Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                        ===============                                                                                      ---------->DOF2                                                         ---------->DOF2        ------>ZmHOX2a(1)                               --------->ANAC58      --------->ARR11(3)     <---------ARR14(2)                            ============================HOX2a_HOX2a         --------->ARR14(2)    <--                            <------ZmHOX2a(2)        <---------ARR11(3)    <---------GLK1(1)    <----               <---------ATHB12--------->ANAC58  ------>ZmHOX2a(1)         --------->GLK1(1)    <---- -------->ARR14(2)         --------->ARR11(3)   --------->TOE2(3)          <---------CCA1(2)    ----- ---------GLK1(2)---------->DOF2             <---------ARR14(2)       --------->YAB1--------->YAB1=== ---------ARR14(2)        --------->GLK1(1)  --------->GLK1(2)     --------->YAB1  <---------ATHB12   caaattcgcaaaatcaaatcaaagacagagatcaagaaacccagaagaatcctaaaatctaaagctcaacaataaacatatcctaatcaaaagaaggaag  8296700                         <---------ZAT6                       ----------->GT1               --------->ATHB12                     <---------ZAT14                <---------YAB1              ==========================bZIP_DOF------>ZmHOX2a(2)              <---------TGA1a                  --------->At4g35610 =======================bZIP_DOF               <---------At4g35610 --------DOF2 --------->O2                     <------ZmHOX2a(2)                       --------->HSFB2a(2) -----HSFB2a(1) --------->ALFIN1              --------->ARR14(2)                    <----------DOF2 -----HSFC1(2)<---------O2    --------->DAG2  <---------ARR14(2)                   <----------DOF2 ---->HSFC1(2)--------->TGA1a---------->DOF2  <---------ARR11(3)         --------->ARR14(2)--------->At4g35610 =======================bZIP_DOF              --------->ARR11(3)         <---------ARR14(2)<---------At4g35610   ctttgaaattagagtcatgtgggtatagtgaaaaagcttacatttagggatctgatgtttggaacaagaagggcagaaccaagagcctttgggaactgaa  8296800                                                                               --------->ARR14(2)                                                                            --------->HSFB2a(2)                                                                     <---------MYB46(3)                                                                    <--------P <---------ARR14(2)                                                          --------->ZAT2    <---------HSFB2a(2)                                                          --------->At4g35610--------->LBD16     ------>ZmHOX2a(2)          <---------DAG2--------->ETT(1)    <---------MYB46(3)   --------->GLK1(2)            <----------DOF2  ---------->DOF2<---------ANAC58   --------->ARR14(2)      <-----------GT1   ---------->ID1 <----------DOF2<---------LBD16   <---------ARR14(2)--------->ICU4        <-----------RAV1(1)  <---------ANAC58  <------ZmHOX2a(1)---------->DOF2  ---------->ID1  ---------->DOF2<-------GAMYB--------->GLK1(1)   <   acgaggatcggtctgagacagaaaagatgaaaccctttatcgcatttgtcgcaaagaagcagctttgctggttgtttaccggaactgcattcttcgcaga  8296900                                                     ------>ZmHOX2a(2)                                                     ================================HOX2a_HOX2a                                                    <------ZmHOX2a(2)                                                    =================================HOX2a_HOX2a                                                   --------->ARR14(2)                                                   <-----------ARR10                                                   <---------ARR14(2)                                                   <---------AGP1                                            --------->MYB55(2)                                           <---------DEAR3(1)                                           --------->ALFIN1                                           <---------AtMYB61                            <---------ETT(1)<---------DEAR3(2)                            ----------->HVH21<---------SPL7                     <---------ICU4     <---------ANAC58                     --------->YAB1     <---------DEAR3(1)            --------->ARR14(2)          <---------ANAC58            <---------GLK1(2)      <-----------RAV1(1)                                      ------>NtERF2            <---------ARR14(2)     --------->ALFIN1--------->AGP1                          --------->RAP2.6(2)         --------->YAB1<---------YAB1   <---------ANAC46                                  --------->MYB46(3)  <-----------------AGL1   ------>ZmHOX2a(2)<---------MYB46(3)                          --------->ANAC46 ------->TEIL  --------->YAB1     <-------MYC3     --------->ARR11(3)                <---------ALFIN1 --------->ARR14(2) <---------ATHB12   <---------LBD16       ----------->HVH21      ----------->HVH21 ---------CCA1(2)   --------->ICU4------->MYC3    <---------CCA1(2)           ------>ZmHOX2a(1)  <---   ctgtatcccaatcggaatcggaatcatgatccgacatgtgttgcggtggttcggatctagggtttgacgcttgtgttctccttcgcctcacagccaccat  8297000                                                                                                    <                                                                                                    -                                                        ------>ZmHOX2a(2)                           <                                                       --------->CCA1(2)                            <                                                       <------ZmHOX2a(2)                          ---                      ---------->DOF2                 --------->ARR11(3)                        <----              <-----------GT1                         --------->AGP1   *TSS                   <------          --------->ATHB12                            <---------ARR11(3)                   <---------ARR14(2) ------ICU4 <---------WOX13(1)              <---------YAB1           <---------ANAC46      --------->ARR14(2)   tcttacacttattgatttaccagagaaagagagagagtgagagattataaatgtgagatctagccgaggttgagtagaagagttcgcgctctggattcac  8297100                --------->AHL20(2)        --------->LBD16        <---------LBD16       <---------ANAC46       --------->LBD16       <---------LBD16      <---------LBD16     <---------LBD16        <---------ALFIN1 <---------GLK1(1)         <------NtERF2 --------->GLK1(1)         --------->ATERF1(1) --------->HSFB2a(1)      ------>NtERF2 <----------TaMYB80       <---------RAP2.3(1) ---------GLK1(2)        --------->PCF2       <---------ARR14(2) -------->ARR14(2)       <<<<<<<<<<E2Fa       --------->ARR14(2)                                 ==== ---------ARR14(2)       --------->ANAC46     <---------GLK1(2)                   <---------GLK1(2) -----------ARR10<---------AHL20(2) <---------TOE2(3)                          <------------MYB.PH3(1) ------>LBD16   <---------AHL20(2)  <---------TOE1(3)                        --------->MYB52(1)  <--- -----LBD16    --------->YAB1      <---------At5g28300   ----------->GT1   <---------MYB59      <---- -----GT1--------->LBD16---------->ID1      --------->LBD16              <-----------GT1     --------   cggattttcccggggaattttaatttggcgccactgttacggtttcccgatttgcagactggtttattttggttttatctaaccgattttgagaaattag  8297200                                 <------MYB83                            <------MYB46(1)                            <------MYB83                     <-------GAMYB                     <---------ANAC58                    <---------MYB46(3)                   <---------TOE2(3)------------>CBF                   <---------YAB1<---------DEAR3(2)             <---------AHL20(1)  <------MYB46(1)      <---------DEAR3(2)    <---------DEAR3(2)     ------>ZmHOX2a(2)     --------->MYB59                           --------->DREB2C(2) ===========HOX2a_HOX2a<---------MYB46(3)              --------->LBD16 ---ZmHOX2a(1)<---------AHL20(2)--------->MYB59     --------->MYB52(1)----------->RAV1(1)    ------->TEIL -----YAB1  <---------CCA1(2) <---------MYB52(1)   <---------ALFIN1 --------->DEAR3(2)------------>CBF ->ICU4  <-------TEIL<---------ANAC58     <---------YAB1       --------->AtMYB61     ------>ZmHOX2a(1)   gattagatcggttcatatattttggttgttcggttcggttcaatttgattatcccaccggacaaaccaaaaccgacataagactctccttcaatgtaact  8297300                                               ------>ZmHOX2a(2)                                              <------ZmHOX2a(2)    ------>MYB83<---------ZAT18                                             --------->ARR11(3)    ------>MYB46(1)                                             --------->AGP1      --------->DEAR3(1)     ----------->HVH21                                             <---------ARR11(3)  ------->GAMYB --------->ZAT18                                             <---------AGP1      --------->DREB2C(2)  <--------------                                         ---------->DOF2         --------->DEAR4(1)   <---------At4g35610                                       >>>>>>>>>RAP2.2           --------->MYB46(3)   --------->At4g35610                   <----------DOF2   ------>MYB46(1)            --------->DEAR3(2)    ----------->RAV1(2)        *TSS  <-----------GT1        ------>MYB83            --------->MYB46(3)<---------ZAT14      <------------CBF              --------->WOX13(1)   <-------TEIL          --------->ZAT14    <--   ttcaactaaattgattttgctctttgaacgatggagaccaatctaaagatctatctagtttcatccaccgactcgtccgagttcactcacctgaaatggt  8297400                                                 --------->ANAC58                                                 --------->ANAC58                                                 --------->ANAC46                                               <---------ALFIN1                                              <---------ZAT14                                              --------->ZAT14        <---------ETT(1)                                       --------->ANAC58           <---------ARR14(2)                             ------>NtERF2--------->RAP2.6(2)     --------->ARR14(2)                            --------->ANAC46--------->bZIP60(2) <---------DEAR3(2)      --------->ANAC46                --------->YAB1         --------->ANAC58       <------NtERF2<---------MYB52(1) ---AGL1        <---------ICU4<------NtERF2 --------->ANAC46<---------DEAR3(1)      ------>ZmHOX2a(1) --------DOF2  <------ZmHOX2a(2)       --------->ANAC46  --------->ANAC46 <-----------HVH21        --   ctttcactcgttctacgatcatcgccttagacgccgaatggaagccacaacactccaatacgtcgtcgtttccgaccgtcactctcctccaagtcgcatg  8297500              --------->ANAC58              --------->ANAC58             <---------LBD16           ----------->HVH21         <---------TGA1a         --------->TGA1a         <---------O2                                                                               -         --------->ANAC58                                                                           <         --------->O2                                                                               <         <---------bZIP60(1)                                                                       <-         --------->bZIP60(2)                                                                      ---         --------->ANAC55(1)                                                                 <-------         --------->ANAC55(2)                                                         --------->YAB1--         <---------ANAC55(2)            --------->ATHB12                           <---------WOX13(1)         --------->ANAC58             <---------WOX13(1)                   <---------At4g35610    <--         --------->ANAC46           --------->ATHB12                       <---------ZAT2    <-------         --------->bZIP60(1)       ------>ZmHOX2a(1)                       --------->At4g35610  <----     <-----------HVH21             <---------YAB1        <---------At4g35610 <---------MYB46(3)<----- ---->NtERF2 ------>NtERF2        --------->TOE2(3)   <-------TEIL  <---------MYB52(1)      <-------TEIL   ccgactcagtcacgccacggatgtctccgatgtcttcctcattgatttgagttcgattcatcttccatcggtttgggagctgttgaatgatatgttcgtg  8297600  Previous    Next  AGI:  At5g24330.1    Description:  ATXR6 (Arabidopsis thaliana Trithorax- related protein 6); DNA binding. Identical to Histone-lysine N-methyltransferase ATXR6 (ATXR6) [Arabidopsis Thaliana] (GB:Q9FNE9); similar to ATXR5 (SETDOMAIN GROUP 15) [Arabidopsis thaliana] (TAIR:AT5G09790.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO48621.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, PHD-type; (InterPro:IPR001965); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011); contains InterPro domain SET; (InterPro:IPR001214) Range:  from: 8295150    to: 8297071    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g24340.1    Description:  3'-5' exonuclease domain-containing protein. similar to 3'-5' exonuclease domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G56310.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48620.1); contains InterPro domain Protein of unknown function DUF82 (InterPro:IPR002782); contains InterPro domain Polynucleotidyl transferase, Ribonuclease H fold; (InterPro:IPR012337); contains InterPro domain 3' (InterPro:IPR002562) Range:  from: 8297308    to: 8300377    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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