Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                  <---------ICU4                                                                --------->ATHB51                                                                --------->ATHB12                                                                -------->ATHB1                                                                -------->HAHB4                                                               <---------ATHB51                                                               --------->ICU4                                                               <---------ATHB12         <---------ZAT6                                      <---------ICU4      <---------HSFB2a(2)                                   ------>ZmHOX2a(1)      --------->HSFB2a(2)                                  <---------MYB59      >>>>>>>ZML2                                       --------->GLK1(2)                        <---   --------->ARR11(3)                          <----------DOF2 <---------YAB1              --------->TOE2(3) -------->DAG2                                --------------->AGL15              ---------->ID1  <--- -------->DOF2                                <---------------AGL15       <---------AHL20(2)------>ZmHOX2a(1) -->ANAC58             ------>ZmHOX2a(1)     ----------------->AGL3 <---------ZAT18        --------->TOE1(3) -->ANAC58      --------->ANAC46  <---------YAB1       <---------GLK1(2)<----------DOF2<---------CCA1(2)   aaaaagttctagagttacacatctcctaactcaattctcattagttttccttttaaagattcctaattattgcgctttaatttgttcttatatccttagg  8186200                                  --------->ANAC58                                  --------->ANAC58            <---------ANAC58                                  --------->AtLEC2            <---------ANAC58                         >>>>>>>>>ARR2                  --------->ARR11(3)                        --------->ATHB12      <---------AHL20(1)            ---------->DOF2   <-----------HVH21         <---------ARR11(3)  <-----------GT1      <---------YAB1         --------->AHL20(1)                  --------->ANAC55(2) ------ANAC58      --------->ARR14(2)         <---------ARR11(3)                  --------->YAB1 ------ANAC58      <---------ARR14(2)         --------->ARR11(3)                 <-------TEIL   cgtttttcaattcttagagccgattttgattgtgtcatgcaaaaacaaaatattgcaatatctatcttgccaaaaaaaaaacatacataatgtgtatagg  8186300                                                                                              <------                                                                                           <---------ALFIN1                                                                                         ------>NtERF2                                                                                        <---------bZIP60(1)                     <---------ARR11(3)                                                 --------->bZIP60(1)                   ----------->ARR10                                                    --------->ANAC58               <---------LBD16                                                          --------->ANAC58          <---------YAB1          ---------->DOF2                                       --------->TGA2(1)        --------->YAB1          --------->ANAC58                                        <---------TGA2(1)        <--------HAHB4          --------->ANAC46                              ---------->DOF2 <------       <---------YAB1--------->ARR11(3)----------->GT1          <---------AHL20(2)      --------->ANAC46     ------>ZmHOX2a(1)   <---------------AtSPL8---------->DOF2 --------->AHL20(2)    ----------->HVH21 <-----------GT1 --------->LBD16--------->ANAC58             <---------ARR14(2)      ----------->TGA1   ttttatcctattattaatacggagattttagtacaagaaagtagttaataaaagtgtgatgcagatttaatatttggacacaaagctatgacgccacttt  8186400                                                                   --------->ZAT2                                                                   <---------ABI4(2)                                                                <---------ZAT2                                                                --------->ZAT2                                                                <---------At4g35610                                           ------>MYB46(1)  <-----------TGA1                                           --------->ZAT2   <-----------HVH21                                           ------>MYB83     <<<<<<<<<<<AtbZIP1                                          --------->ANAC46 <---------bZIP60(1)                                         --------->MYB46(3)--------->TGA1a                                         --------->AtMYB61 --------->TGA2(1)                                      --------->ANAC46     --------->bZIP60(1)                                      --------->REM1(1)    <---------TGA2(1)                                     -------->P            <---------ANAC55(2)                  -----                                     ------>MYB46(1)       <---------TGA1a                      <----                                     ------>MYB83          <---------O2                     <------NtERF2                                     ================================MYC_MYB               ------>NtERF2                                <---------ALFIN1           --------->O2                   --------->DEAR3(1)                               --------->MYB46(3)          ===========================bZIP_DOF  <----                           --------->DEAR3(1)             <-----------STF1               <---------MYB55(2)                 <-------MYC3  <---------MYB55(2)         ----------->STF1              <---------At4g35610                 ------->MYC3 --------->SPL7             <---------TGA2(2)              --------->At4g35610                 <-------MYC2<---------ARR14(2)         ----------->TGA1   <----------DOF2<---------ALFIN1                 ------->MYC2--------->ARR14(2)--------->DEAR3(1)  --------->At4g35610 --------->ANAC46   --------->TOE1(3)      --------------->AtSPL3------>NtERF2--------->TGA2(2)       ------>ZmHOX2a(1)   --------->TOE2(3)     --------->At4g35610   ----------->HVH21--------->At4g35610------>ZmHOX2a(2)- ---DAG2        <----------TaMYB80 <---------MYB111(1)<---------ICU4   --------->DEAR3(1)--------->MYB46(3) ----DOF2      ---------->TaMYB80  --------->AtMYB61  --------->YAB1<---------ALFIN1--------->TOE2(3)   acataccttagcaagagcatatgcgagagccgaaccacctacaccagccccgacgataatgacgtcagcagcaccgtctttttgatcctcagccaccgta  8186500                                                          --------->ANAC58                     ------                                                          --------->ANAC58                     ------                                                       <---------At4g35610                     ------                                                       --------->At4g35610                   --------                                                    --------->TGA2(2)                    <---------ANAC58                                                   <-----------HVH21                     <---------ANAC58                                                   <-----------TGA1                      <---------ANAC46                                                  --------->ANAC58                    <-------MYC3                                                  <---------O2                        ------->MYC3            ------>NtERF2                         --------->O2                        --------->TOE2(2)           --------->DEAR3(1)                     --------->ANAC46                    <-------MYC2         <---------ATERF1(1)      ----------->GT1 --------->TGA1a                     --------->TOE1(2)         <-----------HVH21       --------->DAG2   --------->bZIP60(2)                ================        --------->ANAC46         <---------TOE2(3)--------->ANAC58                   <---------ANAC58     --------->ARR14(2)      <------MYB83         <---------TGA1a                    <---------TGA1a     <---------ARR14(2)      <------MYB46(1)   <---------WRKY12           <-------TEIL------->MYC2 ---->ARR14(2)             =================================MYC_MYB  --------->MYB52(1) <-------TEIL -------HVH21<------NtERF2 <--------P        --------->ORA47(1)    <---------MYB52(2)<---------ANAC58 -----ARR14(2)           <-----------RAV1(1)--------->DEAR3(1)   ------>NtERF2     --------->MYB52(1) -------->At4g35610<<<<<<<<<TBF1 --------->MYB59<---------ALFIN1<----------ID1   --------->MYB46(3)   tcagccaaatccgtcgccttcttcttcatgttggtaaggtagaacaccgtccacgtcagcacgaaggcgactaacgtccataaacaaacgtgcgtaaaag  8186600          ------>MYB46(1)     <-----------GT1                                                               ----------->HVH21 --->ANAC58                                                            <---------HSFB2a(2)<---------- --->ANAC46                                             <---------ANAC46         ----------->GT1 --->ANAC58<---------ARR11(1)                           <---------ANAC58        <------ZmHOX2a(1) -->DOF2  ------>MYB83                                  <---------ANAC58  ---------->DOF2 --------->AHL20(2) ===bZIP_DOF                 <---------YAB1*TSS  --------->AHL20(2)    <---------ANAC46 <-----------TBP   ccatatataaccaaatctatttgttctcaatatgatttatgagtttttaaaaaaaatggcttatgagatagttgtggaaagaggagtgacatatatatag  8186700                                    ------->MYC2                                    <-------MYC2                                    <-------MYC3         --------->ZAT2                  ------->TEIL      ------->MYC3         --------->At4g35610        <-----------HVH21     <-----------GT1            <---------At4g35610    --------->ARR11(3)     <--------HAHB4         <---------GLK1(2)    --------->ARR11(1)     --------->ATHB51       <---------ICU4    <---------ARR11(3)     <---------ICU4      --------->YAB1               ---------->DOF2 -TBP--------->CCA1(2)    --------->ICU4      <---------YAB1<-----------HVH21                      --   ttcaaagatatgtcagtttgaacgtcgcattattaccacatgctcgttatcataatctcggctgtcaaagtttgacataaaagaaacgataagtttatat  8186800                               --------->AHL20(2)                        ------>MYB46(1)                                             --------->ATHB51                      --------->AtMYB61                                             -------->ATHB1                     --------->MYB46(3)                                             --------->ATHB12              <---------ARR11(3)                                                   <---------ATHB51              --------->ARR14(2)                                                   --------->AHL20(2)              <---------ARR14(2)                                    ---------->DOF2--------->ICU4              <---------ARR14(3)                           --------->ANAC58  --------->ANAC58              --------->ARR11(3)                           --------->ANAC58  --------->ANAC58              --------->ARR14(3)                =====================================================            ----------->ARR10  <---------AHL20(2)          --------->ANAC46<---------ALFIN1      --------->MYB52(1)------>MYB83            <---------------AGL15    ------->TEIL    --------->MYB46(3)<---------ALFIN1          --------------->AGL15  --------->ZAT18          <---- ------->At4g35610 <-----------GT1           <-----------GT1     --------->YAB1    <---------AHL20(2)   cagataacaaacagaagatattgaccaccctaattaatgagtttttgttactatatagaacaagcaaacaaaatgcaccactcaaattattgacattttg  8186900                                                                                                 <---                                          --------------->AGL15                                 -----                                   --------->ATHB51                                             -----                                   <---------AHL20(2)                                          <-----                                   <---------ICU4                                              ------        <---------AHL20(2)         <--------ATHB1                                              <-----    <---------YAB1                 --------->AHL20(2)                                          ------    <---------AHL20(2)            <---------ATHB51                                           --------   <---------AHL20(2)             <---------ATHB12 --------->AHL20(2)                   --------->At4g35610   --------->AHL20(2)        --------->TOE2(3)<---------AHL20(2)                        --------->CCA1(2)  --------->YAB1           --------->ARR11(3) --------->AHL20(2)               --------->HSFB2a(2) =========================================================MADS_MADS            <---------HSFB2a(2) -------GT1                <---------ARR11(3) --------->YAB1             <---------ARR11(3)<-------TEIL   actattttaattcatttaagagtttcaaaaatctcaataatttgctaattatataaaatgtcaagaagttaactagatgttttagaagagagatgcagat  8187000                   --------->GLK1(2)                   --------->ARR11(3)                   <---------ARR14(3)                   <---------AGP1                   --------->ARR14(2)          <---------ANAC58        <---------ARR14(2)        --------->ARR14(2)       <-------GAMYB ------>ZmHOX2a(2)      <---------MYB46(3)      <---------DEAR3(2)     <---------DEAR3(1) <-----------RAV1(2)<------ZmHOX2a(2) ----TEIL<---------MYB46(3) ---->GLK1(2)      --------->ARR14(3)                   <-----------GT1 ---->ARR14(1)     <---------ARR14(2)              --------->AHL20(2)                  <---------ANAC58 ----GLK1(2)       <---------ARR11(3)             <---------AHL20(2)                   <---------ANAC58 --->ARR11(1)      <-----------ARR10              --------->AHL20(2)                   <---------ANAC46 ----ARR14(2)     <------ZmHOX2a(1)              <---------AHL20(1)        <---------DAG2           < --->ARR14(2)    ----------->ARR10               --------->AHL20(2)        <----------DOF2       ---- --->ARR10<---------ANAC58                      --------->YAB1   <-----------GT1    <----------DOF2<-   tcggcaggcggttcttgggaggatcttggagagcaaatgtacagggtccaaaataattttacaaatttttcttcacactttagggtctttcgtttaaaat  8187100  Previous    Next  AGI:  At5g24160.1    Description:  squalene monooxygenase 1,2 / squalene epoxidase 1,2 (SQP1,2). Identical to Squalene monooxygenase 1,2 (SQP1,2) [Arabidopsis Thaliana] (GB:O65402); similar to SQP1 (Squalene monooxygenase 1) [Arabidopsis thaliana] (TAIR:AT5G24150.2); similar to SQP1 (Squalene monooxygenase 1) [Arabidopsis thaliana] (TAIR:AT5G24150.1); similar to Squalene monooxygenase 1,2 (Squalene epoxidase 1,2) (SE 1,2) (GB:O65726); similar to Squalene monooxygenase 1,1 (Squalene epoxidase 1,1) (SE 1,1) (GB:O65727); contains InterPro domain Aromatic-ring hydroxylase; (InterPro:IPR003042); contains InterPro domain Squalene epoxidase (InterPro:IPR013698); contains InterPro do Range:  from: 8183078    to: 8186643    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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