Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                             ----------                                                                                           <---------                                        --------->YAB1                                    <----------                                  --------->ANAC46                                        -----------                                  --------->ANAC58                                        -----------                               ----------->TGA1                                           <----------                            --------->GLK1(2)                                             <----------                           --------->ARR11(3)                                            --------->At4g35610    <-----------HVH21      <---------GLK1(2)                                         --------->TOE2(3)   <----------ID1          <---------ARR11(3)                                        <----------DOF2   ----------->GT1         <---------ARR14(2)                                  --------->ANAC55(2)  --------->DAG2           --------->ARR14(2)                                  --------->ANAC46   --- --------->DAG2    <---------ARR11(3)  <---------ATHB51                      <-----------GT1      --- --------->DOF2   --------->ZAT2  --------->ANAC58                    <---------MYB52(1) <---------At4g35610   caaaaaggtcaaataatccaagctctcaagattctgacgcaattatactacaatcgagctagatttcataccgattgtttcacataactttagctaaaaa  8013800                                                                               ----------->GT1                                                                              --------->DAG2                                                                              <---------------AtSPL8 ----->AGL15                                                                  --------------->AtSPL8 ------AGL15                                                           --------->GLK1(2) -------AGL2                        <---------WOX13(1)                 <---------ARR11(3) ------>AGL2              --------->At4g35610                         --------->RVE1(1) ------>AGL3           --------->ZAT2                             ------>ZmHOX2a(1) -------AGL3           --------->At4g35610 <----------DOF2       --------->TOE2(3) -------AG----------->GT1 <---------At4g35610  <----------DOF2--------->ARR14(2)       --------->YAB1 -------->GT1         --------->ANAC46     ------>ZmHOX2a(1)  <---------ARR14(2)      <---------ATHB51 ------>YAB1          ----------->RAV1(1)<---------ICU4  <-----------GT1     ---------->DOF2   tggtaatttagtgagtgaaaacaccagcagcaaacttgattaatcctttctttttgttttttcaaatcctaaaaatctgaaaagtacaataataaacaga  8013900                                                                                 --------->At4g35610                                                                                 <---------ZAT2                                                                                 <---------At4g35610                                                                           <---------At4g35610                                                                           --------->ZAT2                                                                      <---------GLK1(1)                                                                      --------->GLK1(1)                             ---------->DOF2                          --------->CCA1(2)                         ----------->GT1                             <---------ARR11(3)                     --------->DAG2                             --------->DEAR3(1)          <--------                    ---------->DOF2                       --------->YAB1   <---------ZAT2  <---------ANAC58                 --------->YAB1                           <---------ICU4   ----------->RAV1(2)                <---------ATHB12                         --------->ICU4    --------->At4g35610   <---              --------->WOX13(1)  ---------->DOF2 <------ZmHOX2a(1)  --------->ARR11(3)    <---------ANAC58   aacaagaattgaaattcaatcaaaaagtagttaaagaaaagaagaagtagtaggaagaaataatcaccgaagatatcagctgcagcttctatggctttct  8014000                                                  ----------->GT1                           ---------                                                ---------->DOF2                  --------->YAB1                                            --------------->AGL15               <---------ATHB12                                            <---------HSFB2a(2)               --------->WOX13(1)                   ----------->GT1          --------->HSFB2a(2)             <------ZmHOX2a(2)                  <---------YAB1            <---------------AGL15          --------->ARR11(3)                  --------->ICU4        <----------DOF2                    <---------ARR11(3)             --------->WOX13(1)      <---------ALFIN1                ==============HOX2a_HOX2a         --------->YAB1          --------->At4g35610                 <------ZmHOX2a(1)      --------- --DOF2 <---------YAB1      --------->TOE1(3)  --------->YAB1     =================HOX2a_HOX2a ------At4g35610--------->YAB1   <---------At4g35610              <------ZmHOX2a(1)         <--------   gcttcgtcttatcatcagtcatggttaaaaccttcagcaccactttctataaaagtaaaaccaatttaggaggaagagatcaatcatattcaaactttaa  8014100                                         =======================HOX2a_HOX2a                                         ------>ZmHOX2a(2)                                        ========================HOX2a_HOX2a                                        <------ZmHOX2a(2)                                       --------->ARR11(3)                                       <---------ARR14(2)                                   --------->HSFB2a(2)                  ----------->GT1                                 ----------->RAV1(2)                   <---------HSFB2a(2)                               <---------ANAC58                        --------->HSFB2a(2)      ----------->GT1          <---------ANAC46                       ----------->GT1 >TOE1(3)           --------->TOE1(3)  <---------ARR11(3)            <------ZmHOX2a(2) >TOE2(3)          ----------->RAV1(2) --------->ARR14(2)<------ZmHOX2a(1) --DOF2     <----------ID1     <---------ANAC58          ===================HOX2a_HOX2a       <------   aatcaaatgagaaaaaaacaaacctgagccatttcgtctgggatcttggagaaataagaggaagagaagagatcgagaaaatatagagtttgatattttt  8014200                                                                   <------------CBF                                                                 >>>>>>>>>>>>WRKY18                <---------YAB1                               <---------WOX13(1)               <---------AHL20(2)                           <------------CBF                   <-----               <---------AHL20(1)                     --------->AHL20(2)                       ======               --------->AHL20(1)                     --------->AHL20(1)                      <------               --------->AHL20(2)                     <---------ARR11(3)                      <------           --------->YAB1                             <---------AHL20(1)                      <------          --------->ICU4                              --------->ARR11(3)                     <------NtERF2     ----------->GT1                                  <---------AHL20(2)                <---------AtMYB61    --------->DAG2                       --------->DAG2    --------->ATHB12             <-----------RAV1(1)   ---------->DOF2             *TSS     ---------->DOF2   <---------YAB1  ---------->DOF2  <---------RAP2.6(2) ---AHL20(2)  --------->YAB1 <---------KAN4(2) <------------CBF ------------>CBF  <---------ZAT6   ttttataaagcaaaaattataatttagtgggaataaacaaaaaaaagggtattgaatatattgattgacaattgacaaaagttagtgtttgtggtggctt  8014300                             ------------>CBF                        ------->TEIL                        <---------TOE1(2)                     <---------ANAC55(2)                     <---------ANAC46                     <---------ANAC58                     <---------TGA1a                     <---------ANAC55(1)                     <---------ANAC58                     <---------O2                     --------->ANAC55(2)      <------ZmHOX2a(1) <---------TOE2(2) -----DOF2        ----------->HVH21 ==============================bZIP_DOF     <---------At4g35610                  <---------TOE2(3) ---ANAC58       <-----------HVH21          --------->ZAT2                      ---------->DOF2 ---ANAC46      <---------ANAC55(2)         <---------ZAT2               <----------DOF2         <--- ---ANAC58     --------->TOE1(2)            --------->At4g35610          <---------DAG2         <----   ttggtagaggatgagaacatgtgacgtatgtttcaatgtaatggacagctctgctatactcttatacttcgcctactttttctaaagttgttttgttttt  8014400                                     <---------ANAC58                                     <---------ANAC58                                 <------MYB83                                 <---------MYB46(3)                                 <------MYB46(1)                                --------->MYB111(1)                                <---------AtMYB61                               <--------P                             --------->MYB55(2)          ---------->DOF2    <---------MYB46(3)                               <---------YAB1 --------GT1                --------->ALFIN1 <-----------GT1                --------->YAB1 -------GT1<---------------AtSPL8<---------DEAR3(2)                ---------->DOF2 --------->YAB1   atctcttcacttaaaagtactcagacacaagtggttggttcttgttttttcaagttaactaagctaagtcaaagctaaacatcattcatcatccatatag  8014500                                       --------->ARR14(2)                                       <---------GLK1(2)                                       <---------ARR14(2)                             <-------MYC3                               <-------GAMYB                                   --------->At4g35610                               <---------At4g35610                             <---------At4g35610                      <---------ZAT2--------->HSFB2a(2)         <---------MYB46(3)    ------->MYC3                      --------->At4g35610            --------->ANAC46      <---------ICU4              <---------At5g28300   <---------HSFB2a(2)         <-----------RAV1(1)<---------ALFIN1             <-----------GT1  <-----------RAV1(1)<-----------HVH21       --------->GLK1(2)          <        <----------DOF2 ----------->HVH21     --------->ANAC58<---------At4g35610 <---------ZAT18   - <-----------GT1      <---------At4g35610     --------->ANAC58<---------ZAT2<----------DOF2    <-----   attaaaccatcttttttaccatggagctgatgctgttgccagaaactcaagcttcacatcatcgagctgttggacaatctttgctgcacatgacttactt  8014600                                                       --------->MYB52(2)                                                       <---------MYB46(3)                                                     <---------MYB52(1)                                             --------->ARR11(3)                                             --------->GLK1(2)                                  <----                                            <---------GLK1(2)                               <--------                                     <---------ZAT2<---------ANAC46                    <-----------HVH21        <----------DOF2              --------->At4g35610         <----------DOF2    <---------At4g35610 ---------At4g35610                  --------->ZAT2<---------ANAC58          <----------DOF2<-------- -------->At4g35610            <----------DOF2     <---------ANAC58 <-----------GT1 --------->At4g35610 -----DOF2      <---------CCA1(2)    <---------At4g35610       <---------At4g35610  --------->ZAT14<-   tgagctatctctttgtccatctcttcatttagcctttgcagctcaagaatcttgcgtttgttctcagcttttacgctctctttctctgcggtcactttct  8014700  Previous    Next  AGI:  At5g23760.1    Description:  heavy-metal-associated domain-containing protein. similar to heavy-metal-associated domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G01490.2); similar to heavy-metal-associated domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G01490.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN70124.1); contains InterPro domain Heavy metal transport/detoxification protein; (InterPro:IPR006121) Range:  from: 8013088    to: 8014231    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g23770.1    Description:  agenet domain-containing protein. similar to agenet domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G23780.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN64022.1); contains InterPro domain Tudor-like, plant (InterPro:IPR014002); contains InterPro domain Protein of unknown function DUF724 (InterPro:IPR007930); contains InterPro domain Agenet; (InterPro:IPR008395) Range:  from: 8014516    to: 8016274    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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