Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                <------                         <---------AHL20(2)                                                   <------                        <---------AHL20(2)                                     <---------ANAC58 -----                        --------->AHL20(2)                                     <---------ANAC46 -----                     -------->ATHB1                                            <---------ANAC58 -----                     <---------ICU4                                            <---------bZIP60(2) --       ---------->DOF2 <---------YAB1                                 <---------AHL20(2)      <------ --------HAHB4      <---------AHL20(2)                                --------->AHL20(2)  ------->GAMYB -------->ATHB12    --------->AHL20(2)                           --------->ARR11(3)      --------->MYB46(3) ---------ICU4      --------->AHL20(1)                           --------->ARR14(2)   <---------WRKY38(1) ------->ICU4       <---------YAB1                     <---------AHL20(2)<---------AHL20(2) ------->TEIL --------YAB1       --------->ICU4                  --------->YAB1   <---------AHL20(2)  <---------MYB52(2) ------ICU4      --------->AHL20(2)                 ----------->GT1  --------->AHL20(2)--------->MYB52(1) ----->YAB1      <---------AHL20(2)              --------->YAB1  <---------ARR11(3)   <---------WRKY12 ---->ICU4       --------->ICU4                <---------YAB1<---------LBD16<-----------RAV1(1)------ -----YAB1  ----------->GT1   <---------YAB1<---------AHL20(2)   <---------ARR14(2) <---------PCF2--- -->YAB1   ----------->GT1  <---------ICU4  --------->AHL20(2)  <------ZmHOX2a(1)--------->ALFIN1----   aatcatttgcaaagtggaaaaaattattaatttttatttcaaatgttttattaatagtaaatttcaggatattaatttatgtcgtgggccaacggaccta  8042500       <---------ANAC58       --------->ANAC55(2)       <---------ANAC58       <---------ANAC55(2)      --------->MYB52(2)          ---------->DOF2    <---------MYB52(1)      --------->RAP2.6(2)   <---------RAP2.6(3)      ------>NtERF2  <---------MYB46(3)       <---------RAP2.6(2) ---MYB46(2)               --------->ATERF1(2) ---MYB59                  <---------ATERF1(2) ---->MYB52(1)             <---------ANAC46 ->MYB83  -------->P       <---------DEAR3(1)                                                       - ->MYB46(1)               --------->RAP2.6(3)        <---------DOF5.7(2)   <------MYB46(1)          < ----->GAMYB          <-----------RAV1(1)            --------->MYB52(1)    <------MYB83            -- ---MYB111(1)    <---------MYB52(1)                --------->DOF5.7(2)    --------->MYB59          <- ----->HVH21   --------->ANAC46  --------->ICU4 ------>MYB46(1)           <---------AtMYB61        -- ------>MYB46(3)<-----------HVH21<---------ATHB12 <-----------HVH21     <---------MYB52(1)        --- ------>DOF2--------->TOE2(2)<------NtERF2      ------>MYB83       <-----------GT1  ----------->GT1<-   acagccgttacttacctccgtcatttgtggcggcaataaagaagaataccaacgttaccggtttgagtttatcggtttggttcaattggttataacaaaa  8042600              ---------->DOF2            ------>ZmHOX2a(1)            <---------------AGL15            =================================MADS_MADS           --------->TOE2(3)    --------->AHL20(2)                                                --------->YAB1    <---------AHL20(2)                                            <---------AHL20(2)   <---------AHL20(2)                                            --------->AHL20(2) -------->AHL20(2)                                               <---------AHL20(2) ---------AHL20(2)                                          --------->MYB46(3) ------->AHL20(2)                                          --------->ANAC46                    ------ --------AHL20(2)                                          --------->ANAC58     --------->AHL20(2) ------->AHL20(1)                 ---------->DOF2          --------->ANAC58     --------->AHL20(1) ------>AHL20(2)              --------->YAB1   --------->ZAT6 --------->WOX13(1)<---------AHL20(2) -- --------AHL20(1)            --------------->AGL15 --------->AHL20(2)<---------ATHB12<-------TEIL<---   attaatttatattcctaaaaacagagaaacactcataaaagtagtattttcactaaaatacaaccaattaaatcataagaaataaaatgcattcgaattt  8042700                                                                       --------->ANAC46                                                                       <---------ANAC55(2)                                                                       --------->ANAC55(1)                                                                       --------->ANAC55(2)                                                                       --------->ANAC58                                                                       --------->ANAC58      --------->AHL20(2)                                            <-------TEIL              -------      <---------AHL20(2)                                           <-----------HVH21        ---------   --------->YAB1                                              --------->SPL7       <---------ZAT6   --------->AHL20(2)                                      <---------------AtSPL3   ----------->GT1 --->AHL20(2)         --------->MYB52(1)                   <---------------AtSPL8 <---------ZAT14 ------->ZAT6    <---------YAB1               <-----------GT1<---------SPL7       <---------ZAT18 --------GT1   ----------->GT1  --------->AHL20(2)     <---------ANAC55(2)        --------->ZAT14   aacaataaaaaaatgtattgtgaataactgaaaattcaatagttgatttttctggttaagtatggtacggttcacgtaaaccagtacagttagaaccggc  8042800                                                    <---------ALFIN1                                                   --------->MYB46(3)                                                   <---------MYB55(2)                 <------------MYB.PH3(1)                                                  ------>MYB83                      --------->MYB52(1)     ------->GAMYB                                ------>MYB46(1)                --------->YAB1   -------->P                         ----------->GT1      ---------->ID1      *TSS <-----------GT1 --------->MYB46(3)         --------->DOF5.7(2)   -------->P                  --------->ANAC58 -->LBD16                   <---------MYB52(1)  --------->AtMYB61             --------->ANAC58 >DEAR3(2)                 <-------GAMYB       --------->MYB46(3)             --------->ANAC46 <-----   aaaacaacccaaatgaaaaatcccgtctccgttatctatttagtataaaaccaaccacttcgtcttcttcatttcttcacaagtcataaccgtttcaaat  8042900                                                                      <---------GLK1(2)                                                              --------->CCA1(2)                    <-                                                         ---------->DOF2                         ----                                                       <---------ATHB12--------->GLK1(2)       <-----                 <----------DOF2               <---------ANAC58 <---------ANAC58          -----------       <----------DOF2   <---------DAG2        <---------ANAC58 <---------ANAC58         <------NtERF2 ----GLK1(2) <----------DOF2        <-------TEIL    <---------------AGL15              --------->ALFIN1   tctctctctctttctctttctttctcaatttttgtagtttcatactctagcttactaatcaaagatgcgagagattcttcacatacaaggtggccaatgc  8043000                                            --------->ANAC55(2)                                            <---------ANAC55(2)                     <---------HSFB2a(2)    --------->ANAC46                     --------->HSFB2a(2)    --------->ANAC58                    <---------LBD16         --------->ANAC58                ----------->ARR10          <---------LBD16        --------->CCA1(2)            <---------At4g35610          <---------ZAT2          --------->ARR14(2)        ------>ZmHOX2a(2)                --------->ZAT2          <---------ARR14(2)       <------ZmHOX2a(2)               ------>NtERF2             <---------ARR11(3)      --------->ARR14(2)              --------->DEAR3(1)         --------->ARR11(3)      <---------ARR14(2)             --------->ATERF1(1)       ---------->TaMYB80 --------ARR14(2) --------->ARR11(3) <----------CDC5           ----------->ARR10 ----->LBD16<---------ZAT2           <------NtERF2       <---------LBD16 ----LBD16  --------->ZAT2          ------>NtERF2 ------>ZmHOX2a(2)  --------->TOE1(2) ------>AGL1--------->At4g35610     <---------RAP2.3(1)----------->HVH21         --------->ATHB12   ggaaaccagatcggagctaagttctgggaagtagtttgcgccgagcacgggatcgattcgacgggaagataccaaggagagaacgatttgcaactcgaac  8043100                                                  <---------RAP2.6(3)                                                  ------>NtERF2                                                  <---------SPL7                                                  --------->ORA47(1)                                                 --------->RRTF1(3)                                                 --------->RAP2.3(3)                                                 --------->DEAR3(1)                                                --------->DEAR4(2)                                                <------NtERF2                                                --------->ORA47(2)                                              --------->ANAC46                                             ------->MYC2                                             ------->MYC3                                             <-------MYC2                                             <-------MYC3                                             ------->PIF5                                             <-------PIF5                                            <---------ALFIN1                                        <                                            --------->TGA1a                                         <                                        --------->SPL7                                             <-                                     <---------ANAC58                                             ---                                     <---------ANAC58                                             <--                                    <-------TEIL--------->RAP2.3(1)                              <---                                  --------->ARR11(1)                                            <----                                  <---------GLK1(2)                                          ========                                  --------->ARR14(2)                                         ------>ZmHOX2a(2)                                  <---------ARR14(2)                                        =========                                 --------->HSFC1(2)                                         ---------                                 <---------HSFC1(2)                                         <------ZmHOX2a(2)                                 --------->HSFB2a(1)  ===============HOX2a_HOX2a            ---------                                 <---------HSFB2a(1)  ------>ZmHOX2a(1)                    --------->ARR11(3)                                ----------->ARR10--------->RAP2.3(2)                       --------->AGP1                             --------->LBD16--------->ANAC46                               <---------GLK1(2)                            <---------ANAC55(2) --------->ATERF1(1)                        <---------ARR14(2)                            <---------ANAC58<---------TGA1a   ------>ZmHOX2a(2)            --------->ARR14(2)                            <---------ANAC46--------->ANAC58--------->ARR11(3)            <---------At4g35610                            <---------HSFB2a(2)------>NtERF2<---------AGP1                --------->At4g35610                            --------->HSFB2a(2)<---------ATERF1(1)  ----------->RAV1(2)  ----------->ARR10                            <---------ANAC58--------->ANAC58--------->ARR14(2)        <-----------HVH21                           <---------LBD16<---------ALFIN1  ------->TEIL             <---------ZAT6<-                        <---------ZAT2<-----------HVH21     <---------ARR14(2)<---------TOE2(3) -----   gagtcaatgtctactacaacgaagcgagttgcggaagattcgtcccacgcgccgtcctcatggatctagagcctggtactatggatagtgtcagatccgg  8043200            ------>ZmHOX2a(2)            ================HOX2a_HOX2a           =================HOX2a_HOX2a           <------ZmHOX2a(2)          <---------ARR14(2)          --------->AGP1          --------->ARR14(2)          <---------GLK1(2)          --------->ARR14(3)          <---------ARR11(3)          <-----------ARR10          --------->ARR11(3)         <---------CCA1(2)        ----------->ARR10                                --------->ICU4     <-----------HVH21                               --------->At5g28300  --------->SPL7                                     <---------MYB52(1)  --------->SPL1(2)                                 --------->LBD16 --------->SPL1(1)                                <------NtERF2 <---------MYB52(1)                              --------->ABI4(2) <---------SPL1(1)                              --------->ALFIN1 ---------SPL7                                --------->At4g35610 ---------SPL1(2)                             --------->LBD16 --------ANAC58                             <---------LBD16 ------------>AtSPL3                      --------->ARR14(2) -------------AtSPL3                      <---------ARR14(2) ---------------SPL14<---------YAB1  <------MYB46(1)----------->GT1             --------->ANAC46 -----MYB52(1)  <---------ANAC58     <------MYB83------>NtERF2               <---------REM1(2) ===========================HOX2a_HOX2a  --------->WOX13(1)                  <---------ZAT14 ===========================HOX2a_HOX2a <---------WRKY38(1)                  --------->ZAT14 <------- >CCA1(2)<---------At4g35610        --------->MYB59--------->ATERF1(2)  --------->ZAT18  <----------CDC5 >ARR14(1)<---------ARR14(3)     <---------ARR14(2)<---------ATERF1(2) <------ZmHOX2a(1)<---------At4g35610 --------ANAC58 <---------ANAC58 --------->ARR14(2)<---------ANAC46--------->MYB52(1)   --------->At4g35610 ------------->SPL14 ------>ZmHOX2a(1) --------->WRKY18(1)         ---------->DOF2     --------->ALFIN1   tccgtacggtcagatcttccgtcctgataacttcgtatttggtcaatccggtgccggtaacaattgggctaaaggacactacactgaaggtgctgagctt  8043300                              <---------ZAT2          <---------HSFB2a(2) --------->ZAT2   <---------ANAC58          --------->HSFB2a(2) --------->At4g35610     ----------->GT1       <---------MYB52(1)     <---------At4g35610  <---------AtLEC2     <---------ANAC58      <------ZmHOX2a(1)   <---------ANAC58     <---------ANAC58    --------->ANAC58      <---------ANAC46              ------>ZmHOX2a(2) --At4g35610             --------->ANAC58<---------YAB1      <---------GLK1(1)         <---------ANAC46   atcgattccgttctcgatgttgttcgtaaggaagctgagaattgtgactgcttgcaaggttagaaatcgctctcttcgatctcgtagttgtgtagaaact  8043400  Previous    Next  AGI:  At5g23860.1    Description:  TUB8 (tubulin beta-8). Identical to Tubulin beta-8 chain (TUBB8) [Arabidopsis Thaliana] (GB:P29516;GB:Q9FF94); similar to TUB7 (tubulin beta-7 chain) [Arabidopsis thaliana] (TAIR:AT2G29550.1); similar to TUB2 (Tubulin beta-2), structural molecule [Arabidopsis thaliana] (TAIR:AT5G62690.1); similar to TUB3 (TUBULIN BETA-3), structural molecule [Arabidopsis thaliana] (TAIR:AT5G62700.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15467.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62796.1); similar to Tubulin beta-1 chain (Beta-1-tubulin) (GB:P37392); contains InterPro domain Beta tubulin, autoregulation binding Range:  from: 8042879    to: 8044822    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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