Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                             --------->ANAC46                                                                                   --------->ZAT18                                     ----------->GT1                              --------->ANAC58                                  --------->ANAC46                                --------->ANAC58                                <---------ALFIN1                                ------>MYB83                            --------->DEAR3(1)                                  ------>MYB46(1)                           --------->ANAC58                                   --------->MYB46(3)                           --------->ANAC46                                   <---------MYB55(2)    -                           --------->ANAC58             --------->ARR11(3) --------->AtMYB61        <                          <---------LBD16   --------->ANAC58         ---------->DOF2       --------->ANAC58                      <<<<<<<<<<GATA-1      --------->ANAC58     --------->At4g35610   --------->AtLEC2                     --------->GLK1(1)    ---------->DOF2     ---------->DOF2 ---------->DOF2-------- ---GT1              <---------GLK1(1) <---------ZAT6   <-----------------------TaNAC69(2) --------->ANAC58   tgctaaactggacaaaacacttgaaatccacggaccacgtagtgaaaagcaagactaagatgtggaaagcagaaagaccaccaagcgcaatgcaagcatc  7967500                                                                           --------->ANAC58                                                                           <---------ALFIN1                            --------->WOX13(1)                             --------->ANAC58                           <---------WRKY38(1)                             --------->REM1(1)                          --------->WRKY18(1)                              --------->ANAC46                     --------->YAB1                                      ----------->RAV1(1)                     ------>ZmHOX2a(2)                                   <---------ALFIN1                    <------ZmHOX2a(2)                                    --------->DEAR3(1)                 --------->HSFB2a(1)         --------->ARR14(2)       ------->GAMYB                 <---------HSFC1(2)          <---------GLK1(2)        --------->ANAC46                 <---------HSFB2a(1)         <---------ARR14(2)       --------->ANAC58              <------ZmHOX2a(1)           --------->ANAC46            --------->ANAC58              =============HOX2a_HOX2a --------->ZAT14               --------->MYB46(3) -------->ZAT14  --------->MYB46(3)    <---------ZAT14            ---------->DOF2                 --- ---------ZAT14 <---------KAN4(2)      --------->ARR14(2)   <---------ALFIN1                   ------ ->YAB1       ==============HOX2a_HOX2a<---------ARR14(2)   --------->MYB52(1)              ------>ZmHOX2a(1)   actgaagtctatgctaggaacgatcgtagtcaaccatacagtatacagaatcgcaaatggccaaacgtccaagcgccacaccaattgtttcttcctacat  7967600                              --------->ANAC58                              --------->ANAC46                          ----------->RAV1(1)   ------->TEIL           <---------ALFIN1   -------->P          ------>ZmHOX2a(1)                                         <-------TEIL <------  <-----------GT1 <----------DOF2                                          ------>ZmHOX2a(1)  <------ ------>WOX13(1) <---------DAG2 ---------->DOF2                           --------->TOE2(3)   <------ --->TOE2(3)  <---------ALFIN1--------->ANAC58                            --------->TOE1(3)<---------ARR14(2)   aaatcaaccttctccactacctttcctcccacacgaaagctcgacatttcaaaaaaaaaaaaaaaaaactagttctccttaaattcgtctgaagttcctt  7967700              <---------DOF5.7(2)     --------->ANAC46    <---------ZAT18                       --------->MYB52(1)    <---------ZAT14                  --------->TOE2(3)                 <---------HSFC1(2)<<<<<<<<<ARR2    --------->ZAT14                --------->ARR11(3)                  <---------HSFB2a(1)--------->YAB1    --------->ZAT18                <---------ARR11(3)                  --------->HSFC1(2)<<<<<<<<<ARR1 ---ANAC58   <-------TEIL         <---------GLK1(2)          --------->DAG2         ------>ZmHOX2a(1) ---ANAC46  --------->DOF5.7(2)--------->YAB1----------->GT1---------->DOF2     <---------ARR11(3) ---ANAC58 --------->TOE1(3)  <---------ATHB12      <---------ATHB12   --------->HSFB2a(1)-----------   gagttctgcacaacgttcacgactaagaacaaatcaaaatctcaaaacggttcaatgaaacaaaaagctaagaaaattccaagttcctacaatcgtaatt  7967800                               <------ZmHOX2a(1)                             --------->ALFIN1                            <------ZmHOX2a(1)                          <---------TOE2(3)                       ===============HOX2a_HOX2a                       ------>ZmHOX2a(2)                      --------->CCA1(2)                      ================HOX2a_HOX2a                      =============HOX2a_HOX2a                      <------ZmHOX2a(2)                     <---------ARR14(2)                     --------->AGP1                     <-----------ARR10          --------->TOE1(3)<---------ANAC58                     --------->ARR11(3)         --------->TOE2(3)<---------ANAC46                     --------->ARR14(2)       ------->TEIL       <---------ANAC58           <--------   --------->ARR11(3)<---------ARR11(3)  --------->CCA1(2) ==============================HOX2a_HOX2a   <---------ARR11(3)<---------AGP1 ---------->DOF2        <------ZmHOX2a(1)      <------ZmHOX2a(2) >GT1               <---------CCA1(2)   <----------ID1 --------->ICU4            <---------ARR11(3)   caaaagatttcaattcagaagcagatctaaggaggagggaaagagacgaaccttgaaattaggagtagcttggaattgagagagatcaaaaactagggtt  7967900                                                                             <------------CBF                        <---------At5g28300                        --------->ANAC46                        <---------LBD16                            --------->O2                       --------->MYB52(1)                          --------->TGA1a                 <------ZmHOX2a(2)               *TSS<----------DOF2        --------->ATHB12                --------->ARR11(3)         --------->GLK1(2)       --------->ANAC58                <---------ARR11(3)        <---------GLK1(2)        --------->ANAC58        --------->TOE1(2)            ---------->DOF2 ========================bZIP_DOF           <---- -TOE2(3)--------->AtLEC2            ========================================bZIP_DOF           -----   ttcaaattgacatgcgaagatcgaatcacggcgaaacccaaaaggaatctctctccttttgttcgtctcacgactccacgattgaatcggcttagtttag  7968000                                                                                    --------->YAB1                                                                                <---------AHL20(2)                                 <---------------AGL15     <-----------GT1     <---------YAB1    ----                      <---------HSFB2a(2)         <---------YAB1       --------->YAB1  <-----------GT1       --------->At4g35610       --------------->AGL15  <-----------GT1--------->TOE1(3)  <---------DAG2 -----At4g35610       --------->HSFB2a(2)      <---------AHL20(2)      --------->TOE2(3)  --------->TOE2(3) ---->At4g35610    <----------DOF2      ----------->GT1<---------AHL20(2)    <---------ICU4    <-----   ctctctagccgcttcggttttcttttcgaagacttctatattttgttaatttatgattttatcacatctctaatcttaatttttatttataaccttttta  7968100                                                                  --------->YAB1         <---------AHL20(2)              --------->DAG2                                     --------->AHL20(2)     <---------AHL20(2)             ---------->DOF2                             <------NtERF2              <---------CCA1(1)          --------->YAB1                                 --------->ATERF1(1)        <---------RVE1(1)       --------->YAB1                                   <---------SPL7             <---------ARR11(3) ----->ANAC55(2)    <-----------GT1                    <---------ANAC58            --------->ARR11(3) ------GT1--------->AHL20(2)     <---------AHL20(2)    <---------ANAC58          <---------TOE2(3)   cttatctattaataaaaaagttttacttcttccatttttttgtctgggtttatatgggcgtagcccattaataagagaagtttgagattttttatttttt  7968200                                                                     <---------RAP2.6(3)                                                                  <---------PCF2                                                                --------->ZAT18                                                               --------->ALFIN1                                                             <---------O2                         ---                                                             ========================================bZIP_DOF                                                             --------->TGA1a        --------->ETT(2)                                      <---------WOX13(1)     <---------TGA1a        <---------ETT(2)                   <----------DOF2 <---------YAB1            ========================================bZIP_DOF         <---------LBD16        <---------TOE2(3)            --------->O2<---------LBD16  ---------->DOF2   gtctgcatttatacgggcagactttaatcccattaatgtgatagattagaagttgaacttctcaagtgggccgtcttcggagattgtcgacaataagcga  7968300               <------MYB83               <------MYB46(1)           <---------ANAC58                      ----------->HVH21      <----------DOF2       <------           <---------ANAC46                  <---------ALFIN1     --------->ARR14(2)          -------           <---------ANAC58             --------->ANAC58          --------->GLK1(2)          --------       <---------ANAC46                 --------->ANAC58   --------->KAN4(2)          ----------->GT1       <---------ANAC58               ---------->DOF2     <---------KAN4(1)         <---------ANAC58       <---------ANAC58          --------->ARR14(2)       --------->KAN4(1)       <---------ARR14(2)  <---------ANAC58               --------->GLK1(2)       <---------KAN4(2)        --------->ARR14(2)  <---------ANAC58               <---------ARR14(2)    --------->LBD16--------->At4g35610    -------- ------->DOF2<--------P       --------->ANAC46   --------->ANAC46 <---------ARR14(2)<---------ANAC58   gaaagcgtgtcttgggtaggcctgggcaatacccgaatccaaaagccaaacccgacccgaataatccgaatccgctctacttcggttcttgtaaaatatc  7968400  Previous    Next  AGI:  At5g23630.1    Description:  (MALE GAMETOGENESIS IMPAIRED ANTHERS); cation-transporting ATPase. Identical to Putative cation-transporting ATPase [Arabidopsis Thaliana] (GB:Q9LT02); similar to ACA2 (CALCIUM ATPASE 2), calmodulin binding [Arabidopsis thaliana] (TAIR:AT4G37640.1); similar to hypothetical protein CHLREDRAFT_60708 [Chlamydomonas reinhardtii] (GB:XP_001703596.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67113.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ82066.1); contains InterPro domain Haloacid dehalogenase-like hydrolase; (InterPro:IPR005834); contains InterPro domain P-type ATPase of unknown pump specific Range:  from: 7960481    to: 7967949    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g23640.1    Description:  unknown protein Range:  from: 7968262    to: 7968505    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version