Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                     <---------LBD16                                                  ============================HOX2a_HOX2a                                                  ------>ZmHOX2a(2)                                            --------->LBD16                                           --------->HSFB2a(2)                                           <---------HSFB2a(2)                                          <---------LBD16----------->GT1                                        <---------ARR14(2)                                        --------->ARR14(2)                                 <------MYB83    <------ZmHOX2a(2)                                 <------MYB46(1) =============================HOX2a_HOX2a                                <---------------AtSPL3 <--------P                   <------ZmHOX2a(1)                                <---------------AtSPL8--------->At5g28300         <---------TOE2(3) <                               <---------ANAC46 <---------ARR14(2)              ---------->DOF2  <---    ----------->RAV1(2)      --------->MYB111(2)--------->ARR11(3)     <------ZmHOX2a(1)      ------- -MYB46(3)------>ZmHOX2a(2)  <---------MYB46(3)<---------GLK1(1)    <-----------RAV1(2)       <------   attctgacctgatccaagaagttgggagaagttgttggtacagttctggagatcgcggtaagtgaaactcacaggagagtcacaaaggataagagagttc  8140700         <----------DOF2   <---------At4g35610  <---------RAP2.3(1) <---------RAP2.3(2) <---------RAP2.3(3) <---------RAP2.6(2) <---------RRTF1(2)                                                             --------->ANAC46 <---------ANAC58                                                               <---------ALFIN1 <---------ANAC58        <---------CCA1(2)                              --------->ANAC58 ---------LBD16          ------>ZmHOX2a(1)                              --------->ANAC58 -------DOF2   <---------ZAT18                                          --------->ANAC46 -->ARR11(3)   --------->ZAT14            <-----------GT1         --------->ANAC58 ---ARR11(3)  <---------ZAT6      --------->YAB1                  --------->ANAC58         <------ZmHOX2a(1)   tttgcggctctctttagtgttctcttcctatctaaattatagtataacaacatcccaagtagtgccacaagcacaagcatccccacaactataggaatca  8140800                                            <---------YAB1                                            --------->ICU4                                          <---------ICU4                             --------->ANAC46  <---------YAB1                             --------->ANAC55(2)                                              -------                             --------->ANAC58<---------ICU4                               --------->ANAC58                             <---------ANAC55(2)                                          --------->ANAC46          ---------->ID1     --------->ANAC58<--------HAHB4                            <---------REM1(2)    <---------DAG2<---------ANAC58        <--------HAHB4                      --------->ZAT6 -------- <---------GLK1(2)<---------ANAC58        -------->ATHB1                     --------->At4g35610 --------->ARR14(2)     <----------DOF2   --------->YAB1                --------->ATHB12  --------->ANAC58 <---------ARR14(2)--------->LBD16       --------->ICU4                <-------TEIL <---------ZAT6 --   ccagaaccttttgtcttaatccgtggctcttacgcgatttagaatcattattattcgaatttgagggataagattcattagctctagtcttcacgaaaag  8140900                      >>>>>>>>>E2Fd                      >>>>>>>>>E2Fc                     --------->LBD16                     ------>NtERF2                    --------->ANAC46                    --------->ANAC58                    --------->ANAC58            --------->HSFB2a(2)            <---------HSFB2a(2)           ------>ZmHOX2a(2)          --------->GLK1(1)          <------ZmHOX2a(2)         <---------ARR14(2)         <---------AGP1         --------->ARR14(2)         <---------ARR11(3)         --------->ARR11(3)         <---------ARR14(3)         --------->ARR14(3)     <-----------RAV1(2)                                      --------->YAB1 -->DAG2<------ZmHOX2a(1)                         --------->YAB1          --------->TOE2(3) -->DOF2<---------GLK1(2)                      ----------->RAV1(1) --------->At4g35610   <---------ALFIN1 ------->ALFIN1    <---------LBD16   <----------DOF2  <---------TOE2(3)   --------->TOE1(3)   ggttgagccaggatctcgaaacccgccaaaattcagactctttaaaatccaacaataaggcttctcatcatctaaaccataaactgaagctacacacttg  8141000                               <---------O2                               <---------TGA1a                               --------->O2                               --------->TGA1a                                    <---------MYB46(3)                            ------>ZmHOX2a(1)                          <---------HSFB2a(2)                        <---------ARR14(2)                             --------->HSFB2a(2)                        --------->ARR14(2)                        --------->HSFC1(2)                       --------->GLK1(1)                          --------->KAN4(1)                       <---------GLK1(1)                          <---------HSFC1(2)             ----                      ===================bZIP_DOF<---------RVE1(1)<---------KAN4(1)        <---------ANAC46                      <----------DOF2   --------->GLK1(1)         <---------HSFB2a(1) <------MYB83                 <---------At5g28300<---------ANAC46              --------->HSFB2a(1) <------MYB46(1)               ----------->HVH21   <---------At4g35610    ----------->HVH21       --------->MYB111(1)   caatctgacaaacacatctcaccgcatttcctcacgttgctgatatcgctgatattttcgatgacagaacgttctgaaaaatagtagttggtctcttgga  8141100                -------->P                --------->MYB52(1)             <---------At4g35610             --------->At4g35610       ------>ZmHOX2a(2)      <------ZmHOX2a(2)     --------->ARR14(3)     <---------ARR14(3)             <----------DOF2                                             <----     <---------ARR14(2)            <---------ANAC58                                     <------------     <---------ARR11(3)       <-----------RAV1(1)                                       -------------     --------->ARR14(2)  *TSS<---------TOE2(3)                                         <---------ANAC58     --------->ARR11(3)<---------YAB1                                                  <---------ANAC58     --------->AGP1<-------GAMYB   <---------ANAC58                              <---------ANAC58   ----------->ARR10<---------MYB52(1)                                           <---------ANAC58 ----->DEAR3(2) <---------At5g28300<---------ANAC46                 <---------ZAT14    <-------------   ccgtcgagatcttgaagctaccgttacgattaatgttgctttcacattcttggaccaaagatgagttgtctgaacagagtttagcgttttcttgatcagg  8141200        ------>MYB83        <---------ARR14(2)                                                        --------->ZAT2        --------->ARR14(2)                                                  --------->ARR14(2)        ------>MYB46(1)                                                     <-----------ARR10        --------->MYB52(1)                                                  <---------ARR14(2)      <---------MYB59                                                      <---------GLK1(1)     <-----------------AGL1                                                --------->GLK1(1)     -------->ZAP1                                                      --------->LBD16     XXXXXXXXXXXXXXXXXXXX>MIR171A                                    <---------At5g28300     ----------------->AGL1            <---------ANAC58              <---------DOF5.7(2)   <---------WRKY18(1)         <------NtERF2   <------MYB46(1)      --------->ARR14(2)      <-------- --ZmHOX2a(1)                <---------WRKY12  <------MYB83        <---------MYB52(1)      <---------ALFIN1 ---AGL15                    <---------WRKY38(1)                   --------->DOF5.7(2)  ----------->HVH21 -->AGL15          --------->YAB1      <---------ANAC58           <-----------HVH21    <-----------HVH21 ----AGL1   --------->LBD16<-----------HVH21  --------->MYB59     <-------GAMYB   <---------ZAT2   aagtttgaccgaaccgggcaaacataaacagtcagcgtttttcttggttcggtccaaattgcaaactccgttaccgcaaatcccagctatgtcacacggg  8141300           ----------------->AGL1                                                                   -          ----------------->AGL1                                                                    -          <-----------------AGL1                                             <-------GAMYB          <      <---------ZAT2 <---------TCP15(1)           <-----------HVH21        <---------TOE2(3)       --      --------->At4g35610     <---------ANAC58   --------->WRKY12  --------->LBD16            ------>MYB46(1)      --------->ZAT2 --------->PCF2     <-------TEIL             <---------LBD16              ------>MYB83      <---------At4g35610     <---------ANAC46   --------->WRKY38(1)      <---------At5g28300-------- -LBD16  ------>NtERF2        <---------ANAC58 <-------GAMYB   <-----------GT1<---------MYB52(1)  <--   tttgatacagctgcccattcagggacccattggcttgaaccgttcatgtcgttgtcccatcggtataaccggagattaccgttgttctctaataccaatc  8141400          --------->ARR14(2)          <---------GLK1(2)          <---------ARR14(2)        --------->LBD16                                                                            <-      <---------LBD16                                          <---------LBD16             ------>ZmHOX2a(1)    --------->ARR14(2)                                        -------->P         --------->ZAT18  ===    <---------ARR14(2)                                        --------->MYB52(1) --------->ZAT14  === -------->At4g35610                    <---------MYB46(3)  --------->At4g35610   <---------ZAT14  <-- -------->LBD16                 <---------YAB1      <---------MYB52(1)       <---------------AtSPL8<- ---------At4g35610    --------->TOE2(3)           --------->LBD16           --------------->AtSPL3-- ------->ANAC46        --------->TOE1(3)          <---------ANAC46    <---------ANAC58     ========== ->WOX13(1)<---------RVE1(1)  <-----------GT1    <---------LBD16 --------->LBD16 <-------TEIL   <---- -------LBD16         --------->ZAT6<-----------RAV1(1) <---------YAB1<---------ANAC58     ==========   tccgcagaaccggattttttgttaaccctaaattactactgttgttgtaattccggttatcatctaccgggttcttgtagacgtacactgctcctattga  8141500                              --------->ARR14(2)                            <---------MYB52(1)                           --------->LBD16                          --------->HSFB2a(2)                         <---------LBD16                        --------->MYB52(1)                     <---------At4g35610              <------ZmHOX2a(2)             <---------ARR11(3) --------GLK1(2)     <---------HSFC1(2)                ----------->RAV1(2)       --------->LBD16 =====================HOX2a_HOX2a                  <---------ARR11(3)           <---------HSFB2a(2) ====================HOX2a_HOX2a                   --------->ARR11(3)   --------->ARR11(3) ----ZmHOX2a(1)------>ZmHOX2a(2)              --------->At5g28300       <---------ARR14(2) --------ARR14(2)    --------->HSFB2a(1)     ----------->GT1           <---------CCA1(2) ------->ARR14(2)    --------->HSFC1(2)    <---------LBD16           --------->CCA1(2) ====================HOX2a_HOX2a       <---------ARR11(3)           --------->ARR11(3) -----TOE2(3)--------->ARR11(3)        --------->ARR14(2)      --------->TOE2(3)--------->HSFB2a(2) =====================HOX2a_HOX2a      <---------ARR14(2)------>ZmHOX2a(1)     <---------LBD16   ggattctccataaacgatcttgaagcttccggtatcgtcaagaactgcggtaacatctcctgtaacattagatatatctggtccggaccagtacgagtag  8141600  Previous    Next  AGI:  At5g24080.1    Description:  protein kinase family protein. similar to S-locus lectin protein kinase family protein [Arabidopsis thaliana] (TAIR:AT2G19130.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49550.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245) Range:  from: 8139256    to: 8141125    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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