX2a(1)         <---------ETT(1)                ---------->DOF2   <----------DOF2    <----------ID1             --------->DEAR3(1) >DOF2  <---------YAB1      <----------DOF2        <------ZmHOX2a(1) ---------->DOF2<---------MYB59<-   agagagcgtttttataggtaaagtgaacaactttgactttgtagagtctgagaggaggacaagtggattaataaagccttctccgaccaaacctgtgttt  8331900                                                        <---------MYB46(3)                                                     <----------DOF2                                                    ------>ZmHOX2a(2)                                                   <------ZmHOX2a(2)                                                  --------->ARR14(2)                                                  <---------ARR14(2)                                                  <---------AGP1                                                  <---------ARR11(3)                                                  --------->AGP1                                                  --------->ARR11(3)                                                 <---------CCA1(2)                                              ------>ZmHOX2a(2)                                             <------ZmHOX2a(2)                                            <---------AGP1   <---------ANAC58                                            --------->ARR14(2)                                            <---------ARR14(2)                                            --------->ARR11(3)                                            --------->AGP1--------->ARR14(2)                ---------           <---------YAB1                   <---------ARR11(3) <---------MYB52(1)           <-------- --------->MYB52(2)     <---------At4g35610<---------CCA1(2) <---------ANAC58   --------->ATHB12    < --------MYB52(1)       <---------ZAT2 --------->ALFIN1<---------TOE1(2)       <---------YAB1     <--   tgttagtttgtttatgagtctggtccagcttatgaactaatgtgtagatctagatctttggttccgttctggttcagttttatgatttggataagatgtt  8332000                                              <---------GLK1(1)                                              --------->GLK1(1)                           --------->LBD16                                        --------->ARR14(2)                               --------->DEAR3(1)                                      --------->LBD16                                   --------->MYB46(3)                                    ----------------->AGL1                            --------->ARR14(2)                           <------MYB46(1)   --------->ARR14(2)                     ----------->ARR10   <-------TEIL            <------MYB83 <---------ARR14(2) ----------->GT1  --------->MYB52(1) >ARR11(3)         <-----------------AGL3    <---------ARR14(2)            <---------ARR14(2)    ---- -ARR11(3)       ------>MYB83       <---------LBD16  <---------YAB1        --------->ARR14(2)-------- ------ZmHOX2a(1)------>MYB46(1)  <-----------GT1 <----------DOF2        ----------->ARR10<---------LBD16 -------TOE2(3)<---------MYB59 --------->MYB52(2)<---------DAG2        <---------ZAT14<---------ARR14(2)   taggattcatataagaaccgaacaaaatttggtttgtttccggttcggataccttttgattcggataatagagtgaagaaccggtttagaaccgcggtaa  8332100                             ------->GAMYB                     ---------->DOF2       ---------->DOF2        <-------GAMYB       --------->MYB46(3)               --------->TOE2(3)     --------->MYB46(3)       ----------->GT1      --------->ZAT6                   --------->TOE1(3)    -------->P        < <---------DEAR3(1)   ------>ZmHOX2a(1)                    -------->P --------->MYB52(1)    --------- ----->ICU4        <---------YAB1                         --------->MYB52(1)     --------->MYB52(1) - ->At5g28300      <-----------GT1     <-------TEIL      <---------MYB52(2)     <---------MYB52(2)   -   tgttcggctcggttacaaattatccttctaacagtcgaaatacatgaaaaattcttgaactaacctaaagactaactgaaaactaaccaaagtaaccaaa  8332200                                 --------->ARR14(2)                                 --------->MYB52(1)    <---------HSFB2a(2)          <---------ARR14(2)    --------->HSFB2a(2) <------MYB46(1)                                               <-------TEIL ---------AHL20(2)      <------MYB83  --------->ARR14(2)                   ---------->DOF2          < >MYB46(3)             --------->MYB59<---------ARR14(2)                  --------->LBD16   --------- -------->AHL20(2)     --------->MYB46(2)            --------->ANAC46    --------->HSFB2a(2)<------MYB46(1) -------->AHL20(1)   <---------MYB52(1)        --------->YAB1            <---------HSFB2a(2)<------MYB83   aattttttagaagtatttggatagttaggttagcctatcggttcttcgataatacccgaactgatatatatgcttccgaaagacaagtttcatttggtta  8332300  Previous    Next  AGI:  At5g24400.1    Description:  EMB2024 (EMBRYO DEFECTIVE 2024); catalytic. Identical to Probable 6-phosphogluconolactonase 5, chloroplast precursor (EMB2024) [Arabidopsis Thaliana] (GB:Q84WW2;GB:Q42135;GB:Q8LD77;GB:Q9FIN2); similar to glucosamine/galactosamine-6-phosphate isomerase family protein [Arabidopsis thaliana] (TAIR:AT3G49360.1); similar to unknown [Populus trichocarpa] (GB:ABK95228.1); contains InterPro domain Glucosamine/galactosamine-6-phosphate isomerase; (InterPro:IPR006148); contains InterPro domain 6-phosphogluconolactonase; (InterPro:IPR005900) Range:  from: 8330318    to: 8331840    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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