Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                            <---------ARR14(2)                                          <---------ARR11(3)                                          --------->ARR14(2)  ================================HOX2a_HOX2a  ------>ZmHOX2a(1)                       --------->ARR11(3) --------->TOE1(3)         <------ZmHOX2a(2)         --------->GLK1(2) --------->TOE2(3)        --------->ARR14(2)        <---------GLK1(2) >ATHB51                  <---------ARR14(2)    --------->LBD16             --------->YAB1 -ICU4<---------ATHB12<---------LBD16    <---------CCA1(2)   --------->TOE2(3)                    <--   aatccttaatcactaaatataagtctcggatcatcaaacgagtatatctccagagaatcgctacataaatctccaaaatcaaaacccgatttcgaatttc  8233800             <---------ATHB12             <------ZmHOX2a(2)          --------->LBD16         --------->HSFB2a(2)         <---------HSFB2a(2)                              --------->DEAR3(1)        <---------LBD16                                  --------->DEAR3(2)                        --     --------->GLK1(1)                        ------>ZmHOX2a(2)                                   --- --------->ANAC46                          --------->ATHB12           ----------->GT1  ---------->DOF2 -------REM1(2)                  --------->YAB1         --------->MYB52(1)   ----------->GT1      <--   tacacacatttcccgatcatcgaaaccgatacaattcatcatccatgatcggaagagacaccggcgagaaaatcgaaaatcgaaaatcgaaaagaagaaa  8233900                                                                              ---------->DOF2                                                                              --------->REM1(2)                                                                             ----------->HVH21                                                                           <---------ANAC58                                                                           <---------ANAC58                                                    --------->YAB1         <---------ANAC46                                              <---------TOE2(3)            <---------ANAC55(2)                                        <---------AHL20(2)              <---------ARR14(2)                                        --------->AHL20(2)              --------->ARR14(2)  <---------ICU4                       <---------AHL20(2)               --------->GLK1(2)         <-- <---------ATHB12                      <---------AHL20(1)     --------->TOE1(1)         --------->GLK1(2) ------->WOX13(1)                      --------->AHL20(1)    <---------LBD16--------->LBD16       --- ------>AHL20(2)              --------->TOE1(2)     ----------->GT1 --------->YAB1      <-----------ARR10 -------AHL20(2)--------->GLK1(1)      --------->AHL20(2)   --------->TOE1(2)<---------MYB52(1)------   ttaatcaattcttcagagaaatcgaaaacaaacctagaaaataaaattaagaaatggtaatacctcggaataaaaatccgtgaagcgaagaatctaatcg  8234000                                                                                               ------                                                                            --------->LBD16  <-------                                                                           --------->HSFB2a(2)-------                                                                           <---------HSFB2a(2)<------                                                                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                                          <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                                          --------->LBD16<xxxxxxxxxxx                                     --------->HSFB2a(2)                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                     <---------HSFB2a(2)         --------->AHL20(1)     <---------ANAC58    <---------ZAT6                   --------->LBD16             <---------AHL20(1)     <---------ANAC58 -------ARR14(2)         --------->ANAC58                        <---------AHL20(2)  <-----------GT1- ------>ARR14(2)         --------->ANAC58--------->ARR14(2)      --------->AHL20(2)  xxxxxxxxxxxxxxxx --->YAB1                --------->ANAC46<---------ARR14(2)     --------->AHL20(2)  <xxxxxxxxxxxxxxxxsmallRNA(i)   gaactggtgttattcgataaaacttactcgccaagtttccgagaattcgaaaacccctctcttcaattttatttcccccagaaaattttagcgttcccag  8234100                                                        <---------DEAR3(1)                                                       --------->At4g35610                                                     <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                     *TSS                                                  xxxxxxxxxxxxxxxx>smallRNA(i)                                                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                            xxxxxxxxxxxxxxxx>smallRNA(i)                                         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)  ----------->GT1                      xxxxxxxxxxxxxxxx>smallRNA(i)           <-----------TBP --->LBD16  --------->DAG2        <xxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)<---------ANAC46 --LBD16   ---------->DOF2      ----------->GT1<----------DOF2--------->ARR14(2)                   -- -->HSFB2a(2)                xxxxxxxxxxxxxxxx>smallRNA(i) <------NtERF2      ------->TEIL         --- ---HSFB2a(2)               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) <---------ANAC46            <xxxxxx xxxxxxxxxxxsmallRNA(i2)   xxxxxxxxxxxxxxxx>smallRNA(i)<---------At4g35610  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) --------->DOF2          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) xxxxxxxxxxxxxxxx>smallRNA(i)<---------WRKY18(1) xxxxxxx>smallRNA(i2) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)   <---------ARR14(2)<---------AHL20(2)---   aagaaagaaaaaaaaaagggagagagagaaacagtggtaactaagtcttctttgaacagcggcgaattttgtggggatgtatttatagagtttgacctcg  8234200                                                                                      --------->ARR14(2)                                                                                      --------->GLK1(2)                                                                                      <---------ARR14(2)                                                                                      <---------ARR11(1)                                                                                      --------->ARR11(3)                                                                                     <---------CCA1(2)                                                                              <---------SPL7                                                                              ------->GAMYB                                                                             --------->MYB46(3)                                                                           --------->MYB52(1)                                                              --------->ARR14(2)     --------->GLK1(1)                                                              <---------ARR14(2) --------->RAP2.6(2)                                --------->ANAC46             --------->At4g35610 --------->ANAC58                              ---------->DOF2                <---------At4g35610 --------->ANAC58                           <----------DOF2                  ----------->ARR10<---------MYB52(2)                          ------>ZmHOX2a(2)             <------MYB46(1)   ----------->HVH21                         <------ZmHOX2a(2)              <------MYB83     --------->LBD16                         <---------RVE1(1)            <--------P        <---------ANAC58                        --------->AGP1--------->ZAT14 --------->ALFIN1  --------->ANAC46       <---------LBD16  --------->ARR11(3)         --------->ANAC58     --------->HSFB2a(2)     ----------->HVH21  <---------ARR11(3)      <---------REM1(2)       <---------ANAC55(2)  <----------DOF2 <------------CBF  --------->At5g28300--------->SPL7   --------->ANAC55(2) ---->NtERF2 ----------->GT1--------->DOF5.7(2)<---------ALFIN1         <---------ANAC58 -------->HVH21 <---------AHL20(2)  --------->LBD16--------->ANAC46  --------->ARR14(2) xxxxxxxxxxxxxxxxsmallRNA(se3)<---------DOF5.7(2)<---------ALFIN1    <---------ARR14(2) ------>WRKY12  --------->AHL20(2) <---------ANAC46--------->ANAC58 <---------MYB52(1)<---------ARR11(3)   ctgacttttgacggaagtttaattgagatctttaacgccgtgaacttctccacacggtagggcagataccgtttccgtaacggacgcaaatcttttatca  8234300                 ------>MYB83                 ------>MYB46(1)            <-----------GT1     --------->HSFB2a(2)                <---------ANAC58     <---------HSFB2a(2)          <---------DAG2  --------->GLK1(2)               <----------DOF2                                --------->AHL20(2)  <---------ARR14(2)        --------->MYB46(3)         <---------AHL20(2)        <---------AHL20(2)  --------->ARR14(2)   --------->ANAC46 <---------ANAC58                        --------->AHL20(2)  ------->TEIL <---------MYB59 <---------ALFIN1       --------->YAB1  ------>ZmHOX2a(2)   gacgaatctagaaattaccaaattcaaacaacaacactttttgctagtgaattctataaaaattgaaattgatcgttttcaaattaatacatttgtcaaa  8234400                                                                                     ---------->DOF2                                                                                 --------------->AGL15                                                                         <---------ARR11(3)                                                      --------->ICU4     --------->ARR14(2)                                              <---------WRKY38(1)        --------->ARR11(3)                                              <---------WRKY12           <---------GLK1(2)              ----------->GT1                --------->WRKY18(1)         <---------ARR14(2)         <---------YAB1               <---------AHL20(2)        --------->AHL20(2)   ================ <----------DOF2<---------ANAC46      --------->AHL20(2)     --------->YAB1   <-----------GT1   tttctttgtttacaattggtgtaaatggaatagttagcaattttttggtcaatggaatatttagcataaaatgcagattttcaccattaaagtcaatgtt  8234500                          --------------------->WRI1                         <---------MYB46(3)                        <------NtERF2                      <---------ANAC46                      <---------ANAC58                      <---------ANAC58                      --------->bZIP60(1)                      <---------bZIP60(1)                      <---------bZIP60(2)                     <------NtERF2                   --------->ALFIN1                       <----------DOF2                  ------->MYC3                         --------->LBD16                  <-------MYC3                        --------->DEAR3(1)                 <---------TGA1a                     <---------LBD16                 =================MYC_MYB           --------->MYB52(1)                 --------->O2                     --------->MYB46(3)                 <---------O2                     <---------ATHB12                 --------->TGA1a                --------->WOX13(1)                 --------->DEAR3(2)                ------>MYB83                  <---------MYB52(1)                   --------->MYB46(3)                ------>MYB46(1)              --------->LBD16                      ------->TEIL               --------->MYB52(1)        --------->ARR14(2)                    --------->ANAC58          --------->WRKY38(1)----------->GT1 <-----------HVH21        <------ZmHOX2a(2)<------ZmHOX2a(2)          --------->WRKY12<-------GAMYB  <---------ARR14(2)   <---------AtMYB61--------->ANAC58 ==========================bZIP_DOF     <---------GLK1(1)<---------ANAC46    --------->CCA1(2)   agacaaatggcgatgaccaacgtggcgtcgttggaaaaatcgaaatccgtcaatcaccggcgttttggtgggatcagtgatacgaaccgatctataaaac  8234600                          <---------AtMYB61                        <----------DOF2                       <---------ANAC58             --------->MYB52(1)                       <---------ANAC58          --------->YAB1                    <--------P                 ------>MYB83                   <---------ANAC58            ------>MYB46(1)        --------->ANAC46              -                   <-------GAMYB      ------>ZmHOX2a(1)               --------->ANAC55(1)           <          <---------AHL20(2)<<<<<<<<<<MYB80  <---------MYB59          --------->ANAC58            <--      ----------->GT1  <---------ANAC46      ------->GAMYB            --------->ANAC58            --- ---------->DOF2   <---------ANAC58   --------->LBD16  ------->GAMYB--------->ZAT6               ----   cgctaaatcggtttaattttgggttgctttggtttgattcctgataaccgaacataaccgaaaaattctaacacgaaataggcagactcatgaagcctca  8234700  Previous    Next  AGI:  At5g24240.1    Description:  phosphatidylinositol 3- and 4-kinase family protein / ubiquitin family protein. similar to phosphatidylinositol 3- and 4-kinase family protein / ubiquitin family protein [Arabidopsis thaliana] (TAIR:AT2G46500.2); similar to phosphatidylinositol 3- and 4-kinase family protein / ubiquitin family protein [Arabidopsis thaliana] (TAIR:AT2G46500.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48656.1); contains InterPro domain Ubiquitin; (InterPro:IPR000626); contains InterPro domain Phosphatidylinositol 3- and 4-kinase, catalytic; (InterPro:IPR000403) Range:  from: 8230945    to: 8234153    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g24250.1    Description:  unknown protein Range:  from: 8233699    to: 8234655    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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