Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                        <---------ANAC58                           ----                                                      <---------ANAC58                   <---------ANAC58                                                     <------NtERF2                       --------->DEAR3(1)                                                    ------>NtERF2                        <---------ANAC58                                                --------->ANAC46         --------->TOE1(3)       ----                                                ----------->HVH21        --------->TOE2(3)       ----                                               --------->SPL7  --------->ANAC58         <------NtERF2                  <---------RAP2.6(2)        <---------SPL7    --------->ANAC58     --------->MYB52(1)                  --------->ANAC46       --------->ANAC58      --------->ANAC46   <---------ANAC58  -                 <---------LBD16         --------->ANAC58    --------->MYB52(1)   <---------ANAC58<-- ----------->RAV1(1)<------NtERF2  --------->AtLEC2<---------DEAR3(1) <-----------GT1  <---------RAP2.3(1)   caacaacaatggaatcgtatgcggcaagagaaactccatgaagaagccatacgacggcgtttcaaacggaattaaccttaaattgctagcggcgagccca  8112300               ------->GAMYB           <---------WRKY38(1)           <---------WRKY45           <---------WRKY12         <-----------HVH21      <---------ANAC58      <---------ANAC58     ------->TEIL------->TEIL  <---------ANAC58                                                --------->At5g28300  <---------ANAC55(2)                                             <---------MYB52(1)  --------->ANAC55(2) --------->MYB46(3)                         <------MYB83  <---------ANAC58 <---------ALFIN1                              ----------->GT1 --------------->AtSPL8                                          <------MYB46(1) --------------->AtSPL3                                   <---------ATHB12 ----->ANAC58 --------->ANAC46                          ------>MYB46(1)                  --------->TOE2(3) ----->ANAC58 --------->ANAC58                          ------>MYB83               --------->ANAC46 ----->ANAC46 --------->ANAC58                     ------>NtERF2--------->MYB59 --------->ZAT14 -------->MYB52(1)--------->MYB46(3)              --------->DEAR3(1)            <---------ZAT14 -------MYB52(2)--------->ANAC46       <-----------GT1<---------MYB59       <---------ICU4   agtaacgtacttgtcaacgcaccactcaccatacttccaattttcgtcttctccgacctaatgaagtcggtaatttcatcagtatacaaaaccctagttt  8112400                                            --------->RAP2.3(1)                                            --------->ATERF1(1)                                            <------NtERF2                                           <---------ORA47(2)                                           <---------ATERF1(1)                                           ------>NtERF2                                           <---------RAP2.3(1)                                           <---------DEAR4(2)                                           <---------ERF1                                          <---------RAP2.3(2)                                          --------->ATERF1(2)                                          <---------DEAR3(1)                                          <---------ATERF1(2)                                          <---------RAP2.3(3)                                          --------->DEAR3(1)                                         --------->ATERF1(1)                                         <---------ABI4(1)                                        --------->LBD16                                        ------>NtERF2                                        <---------ATERF1(1)                                       <---------DEAR3(1)                                  --------->HSFB2a(1)                             --------->ANAC58          --------->DEAR3(1)             <---------At4g35610---------->DOF2      --------->At4g35610            <---------TOE2(3)--------->ANAC58<---------ANAC46                   <---------LBD16       <------ZmHOX2a(1)--------->ANAC46<---------RAP2.3(1)                  ----------->RAV1(2) ------->GAMYB      <-----------GT1   <---------LBD16<---------At4g35610   ------>ZmHOX2a(2)      ---   caacagagaggattgaggtgatttaccagacaccgaaagctccggcggcgaagagagcagcccattgtgaccagtgatcgtctggggagattagagggaa  8112500                              <------NtERF2                             ------>NtERF2                            <---------ANAC46                            <---------DEAR3(1)                           --------->RAP2.3(1)                           <------NtERF2                           --------->ATERF1(1)                          <---------RAP2.3(1)                          <---------ATERF1(1)                          ------>NtERF2                          --------->LBD16                         <---------DEAR3(1)                            <------NtERF2                         --------->RAP2.3(3)                           --------->ATERF1(1)                         --------->RAP2.3(2)                          ------>NtERF2                         --------->DEAR3(1)                           <---------ATERF1(1)                         --------->ATERF1(2)                          <---------DEAR4(2)                         <---------ATERF1(2)                         <---------DEAR3(1)                        --------->ORA47(2)                           --------->ATERF1(2)                        --------->ERF1                               <---------ATERF1(2)                        --------->DEAR3(2)                           --------->DEAR3(1)                        --------->DEAR4(2)                           <---------RAP2.3(2)                        --------->RAP2.6(1)                          <---------RAP2.3(3)                        <------NtERF2                               <---------ABI4(1)                        --------->ATERF1(1)                       <---------ATERF1(2)              --                        --------->RAP2.3(1)                       --------->ATERF1(2)              <-                       <---------ATERF1(1)                       --------->DEAR3(2)   <---------SPL7                       ------>NtERF2                             <---------LBD16     <---------ANAC58                    --------->ANAC58                            <---------At5g28300  <---------ANAC58                    --------->ANAC46                            --------->MYB52(1)<---------RAP2.6(2)                    --------->ANAC58                           <-----------GT1   <---------At5g28300-                <-----------HVH21                           <---------ZAT6      <-----------GT1   <--             <---------ARR11(3) --------->HSFB2a(2)   <---------ANAC46<---------ORA47(2)         ----           ----------->ARR10--------->DEAR3(1)        <---------ANAC58<---------RAP2.3(1)   <--------      <---------ANAC46--------->ANAC46                <---------ANAC58<---------ERF1 <---------ANAC46 ------>YAB1 --------->ARR11(3) <---------HSFB2a(2)--------->ALFIN1 --------->ATERF1(1)   -----------   tcgtagttgtgagtagaccttcacgcgccggcgtcgagatgaaacaagacgatgtggagtgagtgttaccggcggcgatttgttacggcgtatggttatt  8112600                             ------->PIF5                             <-------MYC4                             <-------PIF5                             ------->MYC2                             <-------MYC2                             ------->MYC4                             <-------MYC3                            --------->TGA1a                            <---------O2                        ----------------->PIF3(1)               <---------ANAC58               <---------ANAC58            --------->ALFIN1--------->O2          <---------MYB46(3)<---------TGA1a   --------->YAB1<------NtERF2  <---------YAB1--------->LBD16                            <---------ARR14(2) ------->ICU4 --------->ATERF1(1)                          --------->ARR14(2) --------YAB1 <---------LBD16------->MYC3         ----------->HVH21  >>>>>>>>>>>>>>>>>LFY -------->YAB1<------NtERF2 <---------ANAC55(2)  <---------ANAC46   --------->bZIP60(1)          <--- -------TOE2(3)<---------ANAC46                  <---------PCF2     <---------bZIP60(1)      <------- ----->YAB1 <---------DEAR3(1)--------->ALFIN1<---------ANAC46 <------MYB46(1)               <------- -YAB1   --------->ALFIN1   <---------ANAC46  --------->ALFIN1 ----------->GT1               -------- >GT1<---------YAB1   <------ZmHOX2a(1)    --------->GLK1(2)   <------MYB83--------->At5g28300   <---   gatgatgataagtggtggcgggaaggagacacgtggagcgatgagattgtgggggacagtggatttggtgataccactgtgaatagaagagccattgcac  8112700                                                                                                   <-                                                                  ------>ZmHOX2a(1)  --------->ATHB12                                                                 --------->TOE2(3)   <---------AHL20(2)                                                                 --------------->AGL15       --------                <---------TOE2(3)                                <---------------AGL15      ---------      <-------TEIL                                              ----------------->AG<---------AHL20(2)     --------->CCA1(2)                                          ----------------->AGL3      <-------- ------DAG2   --------->AHL20(2)                                <-----------------AGL1    <---------TOE2(3) --ZAT18      <---------AHL20(2)                                ----------------->AGL1<------------CBF --ZAT14     *TSS --------->ATHB12        --------->HSFB2a(2)   <-----------------AG<---------AHL20(1) ->ZAT14   --------->WOX13(1)             <---------HSFB2a(2) <-----------GT1       --------->AHL20(2) -------DOF2 <---------ATHB12          <----------DOF2<---------AHL20(2)            --------->AHL20(1)   tttttagatacaccaattaatgtttgaagtcccatattatacttttggaaacttattttttttgtttccttattcggctaaacaaatttattgagatatc  8112800                                                                      <---------AHL20(2)                                                                   --------->AHL20(1)                                                                   <---------ARR11(3)                               --------->ICU4                      <---------AHL20(1)                        ----------->RAV1(1)            <---------AHL20(2)                       --------->ANAC46   ---------->DOF2  --------->AHL20(2)                 <------                     <-----------GT1    <---------YAB1--------->AHL20(1)               --------->ZAT6 -----------CBF  --------->AHL20(2)   --------->YAB1  <---------AHL20(2)             <-----------GT1 ->GLK1(1)       <---------AHL20(2)  <---------YAB1   --------->AHL20(2)           <----------DOF2 >ARR11(3)     --------->AHL20(2) ------->TEIL        <---------AHL20(1)     --------->HSFB2a(2) -ARR11(3) --------->YAB1      <---------YAB1----------->GT1 <-----------GT1 <---------HSFB2a(2) ----   aaattgacgagaagcatattaatataccacataatgaatatgataaaagtttaaaataaaatttaacaatattttttttctaaaactttactctattttc  8112900                                                                                            ---------                                                                                           --------->AHL20(1)                                                                                           <---------AHL20(1)                           --------->AHL20(2)              ---------->DOF2  --------->TOE1(2)                      ----------->GT1             <---------AHL20(2)        --------->TOE2(2)                      --------->ANAC58            --------->AHL20(2)  --------->YAB1      --------->AHL20(2)               <---------ANAC58               --------->AHL20(2)     >>>>>>>>>MYB98  --------->ANAC58 -----GT1      <---------ANAC58              --------->AHL20(2)  ----------->GT1     --------->ANAC58 ----------->AGL15    --------->ANAC58       <---------AHL20(2)---------->DOF2  <------ZmHOX2a(1)  --   tatttttgtaatctatttcttgatacgaaaaaaataacaaataagaaataaataaaatcgataaagaaagtaacataacataggaagacgaaatatataa  8113000                                                                <---------ANAC46                                                                <------MYB46(1)                                                  --------->ATHB12    <---------GLK1(1)                                                  --------->YAB1<------MYB83                                                 <---------YAB1--------->MYB111(2)                                               <---------ICU4  --------->MYB52(2)          <---------YAB1                       --------->YAB1  <---------MYB46(3)       <---------AHL20(2)                  <---------AHL20(2)  --------->MYB111(1)      --------->AHL20(2)     >>>>>>>>>>GT-3b  --------->ICU4   --------->MYB55(2)      <---------AHL20(1)  <----------ID1   --------->AHL20(2)  <---------AtMYB61                    -      <---------AHL20(2)  ----------->GT1  --------->AHL20(1) <---------MYB55(1)                    -      --------->AHL20(1) ------------------------>ANAC81  <-------TEIL--------->GLK1(1)             < >CCA1(2) --------->ICU4---------->DOF2   --------->AHL20(2) <---------MYB52(1)<----------DOF2   ---- --------->GT1     <---------YAB1 ----------->GT1--------->ICU4--------->MYB46(2)     <---------ZAT6<   gaagaaaatataatgaatagtatgaaaaaagaaaaatagtaaaaaaaaattatgattagcttcgtttggtggaattctcttctttttagtgttttcatgt  8113100                                                                                                    <                                                        <---------WOX13(1)                          -                                                      --------->ATHB12                       <-------                                                      -------->HAHB4                        <-------- -------->AHL20(2)                                   --------->ICU4                         <-------- -------->AHL20(1)            ----------->GT1    --------->AHL20(2)            <---------------AtSPL8 ---------AHL20(1)       ---------->DOF2      --------->YAB1                ---------->DOF2 --------- --->TEIL            --------->ANAC58        <---------YAB1 <------ZmHOX2a(2)  <---------------AtSPL3 ---------AHL20(2)   --------->ANAC58      <----------DOF2 --------->ARR11(3)  --------------->AtSPL8   attttattgtcttcttgtttatcaagaaaaagaagttaatctagactttgataaaatgatggatcatggatgcccataaaaagagtacttctaatttttt  8113200  Previous    Next  AGI:  At5g24000.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G52540.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN74772.1); contains InterPro domain Protein of unknown function DUF819 (InterPro:IPR008537) Range:  from: 8110316    to: 8112713    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version