Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                            <---------ARR14(2)                                                                          --------->ARR14(2)                                                                          <---------ARR11(3)                                                                          <---------AGP1                                                                          --------->ARR11(3)                                                                ------>ZmHOX2a(1)   ------->GAMYB                                                                <---------YAB1--------->YAB1                                      <---------AHL20(2)        ==================HOX2a_HOX2a             --------->TOE2(3)        --------->AHL20(2) <---------AHL20(2) ------>ZmHOX2a(2)       --------->YAB1                --------->AHL20(2)  --------->AHL20(2)<------ZmHOX2a(2)      <---------YAB1              ------>MYB83    --------->ANAC58       <---------CCA1(2)     <---------ARR11(3)   --------->YAB1          --------->ANAC58     <--------P  --------->MYB46(3)     --------->ARR11(3)  <---------YAB1           --------->ANAC46 <---------WOX13(1) --->MYB52(1)--------->TOE1(3)    ------>MYB46(1)------->TEIL   ===================HOX2a_HOX2a   cagagaatatcataacattaaactcttatgatcaccaaattaaaatccatgtacgcgattaaaatcctaattggtagatctcataaccatcaaaaacaac  8214300                    --------->ANAC58                    --------->ANAC58                                                 --------->HSFB2a(1)                --------->ANAC58                                                    ------->TEIL    -                --------->ANAC58                                                   <---------ALFIN1 -                --------->AtLEC2                                                  --------->ZAT18   <               --------->WOX13(1)                                                 <---------ZAT18 <--             <---------ATHB12                                                    <---------ANAC58 <--           --------->GLK1(1)                          <---------ATHB12           <---------ANAC58----        ------->GAMYB                   --------->TOE2(3)              ------>ZmHOX2a(2)         ----     ----------->RAV1(1)                --------->TOE1(3)    <-------TEIL       --------------->AtSPL8   taaattccaacagaaatcaagcaaacaatttcaaaactaaaaccctaaattcccaaatcaacatacacactgatcgaaattttgcgcaccttcttcgatt  8214400                                                         <-----------------AGL1                                                        ------>MYB46(1)                                                        ------>MYB83                                                       --------->ORA47(1)                          <-                     --------->ARR14(2)               --------->DEAR4(1)                     --------                     <---------ARR14(2)               <---------MYB46(2)                    ---------               --------->ARR14(2) <---------ARR11(1)  --------->DEAR3(1)                  <---------MYB52(2) -------------->AtSPL3            <---------ARR14(2)  --------->MYB46(3)           <---------ARR14(2) -------------->AtSPL8    --------->ARR14(2)          <---------MYB55(2)           --------->ARR14(2) ---------------AtSPL8    <---------ARR14(2)    --------->YAB1                   --------->LBD16   -- ----MYB46(1)--------->ANAC58     --------->ARR14(2) --------->DEAR3(2)        ------>ZmHOX2a(2) ---- ----MYB83   --------->ANAC46    --------->GLK1(1) <-----------GT1            <------ZmHOX2a(2)  ---- ----->MYB111(1)<------ZmHOX2a(2)<---------CCA1(2)<---------YAB1             <---------ARR14(2)  ---- ----->MYB59 --------->ANAC58 --------->LBD16   <---------ICU4               --------->ARR14(2)------   tggtagtactatcacacgatccaaatccaatccgcgtatccatctatcgattatcaccgacccaaaatcgaaacccttggatcccgatttgaactaaccc  8214500        --------->ANAC46        --------->ANAC58        --------->ANAC58       --------->SPL7    --------->YAB1 --------ATHB12 >P<---------ATHB12 >MYB52(1)                                        --------->At4g35610 ------->MYB46(3)                             --------->GLK1(2) ----->MYB52(1)                          ---------->DOF2                          --------->ANAC58 -->MYB46(1)                        ----------->GT1                               --------->ANAC46 -->MYB83                          ------>ZmHOX2a(2)      --------->CCA1(2)       --------->ANAC58 --->MYB46(3)                   --------->ATHB12--------->YAB1                  <---------ALFIN1   aacgaatcatacgccattgaacatgaaattcaattgatcggagaaaagaatcagaagaagatagacgaacaaaatcgcttctccactcaaattcaaactc  8214600                                          <---------DOF5.7(2)                                         --------->WRKY38(1)                                         --------->WRKY12                                         ----------->HVH21                                        --------->DOF5.7(2)                                 *TSS  ---                                   --------->ARR14(2)                                  --------->DAG2                                   --------->KAN4(2)                               <---------YAB1----                                   <---------ARR14(2)  <---------HSFB2a(2)         <---------ANAC55(2)                                  <---------KAN4(1)    --------->HSFB2a(2)         --------->ANAC58                   ------->TEIL   --------->KAN4(1)   <---------LBD16              --------->ANAC58   gatttgaagaaattagaaatgaattttgaaatttgaatattcgttgacggtttatttgtggaagaagagtttaagttgcgaaattacgaaaggtttagag  8214700                                                       --------->KAN4(2)                                                       <-----------GT1                                                  <---------YAB1        <---------At4g35610                      <---------TOE2(3)                    <---------YAB1        --------->At4g35610                     <-----------GT1    <---------ARR14(2)<---------AHL20(1)        <------NtERF2                         --------->CCA1(2)    ------->TEIL    <---------YAB1        <---------ZAT2                     <---------TOE2(2)       --------->ARR14(2)<---------AHL20(2) ------>DAG2                            --------->ANAC58     <---------MYB52(1)----------->GT1 ------>DOF2    --------->ANAC55(2)     --------->ANAC58    <---------DAG2   --------->SPL7 <--------   aaagcgaggcagctatttatgtgattcttcgaaaccaagagcacgtagatttacgattatccccttatgtatatgctcgaacggtattatttttaaaatt  8214800                                                                       ---------->DOF2                                                                    <---------AHL20(2)                                                                --------->AHL20(2)                                                                <---------AHL20(2)                                                               <---------AHL20(2)                                                            <---------AHL20(2)               <---------GLK1(2)                            --------->AHL20(2)                      <               <---------ARR11(3)                          --------->AHL20(1)                     ---               --------->ARR11(3)                          <---------AHL20(2)                    <---    <---------LBD16  <---------MYB46(3) ---------->DOF2    <---------AHL20(1)               <-------- -YAB1  <----------DOF2    <---------GLK1(2)               --------->AHL20(2)   <-----------GT1 -----   gtgtttcccgctttgaagatttttggttagaatcccataaaaaaaagatggttttgctaaatttatttattttaaaagttattcacatctcttgatgata  8214900                                                                --------->ICU4                          <----------DOF2                     --------->WOX13(1)                      <----------DOF2----------->GT1       --------->ANAC58 <---------AHL20(2)   =========================================MADS_MADS                         ---- ---------YAB1        --------------->AGL15    <---------------AGL15                             ---- ------>YAB1    <----------DOF2      <------MYB83          --------->ANAC58                    ====== ------YAB1  <-----------GT1         <------MYB46(1)      --------->DAG2                       ------ -YAB1 <-------TEIL   <---------------AGL15   <-----------------AG <---------YAB1   ----------->GT1 ---->AHL20(2)---------->ID1     <---------ARR14(2)      ---------->DOF2            <---------REM1(1)   taataaatgttcatttttctttttctttctttgggaatttggtgaataaacaaaattggtaaagcaattacgaatatagctatgtaatgtagaaaacaaa  8215000                                              <------NtERF2                                             <-----------TGA1                                             <-----------HVH21                                            <---------bZIP60(1)                                            --------->TGA2(1)                                            <---------ANAC58       <---------ICU4                       --------->bZIP60(1)       --------->ATHB12                     <---------TGA2(1)      --------->ICU4               --------->O2      <---------YAB1               <---------O2    <---------ICU4                 --------->TGA1a    --------->YAB1                 <---------TGA1a   --------->ICU4              <-----------HVH21   <---------ATHB12            <-----------TGA1                                ---------->DOF2   <---------ATHB51     <-----------HVH21   <---------ANAC46         ----------->HVH21 ----->ANAC58        ========================bZIP_DOF              <---------ANAC58               --- ----->ANAC58        <----------DOF2        <---------ANAC58       <---------ANAC55(2)            --- ============================================bZIP_DOF              <---------ANAC58               --- ---->DOF2        <-----------GT1  <---------ANAC46                --------->ANAC55(2)        -------   agcaaataatgatttgcatttttctttgtcagtcgtcacgtcgatggcgtcatacactgatacaagagtacgtgaccatagaaaagatagaactccatac  8215100                                            --------->YAB1           <---------ANAC55(2)                                            xxxxxxxxxxxxxxxx>smallRNA(i)                                           <---------YAB1            --------->ANAC55(2)           <-                                          <-----------GT1     xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   --            <-----------GT1              --------->YAB1      <------ZmHOX2a(2)                    <--      ----------->GT1                <---------ICU4         <---------ARR14(2)                    ---    ---------->DOF2                  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   --------->ATHB12    ----- ------>ANAC58                      <---------YAB1          --------->ARR14(2)       --------->YAB1-- ------>ANAC58                     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)   <---------AHL20(2)<------- ------>ANAC46                    --------->YAB1  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)<---------YAB1 -->AtLEC2 <---------CCA1(2)   <----------DOF2   <---------YAB1      --------->YAB1<---------WOX13(1)   aaggaagaaagttatatccacttagccatgtttctttcatcatttatcattttcattcagacgatccacttacataattcatttgaatgatgtttctttc  8215200  Previous    Next  AGI:  At5g24206.1    Description:  other RNA Range:  from: 8213629    to: 8214692    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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