Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                         --------->YAB1                                                                          <---------ANAC58                                                                          <---------ANAC58 --------->DAG2                                                            --------->ARR11(3) --------->LBD16 ------        ----------->GT1                                     <---------ARR11(3)--------->HSFB2a(2)     <---------AtLEC2                                      --------->CCA1(1)  --------->ANAC46 ------ ------>YAB1                      <-----------GT1          --------->RVE1(1)  <---------HSFB2a(2) ------YAB1               <---------MYB52(1)        ----------->GT1    ---------->ID1 <---------YAB1- ------ATHB12            <---------RAP2.6(3)      <---------ZAT14    <-----------RAV1(1)  ---------->DOF2   tcattctgcatggttatttcacttagccgttttttttttcatttttggtgagaacagagaaatatctcattttgttgcttccgaaactatcataaagtat  8033300               --------->ARR14(2)      ----------->GT1                                                                           <----     --------->ANAC58                                                                      <---------DAG2     --------->ANAC58                                                                      <---------  <---------ZAT14     <---------ZAT18                   --------->TOE2(3)         --------->ANAC58  --------->ZAT14     <---------ETT(2)                 <---------ICU4             --------->ANAC58 --->ARR14(2)  <---------ARR14(2)                --------->At4g35610           <---------MYB52(1) --->ZAT14 ---------->DOF2      ----------->GT1--------->ZAT18             ------->TEIL --------->ZAT6 -------->ANAC46--------->MYB52(1)            --------->ALFIN1 --------->MYB52(1)--------->SPL7 <----   acactgcaaggtataaagaaccggtccacaaatacagtgaaattgaaggtgtgctaaacattagataactggttatgcacccttacgctaacactttttc  8033400                                                                                <---------ANAC58                                                                 --------->AHL20(2)                 <                                                               <---------MYB52(1)                   -                                      <---------ARR11(3)     ----------->GT1    <---------ANAC58    <                                      --------->ARR11(3)<---------ANAC58      <-----------GT1       <                                <---------ANAC58    <----------DOF2         <---------DAG2      -----       <-------TEIL             <---------ANAC58 ------>NtERF2<---------RAP2.6(3)    <----------DOF2- -----ANAC58             <---------ARR11(3)      <---------RAP2.6(3)        <----------DOF2     <---- -DOF2--------->CCA1(2)--------->ANAC58         --------->RAP2.6(2)   --------->TOE2(3)     --------- -----ANAC58           --------->ANAC58--------->CCA1(2)<---------ANAC58 <-----------GT1    <--------   ttgctaagatacaacatcaagagtcaagacatttccttgagatatataggccgactttgctagccgttaaaatgttaactttacgttcttttcaaatctg  8033500                                                        <-------PIF5                                                        ------->MYC3            <-----------GT1                             <-------MYC2                   ----------->GT1         <---------YAB1                                 ------->PIF5                  <---------TOE1(3)       --------->YAB1                                   ------->MYC2                  <---------TOE2(3)      <---------YAB1                                    <-------MYC3                  --------->DAG2   <---------AHL20(2)                                  --------->O2                   --------->MYB59  --------->AHL20(2)            ------>ZmHOX2a(2)      <---------TGA1a            <------MYB46(1) ---------ARR11(3)             <------ZmHOX2a(2)       ==================================MYC_MYB -------->ARR11(3)     --------->HSFB2a(2)             <---------O2               <------MYB83  <---- ---------ARR14(2)     <---------HSFC1(1)              --------->TGA1a           --------->MYB111(2) ---------GLK1(2)      <---------HSFB2a(2)             --------->ANAC46          --------->MYB111(1) ---->At4g35610  --------->ARR14(2)            --------->AHL20(2)                --------->MYB59----- -------->ARR14(2)     --------->HSFC1(1)  --------->LBD16                       --------->MYB46(2) -----At4g35610  <---------ARR14(2)       --------->HSFB2a(2)  <---------YAB1   <--------P   -------- >ARR14(2)-------->HAHB4      <---------ARR14(2)       --------->bZIP60(2)      <---------MYB55(1) -ARR14(2)--------->YAB1      --------->ARR14(2)       --------->ANAC55(2)--------->DAG2     --------   cagattttataataatacagttcttctagacggatcggtctctcccagataaaatccacgtgattgtgaatgagaaaaattggtaggtaaggtaataaaa  8033600          --------->YAB1         <---------YAB1     --------->GLK1(2)        --------->ARR11(3) --------->ARR14(2)        <---------ARR11(3) --------->ARR11(3)      <---------YAB1       <---------GLK1(2)      --------->ICU4       <---------ARR14(2)             --------->CCA1(2)    --------->YAB1       <---------YAB1                  --------->ARR11(3)   <---------YAB1        <---------TOE1(3)              --------->AHL20(2)   --------->ICU4        <---------TOE2(3)          --------->AHL20(2)    <---------ZAT18  <---------TOE2(3)<---------AHL20(1)               <---------AHL20(2)<---------ICU4 -----AHL20(2)     --------->AHL20(1)           ----------->GT1      <---------YAB1 ---->AHL20(2)     <---------AHL20(2)      --------->ALFIN1       <---------AHL20(2)           <----- ->AHL20(2)        --------->AHL20(2)    <---------ANAC46--------->AHL20(1)                   ------- ->YAB1--------->YAB1 <---------AHL20(2) <-----------RAV1(1) ----------->GT1        <------ZmHOX2a(2)   aattgatgatgatcatactaatattttaagattctcgcttattatgtgggagattaaaatatatggatataatttttgcacttacgatcccatctactta  8033700                                                  ------>MYB46(1)                                                  ------>MYB83                            <----------DOF2                                                <---------MYB59                         <---------HSFC1(2)                                           <---------REM1(1)                            --------->HSFC1(2)                     <---------ANAC58     --------------->AtSPL8                    --------->ANAC46                     <---------ANAC58    *TSS   <---------MYB111(1)           --------->CCA1(1) ----ICU4  <---------AHL20(2)    --------->YAB1 <---------MYB46(2)            --------->RVE1(1) -->ICU4  --------->AHL20(2) ---------->DOF2  ------->TEIL                --------->AHL20(2)      xxx   ttatgtagattataaaatagcaggcttgcataaaagcataacatgatgtaccaaacttgttagtcaaacaaaaaaaaaaaatatccaagaagctttgaag  8033800                                                                            ------>NtERF2                                                                           --------->DEAR3(1)                                                                         ------>NtERF2                                                                        --------->DEAR3(1)                                                                       <---------At4g35610                                                                       --------->At4g35610                                                                      <---------ATERF1(1)                                                                    --------->ZAT14                                                                    <---------ZAT14         <--------                                       --------->ANAC46        <----------DOF2              ---------                                      ------>ZmHOX2a(1)       <---------ANAC58      <---------YAB1 xxxxxxxxxxxxx>smallRNA(s)   <----------DOF2                  <---------ANAC58<---------ATHB12-------   aaccatggcgatgtctcatgtccagcctgtgcttttcttcctcgcatcactcttcttcttactggctttgtgcagcgccaacgattttgaatattgcacc  8033900                                                      -------->HAHB4                                                      --------->AHL20(2)                                                  <---------AHL20(2)                                                  --------->AHL20(2)                                             <---------TOE1(2)                                          <---------ANAC58                                          <---------ANAC46 -ZAT18                                   <---------ANAC58 >ZAT18                             <---------AHL20(2)--------->YAB1 ---->RAV1(1)                     <---------AHL20(2) <---------YAB1         --------->WOX13(1)   agtaagtatcgatttgttaagtcttcaatgttctatattttttttcgtgtgtttaattatagaaaacccctataaaaccaattagtttgacatatgaatt  8034000                                                                                      <---------ANAC58                                           ------>ZmHOX2a(2)                          <---------ANAC58                                          <------ZmHOX2a(2)                           <---------ANAC46                                          --------->CCA1(2)                          <------NtERF2                  <-----------GT1        --------->ARR11(3)                  --------->ICU4       ---  --------->AHL20(2)                     <---------ARR11(3)               <---------YAB1          === <---------AHL20(2)                      <---------AGP1  ----------->RAV1(2) <---------YAB1<---------ANAC46 --------->AHL20(2)  <----------DOF2     --------->AGP1<-----------GT1    --------->ICU4<---------CCA1(2)   caaataaataagtggatttttttctttcttagaaagatgtatagatctaagtgttttttacctgcagaaaatggacatgattatggtgtcgtctcttgga  8034100              <------MYB83              <------MYB46(1)             --------->ALFIN1     ------->GAMYB            <--------P          ------>MYB83            --------->ALFIN1    ------>MYB46(1)        <---------ANAC58       ------>MYB46(1)        <---------ANAC58       ------>MYB83                       --------->ANAC58        <---------ANAC46       <---------ALFIN1                   --------->ANAC55(2)     <----------DOF2        --------->ANAC46         <------MYB83 --------->ANAC58  --------->ARR11(3)   <------ZmHOX2a(1)             <------MYB46(1)  <---------ARR11(3)<-----------RAV1(2)             --------->MYB59             ------->TEIL   <----- --->ZmHOX2a(2)    <------NtERF2-------->P       ------->TEIL     <---------ANAC55(2)    <---------YAB1 =============================HOX2a_HOX2a <---------YAB1    <---------ANAC46   <---------CCA1(2)   tcgaggtctttcgggttgggcctcaggaaaacccaaccctcactataaatgtatttggtactgcgagtaagtaatagttttgaatcttttgatgattttt  8034200  Previous    Next  AGI:  At5g23830.1    Description:  MD-2-related lipid recognition domain-containing protein / ML domain-containing protein. similar to MD-2-related lipid recognition domain-containing protein / ML domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G23840.1); contains InterPro domain MD-2-related lipid-recognition (InterPro:IPR003172) Range:  from: 8033741    to: 8034933    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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