Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                              <-----------GT1                       --------->ICU4                     ---------->DOF2                    --------->ICU4                  --------->YAB1               ----------->GT1                                                                 ------               ------>ZmHOX2a(1)                                                             <-------             ------>ZmHOX2a(2)                                                        ---------->DOF2     <---------ATHB12--------->YAB1  ---------->DOF2 --------->YAB1                <------ZmHOX2a(2)- ---ID1    --------->ARR11(3)     <----------DOF2   <---------ATHB12              <---------ARR11(3)<   aaatccaaacattgatcctgtaataaagattaacccctttgaagcacaaatcaaatcatatagaaactgagaatgagatagagagatcaaaagagactaa  8329100                                                                                 <---------ANAC46                                                                               --------->MYB52(1)                                                                              ----------->HVH21                                                                              ----------->TGA1                                                                         --------->LBD16        >>>>>>>>>TBF1                                                   --------->ANAC46    --------->At4g35610                                   --------->ANAC58  --------->At4g35610  <-----------RAV1(2)                                     --------->ANAC58  <---------At4g35610 <------ZmHOX2a(2)                               ---------->DOF2     <---------ZAT14 --->MYB52(1)         --------->At4g35610      --------->ANAC58      --------->ZAT18 --MYB52(2)>>>>>>>>>TBF1        >>>>>>>>>TBF1  --------->ANAC58      <---------WRKY12        <------- -------->ARR14(2)    --------->ZAT2----------->GT1 --------->At4g35610<---------LBD16       -------- ---------ARR14(2)   --------->GLK1(2)       <------ZmHOX2a(1)       <---------WRKY38(1)    <------ZmHOX2a(1)   cggatcagaagaagaagaacaagaagctggagaagaagaagtaacaaggacgaaagcagaacgcaaatgagtccacggagatgacggagaagaaggattt  8329200                                                                                                -----                                                                                               <-----                                                                        ------->TEIL          ------- --ARR14(2)                                                 ------>ZmHOX2a(1)      ------>ZmHOX2a(1) ->ARR14(2)  <---------MYB52(1) <----------DOF2       ------>ZmHOX2a(1)<---------CCA1(2) --------->LBD16   ggaaacgtagacttcgtttgtattcttcgtagagctttcatcgaaacccaaaactccttctccttctctctctgtatctatcttcctcttccccaattta  8329300                        <---------SPL7                       <---------ANAC58                       <---------ANAC58  <---------GLK1(2)                      --------------->AtSPL3           --------->ANAC55(2)           --------->ARR14(2)           <---------ANAC58        ----------->HVH21      --------->LBD16           --------->HSFB2a(2) <---------ATHB12           ------>NtERF2           <---------ANAC58   ------>MYB83               <---------DEAR3(1)          <---------LBD16 --------->SPL7 <---------ARR14(2) ----->DOF2<---------HSFB2a(2)--------->MYB52(1)        <---------LBD16     <----------DOF2        <- ----AHL20(2)    <XXXXXXXXXXXXXXXXXXXXMIR416       --------->REM1(1)  --------->SPL7           ------ -->AHL20(2)--------->LBD16   ------>MYB46(1)   ------>ZmHOX2a(2)   --------->TOE1(2)          ------   aaggtccaaacttgcggaacaatgtccgtaccaatcggtaacagatttgatctacaactccggcgaaaaccatacgacctttcttctccgtcttagccgc  8329400                          --------->ZAT14                          <---------ZAT14                                  ----------->GT1                    <----------DOF2                                 ---------->DOF2             <---------ANAC58                                 --------->GLK1(2)             <---------ANAC58                                 --------->ARR14(2)            <---------HSFC1(2)                                <---------ARR14(2) --------MYB46(3) <---------At4g35610                        <---------GLK1(2)                  <---- --->LBD16  --------->At4g35610                           --------->HSFB2a(2)                *TSS---- >NtERF2    --------->HSFC1(2)             <-----------GT1<---------HSFB2a(2)       --------->YAB1<--   gttgttgaagaagtagcttccgcttctctgtagagagttgcgatttttctctctatctctctagaatctgaaaagagaagtcaaaatcagagtaaatggt  8329500                                                                     --------->ANAC58                                                                     --------->ANAC58                                                                     --------->ANAC46                                                             --------->AtMYB61                                                            --------->MYB46(3)                                                          <---------ALFIN1                                                       --------->ANAC46                                                       --------->ANAC58                                                  --------------->AtSPL3                                                  --------->ZAT6     <---------ANAC55(2)                             <----------DOF2  <-------GAMYB------>NtERF2                            <---------ANAC58 --------->MYB52(2)      <---------O2                            <---------ANAC58<-------TEIL  --------->ANAC46                    <------                       <----------DOF2 ---------->DOF2 --------->ANAC58       --------->ARR14(2) -----YAB1---------->DOF2  ---------->ID1 ------------>MYB.PH3(2)  <---------ALFIN1           <------ ----->ATHB12    <---------DAG2      <---------YAB1   --------->SPL7 --------->O2        <-----------GT1 ----------CBF   <----------DOF2 <-----------TBP  --------------->AtSPL8      <---------ARR14(2)  <--   cattggagccattaaagccctttttctttggctttttttataaaagttcgttacagtaccccaccatcaccacgtagccaaatactctatattacacttt  8329600                                                 <---------ARR14(2)                                                 --------->ARR14(2)                                                 --------->ARR11(3)         <---------ANAC55(2)                                                 <---------ARR11(3)         <---------ANAC46                                             <-----------GT1                <---------ANAC58                    <---------AHL20(2)--------->TOE2(3)                     <---------ANAC58      <-----------GT1                --------->YAB1                    --------->ATHB12      --------   <----------DOF2 <---------AHL20(2)<--------HAHB4------>ZmHOX2a(2) <---------WOX13(1)      <------- ---DAG2 <---------DAG2             <---------YAB1<------ZmHOX2a(2)--------->ATHB12         --------- ----DOF2<----------DOF2 <-----------GT1 --------->AHL20(2)       <---------YAB1            --------- ---------GT1 <----------DOF2-------->P<---------YAB1           <---------At4g35610--------->AHL20(2)   tagcccttttacttttctttttttatttatctacccttatcattaatatacgatcttcacatgtttagatgattgattacttgaatttaacaaaaaatct  8329700       <---------AHL20(2)               <-----------GT1       --------->AHL20(2)              <---------YAB1      <---------AHL20(1)             <---------AHL20(2)      --------->AHL20(2)             <---------ICU4                                          --------      <---------AHL20(2)            --------->AHL20(2)                                    --------->MYB52(1)      --------->AHL20(1)         --------->AHL20(2)                                      <---------ATHB51     --------->AHL20(2) <---------RVE1(1)                                          --------->ANAC58  --------->ICU4        <---------CCA1(1)                                          --------->ANAC58 --------->AHL20(2)    --------->ARR11(3)                      --------->AtLEC2  --------->AtMYB61 ->ARR11(3)            <---------ARR11(3)  --------------->AGL15         ----------->GT1 <---------ATHB12 --ARR11(3)            <---------AHL20(1)  <---------------AGL15    --------->YAB1 --------->ANAC46 >CCA1(1)              --------->AHL20(1)  ========================================================== >RVE1(1)          ---------->DOF2  <---------AHL20(2)         ----------->GT1   ----------->RAV1(1)-   cataaaaattaatttagtatctaaagatatttggattatttattactaaatataaaaaactagacatgtaaaataatgtgaaaccacacaaataatggaa  8329800                                                                                             ------>ZmHOX2a(2)                                                                                            ---------                                                                                            <------ZmHOX2a(2)                                                                                           --------->ARR11(3)                                                                                           <---------                                                                                           <---------ARR11(3)                                                                                           <---------ARR14(2)                                                                                           --------->ARR14(2)                                                                                           <---------AGP1                                                                                          <---------CCA1(2)    <---------MYB52(1)  <---------ARR14(2)                                                --------->At4g35610  --------->ANAC55(2)   --------->ARR14(2)                                       --------->At4g35610  --------->TOE2(3) ----------------->AGL3          <---------YAB1               <---------At4g35610  <---------ANAC55(2)--------------->AGL15       --------->AHL20(1)       =========================HOX2a_HOX2a --->GT1            ----------------->AG         <---------AHL20(1)       ------>ZmHOX2a(1)--------->AGP1 =====================================MADS_MADS  <---------AHL20(2)       ==========================HOX2a_HOX2a -------->MYB52(1)<-----------GT1      --------->MYB46(3)          --------->AHL20(2) ------->TEIL   aataccgtaatgtcgatctattaccatatatgttttcatcaacaaatctaatatatgattcagaaaccatttattcctcattcagatgaatcagatctca  8329900                                      <---------AHL20(2)                                   <---------AHL20(2)                                   --------->AHL20(2)            <---------ARR11(3)                                   --------->ATHB51             <---------CCA1(2)     -------->P                   --------->ICU4               --------->ARR11(3)    ------->GAMYB<---------AHL20(2)<---------ICU4              <---------ARR11(3)   <---------MYB55(2)           --------->YAB1                 --------->AHL20(1)   --------->MYB46(3)        ----------->GT1                   <---------AHL20(1)   <---------MYB111(2)    <---------AGP1 <-----------GT1  <------ZmHOX2a(1) >GLK1(1)        --------->AHL20(2)<--------ATHB1    <----------DOF2   ------>ZmHOX2a(1) --ARR10        --------->AHL20(2)<---------ATHB51<-----------GT1--------->ARR11(3)--------->REM1(1)   cttcaacaaccatttctatttatttctagttctgtaataatttatacatgtttaactttaggaaatatatctcctctcactcactacaactacatgtact  8330000  Previous    Next  AGI:  At5g24390.1    Description:  RabGAP/TBC domain-containing protein. similar to RAB GTPase activator [Arabidopsis thaliana] (TAIR:AT3G49350.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48599.1); contains InterPro domain RabGAP/TBC; (InterPro:IPR000195) Range:  from: 8326610    to: 8329493    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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