Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                         --------->ZAT6     ------>MYB83                                                --------->AHL20(2)        -------->P               --       <---------AHL20(2)                     <---------TOE2(3)          ------>ZmHOX2a(1)         -- ------>REM1(1)                             <---------AHL20(2)     ------->TEIL                  ---- ----MYB52(1)                              <---------YAB1  ---------->DOF2------>MYB46(1)    -------- --->GT1                             <---------YAB1  <-----------GT1--------->GLK1(1)    <---------AHL20(2)   acaacttatgtaaatgtaattcgtatttagtatgaaattttgatttttaatgaattaactctaaagacgaatttcctaccatgttttatattttaaaact  8030900                       <---------ICU4                       --------->ATHB12                       --------->ATHB51                       -------->ATHB1                                 --------->DAG2                      <---------YAB1                                  <---------TOE2(3)                      --------->ICU4                                  --------->MYB59          ------                      <---------ATHB51                 --------->AHL20(2)           <-----------RAV1(1)      --------->WOX13(1)              --------->WOX13(1)   <---------AHL20(2)     <---------ANAC58 ------->YAB1         <---------AHL20(2)               <---------AHL20(2)         <---------ANAC46 ------->TOE2(3)      --------->AHL20(1)<---------ATHB12 <---------YAB1           <---------ANAC58 ---->P         <------NtERF2       <-------TEIL      <---------AHL20(2)  ----------->GT1      <----- ->ZAT6 <---------ATHB12      ---------->DOF2   <------NtERF2       <---------MYB52(1)   ---------->ID1   accataaacaatcaaggccccaaaattattggaaaagattcaatcaaggccccaaaattattttttttcggtaaggtagtcaattcgtgttgtcgttata  8031000                                                         --------->AHL20(2)    ------>ZmHOX2a(2) <<<<                                                        <---------AHL20(2)    <------ZmHOX2a(2)  <<<<                                                    <---------YAB1           --------->ARR14(2)  <<<<   ------->MYC3           ----------->GT1<---------AHL20(2)                  <---------ARR14(2)  <<<<   <-------MYC3          ----------->GT1--------->AHL20(1)            <---------HSFB2a(2)       ----- --->HSFB2a(2)          --------->DAG2  --------->AHL20(2)            --------->HSFB2a(2)       ----- ----HSFB2a(2)         ---------->DOF2  <---------AHL20(2)      --------->ARR11(3)      --------->ANAC46   gaacatgtggttttgtcaaaaaaaaaaaagtttaaaatcaaatttaatgtgtttataaataatatagttcttcgagacggatcggtctctccgaaatgaa  8031100  ------->MYC3  ------->PIF5                  --------->DAG2  <-------PIF5                  --------->MYB59  <-------MYC3                  <---------TOE2(3)  ------->MYC2              <------MYB83  <-------MYC2              <------MYB46(1) ================================MYC_MYB --------->ANAC55(2)       --------->MYB59 --------->ATHB51 <---------O2              --------->MYB111(1) --------->O2              --------->MYB46(2) <---------TGA1a           <---------MYB46(3) --------->bZIP60(2)       --------->MYB111(2) --------->ANAC46         <---------MYB55(1) <---------WOX13(1) ============================bZIP_DOF      -------->HAHB4 ==================================MYC_MYB <--------ATHB1 --------->TGA1a          <--------P----------->GT1     --------->ZAT6                              < <<<<<GATA-2             <------NtERF2     <---------ICU4           <-----------GT1                <- <<<<<GATA-3             <-------GAMYB    <---------ATHB51       --------->YAB1              -------- <<<<<GATA-4             <---------MYB52(1)--------->ATHB12     <---------YAB1            --------->ALFIN1 <<<<<GATA-1            <---------MYB46(3)--------->AHL20(2)   --------->AHL20(2)        <-------MYC3 -->TEIL <---------YAB1 <---------DEAR3(2)<---------AHL20(2)--------->YAB1               ------->MYC3 ---->ARR14(2)    ---------->DOF2----------->GT1    --------->AHL20(2)      <---------ANAC46 <-------   tccacgtgattgtgaatgaacaaaggcggtaggtaaggtagtaaataattgacattaaacactaatattataaccttctcgtgtacaaaaacgtggggtt  8031200                --------->AHL20(2)                <---------AHL20(2)       ----------->GT1  ----------->TBP --------->AHL20(1)                                                    *TSS <---------AHL20(1) <---------AHL20(2)                          ------>ZmHOX2a(1) ---------------AGL15                --------->HSFB2a(2)      ------>ZmHOX2a(2) ----------------AGL3                <---------HSFB2a(2)    <---------ARR11(3)               -------- --->GT1    <-----------TBP--------->ANAC58                 --------->ARR11(3)          <---------AHL20(2) --ANAC46 <-----------TBP  --------->ANAC58               <---------YAB1               --------->AHL20(2)   taatatatatggatatatataatttatgcaggccctggtccagagcatcatatgctagttatgatcctatctacttattctgtagattataaaatagcag  8031300                                                                                   <-------TEIL                                                                       --------->ARR11(3)                                                           --------->ARR11(3)     --------->CCA1(2)                                                           --------->GLK1(2)     --------->ARR14(2)                                                           <---------ARR11(3)    --------->ARR11(3)                                                          --------->RVE1(1)      <---------ARR14(2)                                                          --------->CCA1(1)      <---------ARR11(3)          --------->YAB1                                --------->AHL20(2)<----------DOF2  <---------AtLEC2                                ----------->GT1      <---------ARR11(3) ->At4g35610          <-----------GT1            >>>>>>>>>TBF1     ---------->DOF2<------ZmHOX2a(2)   acttgcatagaaacataacatgtattacaaacttgtttagtcaaacttgaagaagaaaaaaaatctttttaaagagctttgaagatccatggcgatgtct  8031400                                                          <------NtERF2                                                         ------>NtERF2                                                        --------->bZIP60(1)                                                        <---------PCF2                                                        <---------bZIP60(1)                                                       --------->RAP2.3(1)                                                      <---------ATERF1(1)                                                     --------->ALFIN1                                                     <---------DEAR3(1)                                                   <---------AtLEC2                     --------->GLK1(2)                            <-----------GT1        <---------ANAC58           ----------->RAV1(1)                         <---------CCA1(2)         <---------ANAC58           ------>NtERF2                       --------->TOE1(1)           <---------ANAC46          --------->ANAC46                       --------->TOE2(1)       <----------DOF2              --------->ZAT18                      ------>ZmHOX2a(1)   --------->RAP2.6(3)               <---------ZAT18                   ------>ZmHOX2a(1)     --------->MYB52(1)            --------->ARR14(2)               <---------ALFIN1         <-----------GT1<------NtERF2   <---------ARR14(2)   catgtccagcctatgctactcctcctcgtatcactcttcttcttaccggctttgcgtggcgccatagatttcgaatactgcgccagtaagtatctatttg  8031500                                                                                             <-------                         <---------YAB1                                                      <-------                      <---------YAB1                      <---------YAB1                -------------             <---------DAG2    <---------ANAC58         --------->YAB1                 --------->GLK1(2)             <----------DOF2   <---------ANAC58     --------->AHL20(2)                <---------GLK1(2)         <---------MYB52(1)    <---------ANAC46<---------YAB1          --------->ARR11(3)    <-------   ttaagtcttcagttacttttctatatgatttttgtgtgtttattagtttataaatgaattataaattcagatagaccttgatttcatagattctggcttg  8031600                                                                                     --------->LBD16                                                                                    <---------LBD16                                                                                    <---------ANAC46                                                                                   <---------LBD16                                                                                  -------->P                                                                                  ------>MYB46(1)                                                                                  --------->MYB52(1)                                                                                  ------>MYB83                                                                                 --------->MYB55(1)                                                                                <---------MYB46(2)                                                                                <---------MYB59                                                                             <-----------GT1                                                                            <-----------GT1    <----- --ANAC46           <----------DOF2                                    <---------AHL20(2)      <----- --ANAC58       ---------->ID1                                        --------->AHL20(2)    --------- ---------->TaNAC69(2)                         ----------->HVH21      <---------AHL20(1)    --------- --ANAC58<---------MYB52(1)                  <----------DOF2          <---------AHL20(2)------>NtERF2   ctcatggctctgttttttgtttcttttagtaaaccaatatttgaactctttgacatttgaattggattccaattttttttaacctaccggggactcgtaa  8031700                                                          <-----------HVH21                                                          <-----------TGA1                                                   --------->ANAC46                                                   <---------ANAC55(2)                                 --------------->AGL15  <------------AtMYB77                                <-----------------AGL1  --------->DEAR3(2)                                <---------HSFB2a(2)--------->ANAC58                            <-------GAMYB          --------->ANAC55(2)                          -----                           <-----------RAV1(1)     --------->ANAC55(1)                          -----                           <---------MYB46(3)      --------->ANAC58                             ----- ----TOE1(2)       --------->CCA1(2)              <---------LBD16                            <------NtERF2 ----TOE2(2)   --------->AHL20(2)<---------------AGL15  --------->MYB46(3)            <---------MYB52(1) >ANAC58      <---------AHL20(2)----------------->AGL1--------->ARR14(2)            <-----------RAV1(1) >ANAC58      --------->AHL20(2)<-----------------AGL3<---------ARR14(2)            <---------MYB46(3)   gttatagcttccacaattaatatatgcgactgttgcagaaaatggaaacgattacggaaccgtcactagcattgtggtctctccatctgttgggcctcac  8031800  Previous    Next  AGI:  At5g23810.1    Description:  AAP7 (amino acid permease 7); amino acid transmembrane transporter. similar to AAP3 (amino acid permease 3), amino acid transmembrane transporter [Arabidopsis thaliana] (TAIR:AT1G77380.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45205.1); contains InterPro domain Amino acid transporter, transmembrane (InterPro:IPR013057) Range:  from: 8028381    to: 8030819    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g23820.1    Description:  MD-2-related lipid recognition domain-containing protein / ML domain-containing protein. similar to MD-2-related lipid recognition domain-containing protein / ML domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G23840.1); contains InterPro domain MD-2-related lipid-recognition (InterPro:IPR003172) Range:  from: 8031271    to: 8033023    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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