Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                          ---------->DOF2                     --------->AHL20(2)                     --------->YAB1                    --------->ICU4                    <---------YAB1            ----------->GT1                --------->AHL20(2)          --------->AHL20(2)     <---------------AGL15              --------->AHL20(1)            <---------AHL20(2)     --------------->AGL15----------->GT1  <---------AHL20(2)      --------->AHL20(2)        <------MYB83 ------>AHL20(2)  --------->YAB1        <---------AHL20(1)         --------->AHL20(1)   <xxxxxxxxxxxx -------AHL20(2)  <---------ICU4--------->AHL20(2)                 <---------AHL20(2)  <---------AHL20(1) ----->AHL20(1)  <---------AHL20(2)  --------->AHL20(2)           --------->AHL20(2)   <---------AHL20(2) ------AHL20(1)  --------->AHL20(2)--------->AHL20(2) <---------AHL20(2)    ----------->GT1  <------MYB46(1) ----->AHL20(2)  --------->ICU4 <---------AHL20(2)   --------->AHL20(2)<---------AHL20(2)   --------- ------AHL20(2)  <---------ATHB51 --------->YAB1  <---------AtLEC2<---------AHL20(2)   --------->AHL20(2)   ttattttttaaaaatagaaataattataaagtattaaaataatatataatttgcataaaattttgaaaataatttatattgtaaaacaaaaaatttggtc  7997800                                  <---------AHL20(2)                                <---------AHL20(2)                               <---------AHL20(1)                 <---------AHL20(2)                        ---------->DOF2                          <---------AHL20(2)            ----------->GT1    <---------ARR11(3)                --------->AHL20(2)       <---------AHL20(2)      --------->ARR11(3)         <---------YAB1                           -- xxxxsmallRNA(i)    ---------->DOF2                  <---------ICU4                           ------- >MYB59--------->AHL20(2) ----------->GT1     <-----------GT1<---------YAB1               --------->AHL20(2)   caaaacaatttatattgtaaaacaaagaaagtatatatttttgattttttactaatatttatgcttattaattttcagaaataagttgacaaaaaaattc  7997900            --------->AHL20(2)            <---------AHL20(2)            --------->AHL20(1)       --------->AHL20(2)       <---------AHL20(2)       <---------AHL20(1)    --------->AHL20(1)                                    --------->AHL20(1)    <---------AHL20(1)                          --------->TOE2(3)   --------->ARR11(3)    --------->AHL20(2)    <----------DOF2       <----------DOF2     <---------ARR11(3)   <---------AHL20(2)     <---------DAG2 --------->TOE1(3)<---------AHL20(1) ------->AHL20(2)     <---------ZAT14    --------->TOE2(3)<---------ARR11(3)               <--------- -->GLK1(2) <---------AHL20(1)        <-----------GT1     --------->ARR11(3)              <---------TOE2(3)   tataaatattttattttattagactgaactttttcagattaaaccataaactttagtgaatattttttaaaatctaaaaccatttttgtataaatgttgt  7998000                                                                 --------->AHL20(2)                                                                 <---------AHL20(2)             <----                                                                --------->AHL20(1)             <-----                                                                <---------AHL20(1)          ---------                                                    --------->ANAC58                        <--------                                                    --------->ANAC58                        ---------                                                  --------->MYB52(1)                     --------->YAB1                                               --------->ANAC46 <---------AHL20(2)      <---------AHL20(2)                                             --------->ZAT6     --------->AHL20(2)<---------HSFB2a(2)                                        <---------ICU4     --------->AHL20(1)     ----------->GT1                                        --------->YAB1     --------->AHL20(2)     --------->HSFB2a(2)                    --------->AtLEC2   <---------AHL20(2)  <---------AHL20(2)  <---------ARR14(2) --RAV1(1)       <-------TEIL      --------->AHL20(2)----------->GT1           --------->ARR14(2)   <   tgatttcgaccgaaatagtttcatacaaaatatagttttaaataataacacaaaacggaaataaaataaaattagaagacagttctgtaaataataatat  7998100                                                          --------->AHL20(1)                                                          <---------AHL20(1)                                                          <---------AHL20(2)                                                       --------->YAB1                                                      <---------ATHB51      --------->ARR14(2)        <---------AHL20(2)                          --------->YAB1          <-----------GT1    <---------AHL20(2)                        <---------ICU4               --------->RVE1(1)    --------->AHL20(2) --------->YAB1        --------->ICU4                <---------GLK1(1) -----YAB1          <---------ICU4          <----------DOF2   <---------AHL20(2)      <----------DOF2 ----AHL20(1)       --------->YAB1      <---------GLK1(2) --------->AHL20(2)<---------ARR14(2) >YAB1  --------->AHL20(2)        --------->YAB1   <---------YAB1          --------->CCA1(1)    <---- -AHL20(2) --------->ARR11(3)--------->AHL20(2)   ------------>CBF      <---------AHL20(2)      ----- >AHL20(2)<---------CCA1(2)  <---------AHL20(2)  <-----------GT1       --------->AHL20(2)      ------ ---------AHL20(2) --------->ICU4--------->ICU4  --------->YAB1        <---------AHL20(2)    <-------   gtttatttttttaaatcttgaataatgagaataaaatgatcagagtctttattacaataataaatttatgaaattaaatatccgtcttctttcttcgtcc  7998200                                                    --------->ZAT2                                                    <---------ZAT2                   --------->ARR11(3)               <---------At4g35610                   <---------ARR11(3)               --------->At4g35610               ---------->DOF2                   ---------->DOF2    <-------TEIL<---------TOE2(3)              <-------TEIL -----ETT(1)  --------->AHL20(2)              --------->CCA1(2)                      <---------AHL20(2) ------>HVH21 <---------AHL20(2)             <---------ARR14(2)         --------->ARR11(3)     ------ --->SPL7 <---------AHL20(2)        ------>ZmHOX2a(1) ----------->HVH21 <---------ARR11(3)     ------ --SPL7   --------->AHL20(2)     *TSS        --------->ARR14(2)     ---------->DOF2  --------->AHL20(2)   gacaagttcatattaattaaagataccttgagactttcctcttctcagatacaaagctgacatttgaagaaaaagacatttctaaaattaaacagaacct  7998300                                                                                               <-----                                                                                              <------                                                                                              -------                                                                                            <--------HAHB4                                                                                            <--------                  --------->TOE1(2)                                                        <---------YAB1                  --------->TOE2(2)                         ------>ZmHOX2a(1)              <---------ATHB12               --------->ARR14(2)                          --------->TOE2(3)     <---------AHL20(2)               <---------ARR14(2)                      --------->YAB1            --------->AHL20(2)              --------->ATERF1(1)                --------->ANAC55(2)            --------->AHL20(2)              <------NtERF2                      --------->ANAC58               --------->AHL20(1)            <---------ANAC46          <---------ATHB12 <---------ICU4    ----------->RAV1(1)---------           <---------LBD16        =================================HOX2a_HOX2a  <---------AHL20(2) <----------DOF2 ----------->RAV1(2) -------->P  --------->ANAC58  <-----------GT1--------->YAB1  <-- --->TOE2(3)<---------ANAC58      <------ZmHOX2a(2)   <---------ATHB12--------->ANAC46   --------->WOX13(1) --->TOE1(2)<---------ANAC58     <---------ARR11(3)   --------->ICU4<-----------GT1   --------->GLK1(2)   aagcttttgcaatggcggaacctgagaagaagcgagatcaaccattttctcaagtaatcatccttcatttttcccccacaaatttaataatctatcatta  7998400                    --------->ATHB12                    <---------ICU4                    --------->YAB1                   --------->ICU4     ------>NtERF2 <---------YAB1    <---------ALFIN1<--------HAHB4                                      <---------YAB1 --------->ANAC46--------->YAB1                                    <------------------------ANAC81 ----ICU4       <-------TEIL                                      <---------YAB1     <---------DAG2 ---YAB1     <---------ANAC58                                 --------->ARR14(2)     <----------DOF2 -->ICU4     <---------ANAC58                                 --------->ARR11(3)    <---------DAG2 -ICU4  <----------DOF2             <-----------GT1           <---------GLK1(2)<-----------GT1   ==== >YAB1 <---------DAG2        <---------ALFIN1  <----------DOF2<---------ARR14(2)---------->ID1   ---- ---------GT1<---------ANAC46----------->RAV1(1)              <---------ARR11(3)<-----------GT1 <----   tcacccccaccttttgcgttcatcattacccccacatttatctctccctcttttcgcagagccagattttgattttgattttttcccctttttctctgat  7998500                       ---------->DOF2                    ===========================HOX2a_HOX2a                             <---------MYB52(1)                    ============================HOX2a_HOX2a                           <-----------TGA1                    <------ZmHOX2a(1)    ------>ZmHOX2a(2)                            <-----------HVH21                   --------->ANAC58     <------ZmHOX2a(2)                            --------->ANAC46      <-----------RAV1(1)<----------ID1--------->ARR11(3)                            --------->DEAR3(1)   <---------YAB1  --------->ANAC58    <---------ARR11(3)                          <---------At5g28300 ==========================HOX2a_HOX2a --------->AGP1                            ----------->HVH21 -->ZmHOX2a(2)    <---------TOE1(2)    <---------AGP1                          ------>ZmHOX2a(1) ---- -----At4g35610   <---------TOE2(2)---------->DOF2     --------->ANAC46  ------>ZmHOX2a(1)     <-----   ctgatattatggtgctatcgcaggaaaaagacgaagagaaagatctataccttgttcacgacgagcacgagtctcctcttcctctcaccgtcacttctcg  7998600                           <---------TOE2(3)                           <---------TOE1(3) --------->YAB1                    <-------TEIL           <---------AHL20(2)               ------>ZmHOX2a(1)           --------->AHL20(2)              --------->TOE2(3)           --------->YAB1           <---------ARR14(2)       ----------->GT1                                   <---------TOE1(2) ------->GT1<------ZmHOX2a(2)      <---------TOE2(3)                        --------->HSFB2a(2) ----ANAC46--------->ARR14(2)      <---------TOE1(3)                     <----------DOF2   ----------   tgtaaatttctccgatcctaaattcgttttaggttttagggttatattaatagtctcgtcttaaaaattggaagacttttggaatttgcaggttttgtac  7998700  Previous    Next  AGI:  At5g23720.1    Description:  PHS1 (PROPYZAMIDE-HYPERSENSITIVE 1); protein tyrosine/serine/threonine phosphatase. similar to dual specificity protein phosphatase (DsPTP1) [Arabidopsis thaliana] (TAIR:AT3G23610.2); similar to hypothetical protein OsI_001558 [Oryza sativa (indica cultivar-group)] (GB:EAY73711.1); similar to hypothetical protein OsJ_001619 [Oryza sativa (japonica cultivar-group)] (GB:EAZ11794.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68375.1); contains InterPro domain Zinc finger, C2H2-like; (InterPro:IPR015880); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Protein-tyrosine phosphatase, dual Range:  from: 7998233    to: 8002843    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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