Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100         <----------DOF2   ---------->ID1 --------AHL20(2) -------AHL20(1)                                                        <---------YAB1 -------AHL20(2)                                                      <---------AHL20(2) ------>AHL20(2)                                                      --------->AHL20(2) --->ATHB51                                                           --------->YAB1 ---ATHB1                                                         <---------AHL20(2) ----ICU4                        <-----------GT1                 <---------AHL20(2)     --------->AHL20(2) --->YAB1                      <---------AHL20(2)         ---------->DOF2          --------->AHL20(2) --->AHL20(2)                <---------YAB1            --------->ANAC58<---------AHL20(2) ----AHL20(1)               <---------AHL20(1)         --------->ANAC58--------->AHL20(1) ---ATHB51                  <---------AHL20(2)  <---------AHL20(2)--------->AHL20(2)<---------AHL20(2) ---ATHB12                <---------AHL20(2)   --------->AHL20(2)--------->AHL20(2)--------->YAB1  -- -->ICU4            <-----------GT1      <-------TEIL  --------->ANAC46<---------AHL20(1)<---------AHL20(2)   tttttttcgcttaaatgatatataacatattattttttctatatacatatataatacaagaaaagaatttaattatatttctctattatataaaattttg  7942700                                                                                 --------->ATHB51                           <---------ANAC55(2)                                   <---------ICU4                      --------------->AtSPL8                                     <--------ATHB1                      <---------------AtSPL8                                     --------->AHL20(2)                   <---------YAB1       <---------YAB1                           --------->YAB1              ------->TEIL --------->ANAC55(2)                                  <---------ATHB12           <---------ANAC55(2)        --------->YAB1                            --------->ICU4           --------->ANAC55(2)       --------->ICU4                             <---------ATHB51          --------------->AtSPL8     <---------YAB1                   --------->TOE2(3)  --------->AHL20(2)--------->YAB1 --------->YAB1                     --------->TOE1(3) ------->WOX13(1)<----------DOF2  <---------YAB1                   <-----------GT1             >>>>>>   tcaattacatagtatgtaacttttatagtacataatattatgattattttgagttttataagttatatataaccttaatacaataatttcagtatggttc  7942800                                                     --------->ARR11(3)              ----------->GT1                                                     <---------ARR11(3)        ----------->GT1                                       ----------->GT1                        <---------TOE2(3)                             >>>>>>>>>MYB98         <---------CCA1(2)         --------->DAG2                            --------->MYB52(1)  <---------AHL20(2)      --------->AHL20(2)                            ------>MYB46(1)     --------->AHL20(2)<---------ZAT18  ---------->DOF2                            ------>MYB83     <---------ICU4<----------DOF2--------->YAB1      <------ >>>>>>>>>>>LFY           <---------MYB59   --------->ICU4 <---------DAG2<---------AHL20(2)  --------   cattgtaaacattttcaaaaaatgtaaacctaacaaaatataagtaaaaattatatatctactttttgtgcatttttaataaggtgaaagttatattaaa  7942900                                                                      --------->AHL20(2)                                                                      <---------AHL20(2)                        --------->WRKY38(1)                          <---------AHL20(2)                        --------->WRKY12                          --------->AHL20(2)          --------->ANAC58                              <-------TEIL --------->AHL20(2)             -          --------->ANAC58                      --------->ANAC58  <---------AHL20(2)               --   --------->YAB1    <---------ANAC46           --------->ANAC58  <---------AHL20(1)           <----- ---AHL20(2)        <---------TOE2(3)       --------->ANAC58      --------->AHL20(1)       ---------- ->AHL20(2)    --------->ICU4               --------->ANAC58     <---------ATHB12       <---------TOE2(3)   tacaaaaatagcaagacatgtttacgttgacaaacaaacaaaaattaagcaagtcatgttcgtagcaataaattaatagtgggaacaattaagttaagcg  7943000                                                                             ------>NtERF2                                                                  ----------->GT1             ----------->GT1                                     ----------->GT1            <---------------AtSPL8                             --------->GLK1(2)            --------->DAG2                                     --------->ARR14(2)  <----------ID1                                              --------->ARR14(2)  ----------->GT1                                             <---------GLK1(2) ----------->GT1                                          <-----------------AGL1 -------->DAG2  <-------TEIL                              ----------------->AGL1 -------->DOF2<----------ID1                              ----------------->AGL2                 ---- -----ID1   --------------->AtSPL8                        <-----------------AG                   <--- >DOF2    ---------->DOF2                    --------->YAB1   <---------ARR14(2)                 ----   aaaaaggaaaaaaaaaggtacaaaaatgaaaacaaaatcaaactgaatgaaaatttggagtccagaatcggaaaaacgaggccgttttagagcttaataa  7943100                                                                                  --------->TOE2(2)                                                                      ------>NtERF2                                                                      --------->LBD16          ---------->ID1                                              <---------ATERF1(1)   ------>ZmHOX2a(1)                                                 <---------DEAR3(1)          ----  --------->TOE2(3)        *TSS<-----------GT1  ------>ZmHOX2a(1)    --------->ANAC46<---------ANAC58 ----->HSFC1(2)      <---------MYB52(1)  --------->LBD16            <---------LBD16  <---------ANAC58 ------HSFC1(2)     <-----------TGA1   <---------LBD16   <---------ZAT14   <----------DOF2    <------ ----->At4g35610    <-----------HVH21 ------>ZmHOX2a(1)  --------->ZAT14 ------>NtERF2       --------   gcttcctcatttgtctcttcttcgtcagtttattttcttcctccggagtcctgactcactactctcactctccggcgctttaaacttacgttctccgtcg  7943200                                             --------->ANAC58                                      <---------ALFIN1                                 ------>ZmHOX2a(2)      <---------MYB52(1)        <------ZmHOX2a(2) ----->DOF5.7(2)               --------->ARR14(2) ---MYB52(1)              --------->DEAR3(1) --------->ANAC58      <----------DOF2      --------->ZAT18 ->LBD16          --------->TOE2(3)  ----------->HVH21       <---------GLK1(1) ----------->GT1      -   tttactctgtaagttttctgccttagagcctccgatcgcctcaccgcatgcattctgtgctcgatttctctttttcttcgctggaaaaattgccctaatg  7943300                                                                      --------->TOE2(2)                                                                      --------->TOE1(2)                                                              <---------DOF5.7(2)                                                              --------->MYB52(1)                                                           --------->ANAC55(2)                                                           <---------ANAC55(2)           --------->HSFB2a(1)                            <---------TOE1(2)          <---------TOE1(3)          ---------->ID1       --------->MYB59          <---------TOE1(2)         <-----------GT1       <---------TOE2(3)          <---------TOE2(2)     <----------DOF2           <---------TOE2(2) -------->HSFB2a(2)             <---------DAG2 <---------AHL20(2)    ----------->RAV1(2)        <----   ttctcgatttcgaaggtttttgtgctatgggttacttttttccctatattttatagttcttaggtaacgatacctgcgtcttactgtttttgttcatttt  7943400                                                       <----------DOF2                     -------->P                                              <---------ARR11(3)                           ------->TEIL            <---------MYB52(1) --------->ARR14(2)  <---------TOE1(2)                      <----------        <---------At5g28300    <---------ARR14(2) ------>ZmHOX2a(1)                      ------>ZmHOX2a(2)       <-----------GT1   ------>ZmHOX2a(2)    --------->ARR11(3)                    <---------WOX13(1)    <----------DOF2      ================================HOX2a_HOX2a       --------->AHL20(2) <------ -------RAV1(1)      ----------->HVH21----------->GT1 <---------MYB52(1)   <---------AHL20(2)<-------   gttgtgctttcaccgtttagtcgctgatcggagtatttgactgtgaaaaatccttcgttttttggtttttgtttcatataaatcggattgatctaccttt  7943500                                                                          --------->GLK1(2)                                             <-----------GT1             --------->ARR11(3)                                       ----------->GT1                   <---------ARR11(3)  <----------DOF2                    <---------ANAC46            --------->ARR14(2) -GT1 <---------TOE2(3)              <---------ANAC58            <---------ARR14(2)                <- ----DOF2                            <---------ANAC58       --------->ALFIN1           <-----------RAV1(1) --DAG2<---------YAB1          <---------MYB46(3)      <-------TEIL    <---------TOE2(3)         <---   tgtgctttgatgtttgttttttgagcctatgcgttgttggcttgttataacttcacgttcatgtgtggattttgagattttggtagtgactgtgggtttc  7943600  Previous    Next  AGI:  At5g23570.1    Description:  SGS3 (SUPPRESSOR OF GENE SILENCING 3). similar to XH/XS domain-containing protein / XS zinc finger domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G48670.1); similar to XH/XS domain-containing protein / XS zinc finger domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G48670.2); similar to hypothetical protein [Vitis vinifera] (GB:CAN78103.1); contains InterPro domain Region of unknown function, putative Zinc finger, XS and XH (InterPro:IPR005381) Range:  from: 7943127    to: 7946053    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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