Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                 ----------->RAV1(1)                            ----------->RAV1(1)                           ----------->HVH21                           --------->ANAC46                         --------->ANAC46                         --------->O2                         <---------O2                         --------->ANAC58                          <------ZmHOX2a(2)          ----------->GT1--------->ANAC58                         <---------ARR11(3)   <---------ANAC46      --------->ANAC55(2)                      --------->ARR11(3)  --------->ATHB12 ------>NtERF2          <---------LBD16                   --------->ZAT2--------->HSFB2a(2) --------->LBD16       <-----------GT1        ----------->GT1    <------ZmHOX2a(1)   --------->ICU4 --------LBD16   --------->AHL20(2)       ---------->DOF2 <---------ZAT2<---------HSFB2a(2)   ttccggcgttttctgtaaaaaaaattcacgcgacaacaaaaacaaaaagagtcaaaatcgagctcgaggatcacctagaaactagaaatgatttgaagaa  7959900                                                                                                    -                                                                                                    <                                                                                                    -                                                                                                   <-                                                                                                   --                                                                                                   --                                                                                                  <--                                                                                                  <--                                                                <------NtERF2                     <--                                                               ------>NtERF2                      <--                                                               ----------->RAV1(1)                ---                                                              ----------->HVH21                  ----                                                             <------NtERF2                       <---                                    <------NtERF2            --------->ATERF1(1)                 <---                                    --------->ZAT2           --------->RAP2.3(1)                 <---                                  <---------RAP2.6(2)       <---------ATERF1(1)       --------->ZAT18                                  <---------ANAC46         <---------DEAR3(1)   --------->DEAR3(1)<--                                 <---------LBD16          <------ZmHOX2a(1)    --------->ANAC46  <---                                ------>ZmHOX2a(2)       --------->ALFIN1       --------->ANAC58  <---       ---------->DOF2          =================================HOX2a_HOX2a   <---------------------WRI1     ==================================HOX2a_HOX2a--------->HSFB2a(2)          --------->ANAC58 <----     <------ZmHOX2a(1) <---------GLK1(2)          <---------HSFB2a(2)    <-----------GT1        -----    <----------ID1--------->MYB52(1)<---------ZAT2<---------LBD16       <-----------GT1--------->ZAT6   attaagaggaaaagaaaactcaacagattatagatcgcggctagggttttttctcggagaggaggcgacattttttaacacaccgaagaacactaagagg  7960000      <---------ANAC58      <---------ANAC58     <------NtERF2    ------>NtERF2   <---------DEAR3(1)   --------->DEAR3(1)  --------->ATERF1(1)  <------NtERF2 <---------ATERF1(1) ------>NtERF2 -------->DEAR3(1) ---------DEAR3(1) ---------->HVH21 -----NtERF2 ------->ATERF1(1) ------->RAP2.3(1) -------RAP2.3(1) -------ORA47(2) -------ATERF1(1)                                        ------>ZmHOX2a(2) -------ERF1                                            <------ZmHOX2a(2) --->NtERF2                                            --------->ARR14(2) ----->ATERF1(2)                                       <---------ARR14(2) ------RAP2.6(2)                                    <---------ANAC55(2) ------ANAC46                                  --------->DAG2 ------RAP2.3(2)                              ---------->DOF2 -------DEAR4(2)                             <--------------OsCBT ------RAP2.3(3)                    ------>NtERF2   --------->ANAC58 ------DEAR3(1)                    --------->ANAC58 --------->ANAC58 -----ABI4(1)                      --------->ANAC46 --------->ANAC46                       --------->TOE1(2) ---->ATERF1(1)                    --------->ANAC58<---------LBD16                 ----------->GT1   cggcgacggcgtaactcttctcacagcatcaaaatcgacgccatcgaaaaaagcacggatcgcgattgaaattggaaacagaaaatggtaaaacctagaa  7960100                   --------->LBD16                 <------NtERF2                ------>NtERF2               --------->DEAR3(1)               <---------ALFIN1               ------------------>SPL14                                                    <---------ETT(2)              --------->ERF1                                                               ----------              <---------ABI4(2)                                                            --------->ETT(2)              --------->ATERF1(1)                             <---------ZAT14            ------>NtERF2             <---------ATERF1(1)                  ---------->DOF2                       <---------SPL7            --------->ANAC58           >>>>>>>>>TBF1          --------->ZAT18           --------->ZAT18            --------->ANAC58           <---------------------WRI1                     --------->At4g35610           <---------ZAT18<---------LBD16     <----------ID1  --------->ZAT14      ---------->DOF2      <------ZmHOX2a(2) <---------ARR14(2)   ------------------------>ANAC81    ---------->DOF2     <-----------HVH21  --------->GLK1(2) >>>>>>>>>TBF1     --------->ZAT18----------->GT1--------->SPL7   atttagggatcagagcgccaccgtagaatcgggatagagaagaagaagaagacaaagacgagagcgcagagagggaaatggaaaaagaagcggacgacgg  7960200                                                                                              <------                                                                                          <---------ICU4                                                                                          --------->AHL20(2)                                                                                         --------->ICU4                                                                                    ----------->GT1                                <------NtERF2                                    <------------CBF                               ------>NtERF2                                  <-------GAMYB  <-------                               --------->LBD16                               --------------->AGL15                               <---------RAP2.6(3)                          ----------------->AGL2                              --------->ANAC46                              <-----------------AGL1                              --------->RAP2.6(2)                           ----------------->AG                              --------->RAP2.3(2)                           <-----------------AGL3                              --------->RAP2.3(3)                           ---------->ID1<---------AHL20(2)                              --------->DEAR3(1)                            <-----------------AGL2                             --------->ERF1                                 ----------------->AGL1                             --------->RAP2.3(1)                            <-----------------AG                         ---------->DOF2                                   *TSS --------->ATHB12<----                     <-----------------------TaNAC69(2)         <----------DOF2<---------MYB52(1)                    <---------ZAT18                             <---------DAG2<---------RAP2.6(3) ->HVH21            --------->ZAT18                            <---------DAG2<---------------AGL15<--   gagtagagagagactgagagagagccctaaagccgccaaaatccctaaattcttctcttcttcccccttttcaattttgccgttattggtaattttttct  7960300                                                                  --------->WOX13(1)                                                                ------------>CBF                                                                --------->WRKY18(1)                                                             --------->ALFIN1                                                            <-------MYC3                                                           <---------O2                                                           <---------ANAC58                                                           <---------ANAC58                                                           <---------ANAC46         <----------DOF2                                 =================================MYC_MYB      <-----------GT1                                    --------->TGA1a      ---------->ID1                                     <---------O2                     <---------DAG2     <-----------GT1                                     <---------TGA1a              --------->WRKY12 <----------DOF2                   --------->ZAT14    ----------->HVH21               --------->WRKY38(1) <---------DAG2                --------->ATHB12       --------->DEAR3(1)              --------->ETT(2) ------------------ANAC81     <---------YAB1          --------->At1g77200             <---------ETT(2) ----GT1 <---------DAG2     --------->YAB1           --------->DEAR3(2)               --------->DEAR3(1) ------DOF2              --------->YAB1   --------->MYB46(3)------->MYC3         <---------At5g28300 ---------GT1         <---------TOE1(2)   ------------>CBF------>NtERF2          -------->P   <------   ttacttttttcctttttcaactcgcatgaataatcagtggagaaaccaatgttacaccgacgcgtggtcaatctcttgaaatctaccgtcgaccttatca  7960400                                                                         <---------ANAC55(2)                                                                       <---------GLK1(1)                                                                       --------->GLK1(1)                                                                       --------->CCA1(2)                                                                      <---------ARR14(2)                                                                      <---------GLK1(2)                                                                      --------->ARR14(2)                                                                   --------->ANAC58                                                                   --------->ANAC58                                                                  <---------LBD16                   <---------ANAC46                          <----------DOF2                 <---------ARR14(2)        <------------------------ANAC81 --------->ANAC46                 --------->ARR14(2)    <----------DOF2   <---------At4g35610     --------->AHL20(2)             <-----------GT1   <---------At4g35610--------->ANAC55(2) ---YAB1 <-----------GT1   <------ZmHOX2a(1)    ---------->ID1   <---------AtLEC2   <-----------GT1   cagaagattatttacaacgtttctggtgaggatgagatttacttttgtttgtcgtcttctgctctttgcacggatacgcgttatattaagcgttctatat  7960500                             ------->GAMYB            ---------->DOF2                           -----                            <---------MYB52(2)    <---------ICU4                               ------                            --------->ANAC58      -------->HAHB4                               ------                          --------->MYB52(1)      --------->YAB1                               <-----                       --------->ANAC58          <---------ATHB51                        ------------                       --------->ANAC58          --------->ICU4                          <-----------                       --------->ANAC46          <---------ATHB12                       <------------                 ---------->DOF2     --------->YAB1 <---------YAB1      <---------MYB46(3)     <-----             ---------->DOF2--------->ANAC58   --------->YAB1<---------MYB52(1)    ----------->GT1   tagcccatagttatacaaagaaagtaagcaacgaaacaattacaaagactaataatgaaagcccttagatttagtggttcttagagagtgacaaaataag  7960600                                                                                       <---------ARR11(3)                                                                           --------->LBD16                                                                         ------>ZmHOX2a(2)                                                                        <------ZmHOX2a(2) ------>GT1                                                            --------->ARR14(3) --->MYB59                                                             <---------ARR14(3) --->DAG2                                                              --------->ARR11(3) ----TOE2(3)                                                           <---------ARR14(2) --->AGL15                                                             --------->ARR14(2)     ------- ----AGL15                                                 <---------HSFB2a(2)         --------->ARR11(3) -----AGL1                                                 --------->HSFB2a(2)       ------->TEIL---- ----TOE1(3)           ----------->GT1                 <----------DOF2 <---------ARR11(3) <----------DOF2   gtaatgagacaatatgggagacctatgggaaaaatgctcatgtttttttttttgaagctttctggcaaaacaagatccccaaaaacgaacatctttctcg  7960700                             --------->TOE1(3)                             --------->TOE2(3)                          <-----------GT1                       <---------ICU4                                                       <--------                    <---------ICU4                                                          ---------                   <---------YAB1     -------->P                                --------->CCA1(2)                   --------->ICU4  --------->AtMYB61                            --------->GLK1(1)                  <---------TOE2(3)<---------MYB111(1)                         --------->ARR14(2)   <   <---------AHL20(2) --------->ICU4 ------>MYB46(1)                           <---------GLK1(2)    <   --------->AHL20(2) <---------YAB1 ------>MYB83                    <<<<<<<<<TBF1     ----------->HVH21 -->HSFB2a(2)    --------->YAB1    <---------MYB46(2)             <<<<<<<<<TBF1<---------ARR14(2)   < ------->GT1   <---------WOX13(1)  <---------MYB59              <------------------------ANAC81 <----   agtaaaaaattgtatggattgatgattattacctcaacctaacctgtttagtttctcttcaaactttcttcttcttctccagatttgcagtgacagctct  7960800  Previous    Next  AGI:  At5g23610.1    Description:  similar to SWI1 (SWITCH1), phospholipase C [Arabidopsis thaliana] (TAIR:AT5G51330.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67108.1) Range:  from: 7957343    to: 7960275    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g23630.1    Description:  (MALE GAMETOGENESIS IMPAIRED ANTHERS); cation-transporting ATPase. Identical to Putative cation-transporting ATPase [Arabidopsis Thaliana] (GB:Q9LT02); similar to ACA2 (CALCIUM ATPASE 2), calmodulin binding [Arabidopsis thaliana] (TAIR:AT4G37640.1); similar to hypothetical protein CHLREDRAFT_60708 [Chlamydomonas reinhardtii] (GB:XP_001703596.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67113.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ82066.1); contains InterPro domain Haloacid dehalogenase-like hydrolase; (InterPro:IPR005834); contains InterPro domain P-type ATPase of unknown pump specific Range:  from: 7960481    to: 7967949    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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