Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                ------>NtERF2                       ----------->TGA1                     --------->YAB1    ==================HOX2a_HOX2a                     <---------ICU4    <------ZmHOX2a(1)      <---------AHL20(2)     --------->DEAR3(1)                                        --------->ALFIN1  --------->ATHB12  --------->ICU4    <----------ID1                                 <---------ANAC46 <---------YAB1     <---------YAB1  --------->DAG2                        ---------->DOF2 --------->ICU4   --------->YAB1   ---------->DOF2<------ZmHOX2a(2)     ------>ZmHOX2a(2)      <----- -------TOE2(3)  --------->ICU4<---------------------WRI1 -------->P<---------YAB1   <---------bZIP60(2)   gagattattgaattgagcgatgatgatgacgacgacgaaaaggacaaaaacgatcaagcttaccagagttatgatccaaagaaggtgatgtggttctatg  7919000                                                       ----------->TGA1                                                     <---------ANAC58                                                     <---------ANAC46                                                 ------->MYC3                                                 <-------MYC3                                         ------>ZmHOX2a(2)                                        <------ZmHOX2a(2)                  ------->MYC3          --------->GLK1(1)        ----------->GT1                <---------ARR11(3)                         --------->LBD16        <----------ID1                 --------->ARR11(3)                        <---------HSFB2a(2)     --------->MYB52(1)                <---------AGP1<---------ANAC58            --------->HSFB2a(2)     ---------->DOF2                   <---------ARR14(2)             <-----------RAV1(1)------------  --------->TOE2(3)                    --------->ARR14(2) <---------ANAC46   <---------GLK1(1) ----------------->AGL1               <---------CCA1(2)----------->HVH21     --------->GLK1(1) ----YAB1         <-------MYC3   ----------->HVH21--------->ALFIN1  <----------DOF2  --------->GLK1(1)   aataccctaaaggaaaaacacatggaccattctctctcacagatctcaaaacgtggagtgacgaagagtactttgttggagttccagatttcaaagtatg  7919100                           <---------MYB59                          --------->MYB46(3)         ------>MYB46(1)             <---------ZAT18                       <---------MYB59             --------->ZAT18                       --------->TOE2(3)             --------->ZAT14 ------>MYB46(1)<------ZmHOX2a(2)          --------->DAG2     <------ZmHOX2a(1)   -------->P<---------CCA1(2) ------>MYB83     ---------->DOF2               <  <-----------RAV1(2) <---------MYB52(2)  --------->At4g35610--------->ARR11(3)             --------- --->AGL15   <---------ZAT14 ------>MYB83 <---------At4g35610<---------ARR11(3)            ----------   gaagacaggagagagtgcagtgctactaaccaaacttctatctcagatcaaaacctaattgaagaacttgcaaaaagcttagcattaagtctgaaaagtg  7919200                                         <---------ZAT14                                         <---------ZAT18                                         --------->ZAT18                               <---------------AGL15                             --------->At4g35610                             <---------At4g35610         --------->GLK1(2)                          <-------GAMYB  --------->ZAT14--------->ARR11(3)                         <-----------RAV1(1)            <---------GLK1(2)                         --------->MYB55(2)           ----------->ARR10 ----------DOF2          --------->MYB52(2)           --------->ICU4        ---------->DOF2      ---- >DAG2                   --------->MYB111(2)   ---------->DOF2        ----------->GT1            ---- >DOF2                   <---------MYB46(3) --------->ANAC46    <----------DOF2      ------>ZmHOX2a(1)   tgcattttgtttatttctctaaaacggttgttgctgaatttagtgcacataatgcaaagattctgacttttgttgtaaaaaagtctcctcttaaaatcca  7919300          <---------YAB1        <---------AHL20(2)        -------->ATHB1        <---------ICU4           --------->ATHB51        --------->YAB1           <---------AHL20(2)        -------->HAHB4           --------->AHL20(2)        --------->ATHB51        <---------AHL20(2)        <--------HAHB4      --------->AHL20(2)                         <---------ZAT14       <---------ATHB51   ------>ZmHOX2a(1)                            --------->ZAT18         ------       --------->ICU4    --------->TOE2(3)               <---------AtLEC2           <---------AHL20(2)       <---------YAB1    --------->TOE1(3)    ------>ZmHOX2a(1)        --------->ZAT14       --------     <---------ICU4   --------->GLK1(2)   <---------ARR11(3)           <---------ZAT18<------------CBF    --------->ICU4   <---------ARR14(2)   --------->ARR14(2)    --------->YAB1 --------->AHL20(2)    <---------YAB1   <---------GLK1(2)    --------->GLK1(2)    <---------AHL20(2)  <---------AHL20(2) ----->AtLEC2        --------->KAN4(2)    <---------ARR14(2) --------->YAB1    <---------AHL20(2) ----->ANAC46      <---------YAB1--------->ATHB12   <----------DOF2<---------ICU4  --------->AHL20(2)   tggaacataattattaacatgaagattccttaaaattatttgaaaatcctaattcttttgcataaataataagtgcagtatttatttaaattgaagaaag  7919400                                         --------->ZAT14                                         *TSS                                   -------->P                                               <--------                            ----------->RAV1(1)                                     <---------ANAC58    ----------->GT1        --------->ANAC46                 <---------WOX13(1)      <---------ANAC58 ----->GT1              <---------At4g35610               --------->ATHB12          <---------ANAC46 -->DOF2----------->TBP --------->At4g35610     --------->AHL20(2)             --------->ATHB12   tgaaacatgtataaaacccagaagtcagcacaacacttaccagtccagaattaaaaaaactgattgagacagagagaagaaagattgcttgaagaagacg  7919500                                             <---------AHL20(2)         <---------YAB1          <------ZmHOX2a(1)     --------->YAB1                 <----------DOF2        <---------GLK1(2)   ---------->DOF2              --------->AHL20(2)          <-----------GT1        <---------WOX13(1) --ID1   ----------->GT1     --------->WOX13(1)     <---------LBD16   --------->ANAC55(2) <---------YAB1   aagacaaaaggaggaaactttcttctcatttcaattaaaaaatccatttttttctctgggtttttctttctcatgtgattgtgtaattgattcttatcgt  7919600             <---------RAP2.6(2)            --------->RAP2.6(3)        <------------ATHB5        <---------ICU4        --------->ATHB12        <--------HAHB4        -------->ATHB1        --------->YAB1       <---------ATHB12           --------->ANAC58       --------->ICU4             --------->ANAC58     --------->WOX13(1)   --------->GLK1(1)   <------------------ATHB9     <---------ALFIN1 <---------ANAC46                         <---------ANAC58  --------->ANAC58     --------->HSFB2a(2)       <---------ANAC58                         <---------ANAC58  --------->ANAC46   --------->At4g35610         <---------ANAC58                ------>ZmHOX2a(1) --  --------->ANAC58   <---------At4g35610    ----------------->AGL1   <---------AtMYB61    <---------ANAC46   tttctcgcaatcattacggcttcttctgaaatcaacacgctcaatttccttccttggaaaattttggggttttggttttgttcctgtttcattcgtgtga  7919700                                 <---------ICU4                                <---------YAB1                                --------->ICU4                                 --------->ATHB12                              --------->YAB1                                   <---------AHL20(2)                             --------->ICU4                                   <---------AHL20(1)                           <---------ICU4                                     --------->AHL20(1)                   <---------At4g35610                                        <---------AHL20(2)                   --------->At4g35610                                        --------->AHL20(2)              --------->ZAT18<---------YAB1                              <<<<<<<<<<WRKY38     <------         ---------->DOF2   --------->YAB1                           ------>ZmHOX2a(1)  <---------ARR14(2)       --------->ANAC55(2)<---------ATHB12                          <----------DOF2<---------LBD16       <---------ANAC55(2)--------->ICU4               <------ZmHOX2a(1) <<<<<<<<<<WRKY26   --------- ------->CCA1(2) <-----------RAV1(2)                  ----------->GT1    <<<<<<<<<<WRKY43  <---------YAB1   gatttgattacttaagcgctcagatgaaatcatgataattaagaagcacaagagagaggaaattagagtcctttggtcaatttattggggaacttgattg  7919800                                                                                         --------->GLK1(2)                                                                                        --------->ARR11(3)                                                                              <---------ANAC58                                                                       --------->HSFB2a(2)                                                                      <-----------------AG                                                                      <-----------------AGL1                                                                      ----------------->AGL1                                                                      <---------LBD16   <---------GLK1(2)                                                                 <---------ARR11(3)     --------->ARR14(2)                                                                <---------RVE1(1)       <---------ARR14(2)                                                               ----------->ARR10        <---------ARR11(3)                       --------->ZAT2                       <------NtERF2     <---------ANAC58                     <------ZmHOX2a(1)                     --------->LBD16--------->ARR14(2)        --------->ZAT2 <---------At4g35610               <---------LBD16--------->LBD16<---------HSFC1(2)        <---------At4g35610                         --------->ATHB12<-----------GT1    --------->HSFC1(2)        <---------ZAT2 --------->At4g35610         --------->ICU4<---------GLK1(2)     --------->HSFB2a(1) ---WOX13(1) ---------->DOF2                    <------ZmHOX2a(1)--------->ARR11(3)    <---------HSFB2a(1) >ATHB12--------->At4g35610                 --------->ICU4<---------ANAC46<---------ARR14(2)     <---   ggatttagtcagcttcaaagtgaggagctgaagatggagaatggccatgaggaaagattggcggagagattttccggattgggtttcgaagattcttctc  7919900  Previous    Next  AGI:  At5g23480.1    Description:  similar to SWIB complex BAF60b domain-containing protein / plus-3 domain-containing protein / GYF domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G08430.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN80413.1); contains InterPro domain GYF (InterPro:IPR003169) Range:  from: 7918338    to: 7919281    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g23490.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G08440.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67077.1) Range:  from: 7919441    to: 7926631    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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