Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                           --------->AHL20(1)                                                                                         <---------AHL20(1)                                                                                     --------->ICU4                                                                                     <---------YAB1                                                                                   --------->YAB1                                                                                  <---------YAB1                                                                              >>>>>>>>>ARR2                                                                              >>>>>>>>>ARR1                                                                              >>>>>>>>>ARR2                                                --------->At4g35610           >>>>>>>>>ARR1                             <---------ALFIN1   <---------At4g35610         <---------YAB1--------->ATHB12                            --------->MYB46(3)<-----------GT1         <---------AHL20(2) --------->AHL20(2)            <-------TEIL <-----------GT1  ------>ZmHOX2a(1)           --------->AHL20(2) <---------AHL20(2)  --------->ANAC46    --------->YAB1      <----------DOF2         --------->YAB1----------->GT1     < ------->ARR14(2)     <---------ICU4   <---------YAB1            <-------TEIL<------ZmHOX2a(1)     --   ctatccccaatgggttcatcaccataatcaccctccccattatcctttttagcttccattctctgcattcatataaataggattgtgataatttattgca  8100900                                                          <---------MYB46(3)                                                          <------MYB46(1)                                                          --------->MYB52(2)                                                          <------MYB83                                                         <---------AtMYB61                                                        <--------P                                                       <-------GAMYB                                                      <---------ANAC46                                                      <------MYB46(1)          --------->AHL20(2)                                                      <------MYB83       --------->AtLEC2                                                     <------MYB46(1)   --------->CCA1(2)                                                     <---------MYB46(3)<---------GLK1(1)                                                   --------->ALFIN1    --------->GLK1(1)        -----                    --------->YAB1                 <--------P         <---------ARR14(2)        -----   <-----------GT1--------->AHL20(2)            <---------TOE2(3)     --------->ARR14(2)     <-------   <---------AHL20(2)   ---------->DOF2     <----------DOF2        <---------HSFB2a(2)       -------- ---------ICU4   --------->YAB1<-----------GT1  <---------TOE1(3)  --------->HSFB2a(2)     ---------- ------->AHL20(2)--------->AHL20(2)      ------->TEIL<------MYB83 <---------LBD16  --------->ANAC46   aatatttacatgttgtcaataaaaataaaagtataacaagttgtacctttgaggttgggttggtttcttctggatatgcaaataaacacaacttagaacc  8101000                                                                                              -------    ------->TEIL                   <---------ANAC58                                      --------->AHL20(1)  --------->YAB1                   <---------ANAC58                                      <---------AHL20(1) <---------ATHB12                 <-------TEIL             <---------YAB1                <---------ARR11(3) ---->ANAC58                     --------->CCA1(2)      <---------YAB1                   --------->AHL20(2) ---->ANAC58                    <---------GLK1(2)       <---------AHL20(2)           --------->YAB1 --ARR14(2)   --------->ARR14(2)--------->ARR11(1)    --------->CCA1(2)        <---------TOE2(3) ->ARR14(2)   <---------ARR14(2)--------->ARR14(2)   --------->ARR11(3)      ---------->DOF2  <------ ->ARR10--------->ATHB12        <---------ARR14(2)   <---------ARR11(3)      --------->MYB52(1)   gcaatgaacatcatgggaaccgtgagaagcacaagattcgtgcctagacatacaagatataattcttgaatactcaaaataaaggaatcaaaatattaaa  8101100                                                                                    <---------ANAC58                          --------->ARR11(3)                                        <---------ANAC58                      --------->AHL20(2)                               <---------ANAC58          <---------AHL20(2)         <---------------AGL15             <---------ANAC46         --------->AHL20(2)         ----------------->AGL3             <---------ANAC58         <---------AHL20(2)         ----------------->AGL1             <---------LBD16     --------->ICU4   <---------AHL20(2)                              <---------LBD16<----------DOF2 -->AHL20(2)         --------->AHL20(2)                 --------->ARR11(3)   <-------TEIL ---AHL20(2)   <---------HSFB2a(2)<----------ID1        <---------ARR11(3) <---------TCP16(1)   atgtgagataattaaatcgagaaattaataccttgagggccaaaataagtagtattgagatacttggagagtttcggggtccatttgcttttaaaaagat  8101200                                                                 <---------GLK1(2)                                                                <---------HSFC1(2)                                          --------->MYB46(3)    --------->HSFC1(2)               <---                                --------->ANAC58         <---------ZAT14                        <----                                --------->ANAC58   <---------TOE2(3)                            -----       --------->YAB1           --------->ANAC46  <---------DOF5.7(2)                <-----------GT1      <---------ATHB12      --------->AtLEC2    --------->DOF5.7(2)         <-----------GT1  --------   tagttgaaatcataatccaaaccaaaatccatccaagaaatagaaccaccattaacgtcttcactaagcttctcatatttcccattttttctcgtttata  8101300                                 --------->DAG2                             --------->LBD16                         ----------->GT1                            <---------ANAC46       <-----------TBP--------->ALFIN1          <--------                            <---------ANAC55(2)  --------------->AGL15                   --------->AHL20(2)     --------->ANAC46      <---------LBD16       <---------------AGL15                   <---------AHL20(2)  <-----------GT1         *TSS  ---------->DOF2 <-----------------AGL2                 ----------->TBP ------AHL20(2)        --------->ATHB51         ----------------->AGL3            <---------ZAT6 -----AHL20(1)        <---------AHL20(2)  --------->ATHB12 ----------->HVH21 <---------ANAC46 ---->AHL20(1)        <---------YAB1   <---------ANAC58  <---------At4g35610 <---------ANAC58 ->AHL20(2)      <---------TOE2(3)     <---------ANAC58  --------->At4g35610 <---------ANAC58<-------   tatttatccacaatgtattgatgtataattgcggaaaagtttcttgatttgctatttatagctgaagggaggggtaatgtcgtagtcttatataaatgtt  8101400                                                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                            <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                 <---------ANAC46                                 <---------ANAC58                           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)              <---------AHL20(2)                         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)         --------->AHL20(2)                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)     --------->YAB1                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) --------->AHL20(1)                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)<---------AHL20(1)                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)  <---------AHL20(2)                     xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)   --------->AHL20(2)    <---------AHL20(2)                    xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)     <---------ARR11(3)   --------->AHL20(2)                    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)    --------->ARR11(3)<---------AHL20(2)                   <---------ZAT18          <xxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)  <---------AHL20(2)                   --------->ZAT14        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)<---------YAB1       -                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) <---------AHL20(1)   <---------YAB1       <---                <------------CBF <---------ANAC58 --------->AHL20(2)  <---------AHL20(2)      ------- -TOE2(3)      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)   --------->AHL20(2) <---------ICU4      <------ ----RAV1(1)   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   --------->AHL20(1)--------->ICU4    <---------AtLEC2   gtatgctaagagcaactccattgcacaaataagttgagtgtcttcttacacttaaaatataatatattcaaaataaatattattttaatttttgaatgtc  8101500                                                                                               ------                                                                                           <---------AHL20(1)                                                                                           <---------AHL20(2)                                                                                           --------->ARR11(3)                                                                                           --------->AHL20(1)                                                                                <---------AHL20(2)                                                                        ------>ZmHOX2a(1)<---------TOE2(3)           xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                        --------->TOE2(3)<---------AHL20(2)     ---------->DOF2                                                --------->ARR11(3)  --------->AHL20(2) <---------TOE2(3)                                                  <---------ARR11(3)  --------->YAB1 --------->DOF2                                                    --------->CCA1(1)  <---------YAB1 -------DOF2                                                   --------->AHL20(2)  --------->ICU4 -->ARR11(3)      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)         <---------AHL20(2)  <---------YAB1 ---ARR11(3) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)<------ZmHOX2a(1)--------->RVE1(1)<---------ICU4   tttaaagtaaagacacattgtcttaaatgtctaaatagagacatttttgagaggatgtctctaatttaaatatccttcatatttgattattaatattttg  8101600                 ----------->GT1             <---------YAB1          --------->AHL20(2)                                                                     ====       <---------AHL20(2)                                                                     <------       --------->AHL20(1)                                                                    <-------       <---------AHL20(1)                                                      <---------At4g35610  <       --------->AHL20(2)                                                  <---------GLK1(1) <-------   <---------AHL20(2)                     --------->ANAC55(2)             <---------ARR14(2)---------  --------->AHL20(1)       <---------ARR11(3)                             --------->ARR14(2)---------  --------->AHL20(2)       --------->ARR11(3)               <---------TOE2(3)  ----------->RAV1(2)<--  <---------AHL20(2) ---------->DOF2      <---------ANAC55(2) --------->ARR11(3)  ------>NtERF2  <--- ----->GT1<---------AHL20(2)     <----------DOF2          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) <----   taaatttaatattttaatattgttaaagacatcttctttctattatgtaatgtagttgctctaagatttgtttgtggattcccctgcctatgttttgacc  8101700 ===========================================MYC_MYB ---At5g28300 ----GT1<---------TOE2(3)                                                          --------->AHL20(2) ---------MYB46(3)                        --------->ANAC58                      <---------AHL20(2) --WRKY18(1)                              --------->ANAC58                     --------->AHL20(2) >WRKY38(1)                       ==============================================MYC_MYB   <---------GLK1(2) -->HVH21                         <---------ANAC58                             --------->YAB1 -------MYB52(1)                  <---------TGA1a    --------->TOE1(3)        <---------YAB1 <------- ----GAMYB      <---------YAB1    --------->TGA1a    --------->TOE2(3)   --------->MYB52(2)  -------- -----MYB46(3)  <---------AHL20(2)<---------ANAC58   <---------MYB59   <--------P  <---------AHL20(2)   gttggatgttgatgtttttttattgaaaaaaaacagtcgtgagcaagcacataaacctaaacacataaacctggttagctattatatatatagattatct  8101800  Previous    Next  AGI:  At5g23980.1    Description:  ATFRO4/FRO4 (FERRIC REDUCTION OXIDASE 4); ferric-chelate reductase. similar to FRO1 (FERRIC REDUCTION OXIDASE 1), ferric-chelate reductase [Arabidopsis thaliana] (TAIR:AT1G01590.1); similar to ATFRO5/FRO5 (FERRIC REDUCTION OXIDASE 5), ferric-chelate reductase [Arabidopsis thaliana] (TAIR:AT5G23990.1); similar to FRO2 (FERRIC REDUCTION OXIDASE 2), ferric-chelate reductase [Arabidopsis thaliana] (TAIR:AT1G01580.1); similar to Fe(III)-chelate reductase [Citrus junos] (GB:ABJ16556.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49469.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN74772.1); contains InterPro domain Cyto Range:  from: 8098055    to: 8101326    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version