Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100     --------->ATHB12 <---------ARR11(1) ------->TEIL --------->GLK1(2)                  <---------At4g35610 <---------ARR14(2)                 <---------ZAT2 --------->ARR14(2)             ------>NtERF2 ---------ARR14(1)        <---------MYB52(1) ---------CCA1(2)      <-------TEIL --------->At4g35610 ----ZAT2            <---------ARR14(2) --->At4g35610       --------->ARR14(2)                                                            <- ----At4g35610      <---------HSFB2a(1)                                --------->ANAC58       ------- --->ZAT2           <------ZmHOX2a(1)                  --------->ZAT14 --------->ANAC58 ---------->DOF2   tcgaatctttggagcatttggaggattcgtttgccgagagctcagactttgaaacactgaagaatacagtctcaagcctaagaggcacttcaaaggaagt  8310700             <---------At4g35610            --------->MYB52(2)          <---------MYB52(1)                     <<<<<<<<<<<<<<<<<LFY     ------>ZmHOX2a(2)                          ----------->HVH21    <------ZmHOX2a(2)                       --------->ATHB12   <---------ARR14(2)                    <---------At4g35610   --------->ARR14(2)                    --------->At4g35610                           --------->DAG2   <---------ARR11(3)                  <-----------RAV1(2)                     <-----------HVH21   --------->ARR11(3)                 <---------At4g35610                  --------->MYB52(1)       - ----------GT1<---------GLK1(2)       --------->At4g35610          <-----------RAV1(1)---------->DOF2 ---->GT1 --------->DOF5.7(2)      ---------->DOF2           <----------DOF2  ----------->GT1  ------   tatacgatctgcgttagcttctctctctaattgtacaaacagcagatgatttgacaatggaggctttttctgtggcgaaacggtcacaaaaagggagtag  8310800                                       >>>>>>>>>GT-1                                    <---------MYB46(3)                                    ----------->GT1                                 <---------ANAC55(1)                                 <---------ANAC55(2)                                 <---------ANAC46                                 <---------ANAC58                                          --------->ANAC58              <---------ARR14(2) <---------ANAC58                      --------->ANAC58    --------->ANAC58         ----------->GT1         --------->ANAC55(2)       <---------MYB52(1)         ---------------        ----------->GT1     <----------DOF2               --------->TOE2(3)           <--------------    <------ZmHOX2a(1)    <---------ANAC58               <---------TOE1(3)             <---------TOE2(3) -------->TOE1(2)        <---------ANAC58<---------YAB1 <---------TOE2(3)             --------------- ----->GT1--------->At5g28300  <-----------GT1         <-----------GT1 --------->ANAC58 <---------SPL7   tacataggagagggtaaatctgtttatgcgtttttacgtggttaatatagttttttttaacgttattttcgacaagaaaactgtttttgaggtaccccat  8310900                  <---------AHL20(2)                  --------->AHL20(1)                  --------->AHL20(2)                 <---------AHL20(2)                 --------->AHL20(2)                                                              ----             <---------AHL20(2)                                                                  <---    <-----------HVH21  <---------AHL20(2)                                       --------->ARR14(2) --------->At4g35610   --------->AHL20(2)                                       <---------ARR14(2) <---------At4g35610  --------->AHL20(2)                                   <-----------RAV1(1)  <---- >AtSPL8     --------->AHL20(2)            ---------->DOF2       <---------TOE1(3)          <-------- -AtSPL8     --------->AHL20(1)        ---------->DOF2          <-----------RAV1(2)      <----------DOF2 >AtSPL3    --------->AHL20(2) --------->MYB46(3)               =======================RAV  <--------   ataagctgtcacaaaaaaattaaattaaaatcaacaaatgccaaagaaagactgaattgcatttgctcaggttttatatgtggtttcgctactttggtgt  8311000                                                                       <---------ICU4                                                                       -------->ATHB1                                                                       <------------ATHB5                                           --------->CCA1(2)           --------->ATHB12                                    <------------CBF                   --------->YAB1                                  <---------ARR11(3)                  <---------ATHB12       <------------------------ANAC81  <---------TOE2(3)           --------->WOX13(1) ------->GT1                      --------->ARR11(3)         <---------ICU4 ------ETT(2)                     <---------ARR14(2)         --------->YAB1                        -- --NtERF2                         --------->ARR14(2)        <---------ATHB12                       <- -ANAC58                         <------ZmHOX2a(1)     *TSS --------->ICU4                --------->CCA1(2) -ANAC58                      --------->YAB1   <---------------------WRI1              <---------YAB1   cgataaatgtaattttgttttgttgaattccatcaggatattgagatttgaagaagcatacaatgatgaacaatcattcgcactagttgatgatatgact  8311100                                                    --------->AHL20(2)                                                    <---------AHL20(2)                                                 --------->ARR11(3)                                       <---------ZAT18                                       --------->ZAT14     --------->ARR11(3)                                       <---------ZAT14     <---------ARR11(3)                                   --------->ZAT6<---------AHL20(1)                            <-----                                 <-----------GT1 <---------ARR11(3)                  <---------ARR11(3)        <----------DOF2       <----------DOF2    --------->AHL20(1)                  --------->ARR11(3) ------->ZAT14             --------->ICU4 --------->ANAC46<---------CCA1(2)         <---------CCA1(2) --------REM1(2)      --------->YAB1 --------->ANAC46 --------->AHL20(2)        --------->AHL20(2)<--   ctacaggctcctttcttaggccaagggtaatgcttttacacttcactcaaatatttttatatatctgtctctgtgtttgtgtttatatatcttcaataaa  8311200                                                   <---------YAB1                              <-----                                           --------->LBD16                              <---------ZAT18                                          ------->GAMYB                              <---------MYB46(3)   <----------DOF2                       <---------LBD16                        <---------TOE1(3) ------GT1       <---------YAB1   --------->At4g35610      <---------MYB46(3)   <---------TOE2(3) --------DOF2  --------->YAB1 <---------REM1(1) --------->MYB46(3)             <-----------RAV1(2)   cttttcttttgatgaaattagaattgtgggagaagtagcttcaaccggaaaccatcaatggctgttctcagacacattgtttcaggtttgttcacttctt  8311300                                            --------------->AGL15                                            <---------------AGL15                            --------       <---------MYB46(3)                 ---------->ID1                         >>>>>>>>>TBF1<------ <---------ANAC58                      ------->TEIL                       <---------ICU4   --------->ARR11(3) <---------ANAC58              <----------DOF2 <---------YAB1            <---------YAB1    <---------ARR11(3) -----DOF2                   --------->At4g35610--------->YAB1           --------->ICU4---------->DOF2   ttttcttggtgtttgatatttctcatctatgagctataatgtatgtcccattatagtgactgcatagaacatttcatgatgaagaagaataaagatttaa  8311400                                                                         <---------AHL20(2)          --------->ATHB12                                              <---------YAB1   <---------ANAC58                                                    <---------AHL20(2)   <---------ANAC46                                            <---------TOE1(3)    ---------->ARF1   <---------ANAC58 <---------AtLEC2                           <---------TOE2(3)<---------ANAC58<---- ->AHL20(2)>>>>>>>>>ARR2                       <---------GLK1(2)     <---------YAB1 ---------->ID1<-- ---AHL20(2)<---------WOX13(1)            --------->GLK1(2)<----------DOF2      <---------ANAC58<----   tatttgtgtgtttgattgttttgcattgtgaacatgagtttcagaatcagtttctctctggcttcaaggttatttttatttgtcttgtctccaagtttaa  8311500                                                                                      <-------GAMYB                                                                                     <---------ANAC46                                                                                     <---------DEAR3(1)                                                                                    <------NtERF2                                                                             <------ZmHOX2a(2)                                                                            --------->ARR14(2)                                                                            --------->ARR11(3)                                       <---------ZAT14                      <---------ARR14(2)      <                                       --------->ZAT14                     ==========================                                     --------->At4g35610                   <------ZmHOX2a(1)        <                                     <---------At4g35610        --------->YAB1    <---------DEAR3(1)-       <-----------GT1     <---------YAB1                       <---------ICU4=======================      --------->GLK1(1) --------->GLK1(2)                       -------->ATHB1------>ZmHOX2a(2)    <- <-------TEIL          --------->ARR14(2)                      --------->ICU4======================== -----TOE1(3)          <---------GLK1(2)                       <---------ATHB12  <---------At4g35610< ----ZmHOX2a(1)        <---------ARR14(2)                    --------->WOX13(1)  --------->At4g35610- -----TOE2(3)       --------->YAB1<---------ZAT18         --------->YAB1   ==========================   ggattcatatatccattttgaatcagattcttatagggcagtttacttatacacagactatcgcaatcattccactaggatccagcggcgttgttcaact  8311600  Previous    Next  AGI:  At5g24350.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO48609.1); similar to hypothetical protein [Brachypodium sylvaticum] (GB:CAJ26383.1); similar to hypothetical protein OsI_036631 [Oryza sativa (indica cultivar-group)] (GB:EAY82672.1); contains InterPro domain WD40 repeat-like (InterPro:IPR011046) Range:  from: 8301108    to: 8310898    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g24352.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G64625.2); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABA96530.2); similar to hypothetical protein OsI_036304 [Oryza sativa (indica cultivar-group)] (GB:EAY82345.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70692.1); contains domain PTHR13902:SF5 (PTHR13902:SF5); contains domain PTHR13902 (PTHR13902) Range:  from: 8311055    to: 8311988    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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