Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                        ----------->GT1                      --------->MYB111(1)                     --------->ARR14(2)                      <---------MYB46(3)                      <---------ARR14(2)                      --------->MYB111(2)            --------->GLK1(2)                      --------->MYB46(2)             --------->ARR14(2)                   ------------>MYB.PH3(2)  --------->At4g35610                   <---------STY1(2)     =======================HOX2a_HOX2a         --------->At4g35610                   <------MYB46(1)       ================================HOX2a_HOX2a--------->ZAT2      --------->ANAC55(2)                <------ZmHOX2a(2)   <---------MYB52(1)     <---------ZAT2      <---------ANAC55(2)               <-----------HVH21------>ZmHOX2a(1)        <-----------RAV1(2)  <-----------HVH21<------MYB83--------------->AtSPL8<---------ARR14(2) --------------->AGL15 --------ICU4     --------->MYB59       <---------ARR14(2)  --------->LBD16       =================== ------->YAB1>>>>>>>ZML2 <-----------GT1--------->ARR14(2)<---------LBD16    ---------->DOF2      --- -------ATHB51 --------->STY1(2)   ------->TEIL ----------->ARR10 ------>ZmHOX2a(1) <---------At4g35610 -------ATHB12 <---------STY1(2)  <-----------GT1   <---------GLK1(2)   =============================   ataatgtcacttgttctagctaggtagttactatatgtacccgatcagcgaagagattcctccggttcctatttctgaataaagccagctgaaattcttc  8239800                                                     <-----------------AGL3                                                     <---------ETT(2)                                                     --------->ETT(2)                                                     <-----------------AGL2                                              <---------WOX13(1)                                            ------>MYB46(1)                                            ------>MYB83    --------->TOE2(3)                     <---------MYB59   --------->REM1(1)                      --------->TOE2(3) ----------->RAV1(1)                      <---------MYB46(2)            <---------ZAT6 --------->TOE2(3) ============RAV                         --------->ANAC55(2)      <----------DOF2      <---------DAG2 --->ZmHOX2a(1)                          <---------ANAC55(2)   ------->TEIL ---------->DOF2<---------YAB1 ======================================================================MADS_MADS       --------->TOE1(3)   ctgcaacatcaaacttttaaactctaattaagctatatagattacctaattgctgtctacatatggaccttttagagtgaaagaagaaaccttatgaata  8239900                                                                                                   <-                                                                                                  ---                                                                                                  <--                                                                                                  <--                                                                                                  ---                    --------->At4g35610                                                   --------->ANAC58                 --------->At4g35610                                                      -----------                 <---------ZAT2                                  <---------ANAC58         --------->ANAC46          <---------YAB1                     ---------->DOF2     <---------ANAC58  <---------------AGL15          <---------ATHB51    --------->HSFB2a(2)    <---------ALFIN1 <---------YAB1      --------->ANAC58   <---------YAB1<---------At4g35610      --------->AtLEC2     <---------At5g28300 --------------->AGL15   agaccatcatcgataattgagctgcttagcttcttgaacagttcatacaaagcctccacttcttctaccgtgactattgtccctcccattacaagtaaaa  8240000                                                                                                 <---                                                                                               ------                                                                                              -------                                                                                              -------                                                                                              -------                                                                                             <-------                                                                                            <--------              <-----------GT1                                                               <--------         --------->DAG2                                                                     --------- --------AHL20(2)    --------->ZAT6                                                         <-------- ------>AHL20(2)   ------>MYB83                ---------->DOF2                              <-------- -------AHL20(2)   ------>MYB46(1)            --------->AHL20(2)    --------->ARR11(3)      <-------- -------AHL20(1) <---------MYB59     ----------->GT1          --------->YAB1                --------- ------>AHL20(1) <---------MYB46(2)  --------->YAB1<---------GLK1(2)<---------ARR11(3)      <-------- >GT1   ---------->DOF2   --------->REM1(1)   <---------AHL20(2)  <---------TOE2(3)<---------MYB52(2)   taaaatttgaaaaagtttaccaaactctacaacatgctattgtaacatttaaagattgtcttactaataagattttaaactaaaaactaacatggcgtga  8240100                                --------->ABI4(2)                                <---------MYB46(3)                               --------->ALFIN1                               <---------AtMYB61                              <---------MYB52(1)                             --------->LBD16 ------ANAC46               --------->LBD16 --->MYB52(1)           --------->ARR14(2) ---->HVH21             <---------ARR14(2) ---->TGA1          ------>ZmHOX2a(1) -->ALFIN1        ------>ZmHOX2a(2) ----HVH21       <------ZmHOX2a(2) -bZIP60(2)     <---------ARR14(3) -ANAC46        <---------ARR11(3) >ANAC55(2)     <---------ARR14(2) -ANAC58        --------->ARR14(3)                                      --------->DEAR3(1) -ANAC58 --------->ZAT2<---------CCA1(2)                 <<<<<<<<<TBF1--------->ZAT14 <---------ALFIN1 -ANAC55(2)     --------->ARR14(2)                    <<<<<<<<<TBF1   <---------At4g35610 >bZIP60(1)     --------->ARR11(3)                 <<<<<<<<<TBF1      --------->At4g35610 -bZIP60(1) <---------LBD16<---------LBD16      <<<<<<<<<TBF1         --------->ZAT2<---------ALFIN1   cggatgcaagaagctcgggatcctcatatcccggtggtcgcattgcattcttcttcttcttcttcgatacagagcagcccatacaaacacacccttctct  8240200                                      --------->ANAC46                                      --------->ANAC58                                      --------->ANAC58                                    ------>MYB83                                   <--------ATHB1                                    ------>MYB46(1)                                <---------AHL20(2)                                    --------->MYB52(1)                             <---------ICU4                              --------->REM1(1)                                    --------->AHL20(2)                         --------->ANAC46                                      ------>ZmHOX2a(1)                         --------->ANAC58     --------->GLK1(2)               <---------MYB59  <-----                         --------->ANAC58     --------->ARR11(3)       <------------CBF       -------                 <----------DOF2   --------->MYB55(1)                <---------AHL20(2)   <---------YAB1                <---------ANAC58  --------->AtMYB61              <---------RVE1(1) --------->ATHB51            <----------DOF2   --------->MYB46(3)                 <---------CCA1(1)--------->ICU4   <---------YAB1<---------DAG2   ------->GAMYB                 --------->ARR11(3)<---------ATHB51 ----------->GT1<---------ANAC58 --------->MYB46(3)             <---------ARR11(3)<---------ATHB12   caactgttattagcctttgcttttctcacgctacaaccaaacgcaaataatcttggttaatttacagatatttcattgttcctaataatttgatgatttt  8240300                                                                                                 ----                                                                                                 ----                                                                                                <----                                                                    --------->MYB46(3)        -------                                                                  <<<<<<<ZML2  <---------YAB1--------                                                               <---------HSFB2a(2)      --------->ZAT18                                                               ==========================HOX2a_HOX2a                                                               --------->HSFB2a(2)      <---------ZAT14                                                   <---------------AGL15     --------->YAB1  <-------                                                   --------------->AGL15    <---------ATHB12<--------                                                  <-----------------AGL3  --------->WOX13(1)---------                                    <---------TOE1(2)          <---------HSFC1(1)       ------------>CBF                          <-------TEIL            <-----------------AGL2------------>CBF<---------ZAT18 ----AHL20(2)        ------>ZmHOX2a(1)    <-----------GT1      --------->HSFC1(1) <------ZmHOX2a(2) -->AHL20(2)     --------->ARR14(2) <---------TOE2(2)          ------>ZmHOX2a(1) --------->ARR11(3)   ataaaacacccttcgactgaatcctacattcgttttcgctggttttacttctactaaaaatggtcctagaacaaaccaattaagatcgagtgcaattaat  8240400 --------->ANAC58               <----------DOF2 --------->ANAC46            <-----------GT1 --------->ANAC58         <------------CBF ----->YAB1           --------->ANAC55(2) ---->HAHB4           --------->ANAC58 -----YAB1            <---------ANAC55(2) -->YAB1              --------->O2 ->AHL20(2)           --------->ANAC58 --AHL20(2)         <-----------GT1 -ATHB12          <-----------HVH21     <---------ZAT6            ---------->DOF2 >ICU4   ----------------------->TaNAC69(2)           --------->WRKY18(1) --------->YAB1    ---------   aataggcaacttgtttagtttgtcacgttattgacttttctagtgttttttttgtggtcaaactcaaacaaagtaaacatattttggcaaactcacgaga  8240500                                                                                ------->TEIL                                                                                <-------TEIL                                            <-------TEIL                    --------------->AtSPL8                                   <---------ANAC55(2)                      <---------------AtSPL8                                 --------->AHL20(2)                --------->ZAT18                ---                             --------->AHL20(2)          <---------TOE2(3) --------->YAB1         <--                             <---------AHL20(2)       <---------AHL20(2)   <---------ICU4      ------ <---------MYB59            --------->AHL20(2)        <---------YAB1      <---------ATHB12 ------->TEIL >ANAC46             --------->AHL20(2) <-------TEIL --------->TOE2(3)  --------->YAB1    <---------AtLEC2   ttaccaaaatgtttctaatgaaattcaatatttaattacatatacatacatgaaatattaatgtagatgagcactaatcatgtacatctaatgcatgtat  8240600                                                  <---------ANAC46                                                  <---------ANAC58                                                  <---------ANAC58                                           --------->WOX13(1)     --------->ARR14(2)                                     ---------->DOF2              --------->ARR11(3)                                   --------->DOF5.7(2)            --------->GLK1(2) ------>AHL20(2)                  --------->TOE1(3)               <---------ARR11(3) -------AHL20(2) --------->ANAC55(2) <---------DOF5.7(2)          <---------ARR14(2)            ----- ->TEIL       ------->TEIL        --------->TOE2(3)           --------->YAB1                    <----   atatatatcgtctatgtatatgtaacatttgaatttcgttaaaggcaatctagcgtcgaattcatcaaaatctgcaagagtttgacaaacatcgatatta  8240700  Previous    Next  AGI:  At5g24270.1    Description:  SOS3 (SALT OVERLY SENSITIVE 3). Identical to Calcineurin B-like protein 4 (CBL4) [Arabidopsis Thaliana] (GB:O81223); similar to CBL8 (CALCINEURIN B-LIKE PROTEIN 5) [Arabidopsis thaliana] (TAIR:AT1G64480.1); similar to calcineurin B-like protein 4-2 [Populus trichocarpa] (GB:ABO43664.1); contains InterPro domain Calcineurin B protein (InterPro:IPR015757); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Recoverin; (InterPro:IPR001125); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048) Range:  from: 8238784    to: 8240182    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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