Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                       <---------MYB111(2)                                     <---------MYB46(2)                                     <------------MYB.PH3(2) --------->At4g35610                 <---------MYB59 <---------YAB1 <---------At4g35610                 <---------MYB52(2)                         --------->ARR11(3) ------>TEIL<---------YAB1           <---------MYB111(1)------->TEIL  <---------ANAC58   <---------ZAT6 --ANAC46 ----------->GT1  --------->ATHB12     <----------DOF2       <---------ANAC58   ----------->GT1   tgaagctgcaaattgttattcagaaaaactgatttgctaactaactccaacttttacgaatgttttttagtggattgcaagagaacttgtagtgttacaa  7917900                                            <----------DOF2           <---------ARR11(3)                                            ------>ZmHOX2a(1)         <---------AHL20(1)                                           --------->TOE2(3)          <---------AHL20(2)                                        <---------ARR11(3)            --------->ARR11(3)                                        --------->ARR11(3)            --------->AHL20(2)                                        <---------ARR14(2)            --------->AHL20(1)                                        --------->ARR14(2)         <---------AHL20(2)                     --------->DAG2    <---------GLK1(1)           --------->AHL20(2)                    ---------->DOF2    --------->GLK1(1)         --------->AHL20(2)                 <---------ATHB12      <---------KAN4(1)         <---------YAB1           --------->ANAC58            --------->KAN4(1)        --------->TOE2(3) <---------------AGL15           --------->ANAC58           <---------KAN4(2)         --------->YAB1    --------------->AGL15         <---------ICU4       <---------ANAC46    ---------->DOF2<---------AHL20(2)      ----------->GT1      --------->WOX13(1)   <---------DEAR3(1)  --------->YAB1 --------->ICU4      <----------DOF2    <---------YAB1--------->YAB1      ---------->TaMYB80   <---------YAB1      <-----------GT1  -----   aggcttattaatcaggccaatgaaaagggatggcgaagagaatatcctttaataaagcattatcaatattaatatattgttttactttgaagagtaacta  7918000                                                                                          <---------LBD16                                                                             <---------HSFB2a(1)                                                                             --------->At4g35610                                                                             <---------HSFC1(2)                                                                             --------->HSFB2a(1)                                                                             --------->HSFC1(2)                                                                             <---------At4g35610                              <---------ANAC58                               <---------ZAT2 ---------                           <<<<<<<<<<GT-3b                     <---------LBD16          <---------ARR14(2)              <----------DOF2 <---------ANAC58               <---------ARR14(2)         --------->ARR14(2)    <---------YAB1  <---------MYB52(1)    <---------At4g35610--------->GLK1(2)          --------->GLK1(2) ------>GT1--------->GLK1(2)<-----------GT1                  --------->ARR14(2)        <---------GLK1(2)   gtgaatatgagagactctttctgttatatttttcttgacttcttagctaatacactatcccagtatctggagaagagggagcttcttcagaatccggatg  7918100                                    --------->HSFB2a(2)                   --------->ATHB12                                    <---------HSFB2a(2)                  <---------YAB1                         --------->LBD16                               --------->YAB1                        --------->HSFC1(1)                            <---------YAB1                        <---------HSFC1(1)<---------ARR11(3)          --------->ICU4                        <---------HSFB2a(2)                        --------->ICU4                        --------->HSFB2a(2)      ------->TEIL      <---------YAB1                     <---------ARR14(2)   --------->ARR11(3) --------->ICU4    <------ZmHOX2a(1) >LBD16      <---------MYB46(3)<-----------RAV1(1) --------->TOE2(3)--------->YAB1                 --   aacagaagaggctagtggatgaagttccagaaattgttgcagaagaacttgaacctgaatgtgaagatgatgatgatgataggacaatagaagatagcct  7918200                                                                                                 <---                                                                                         --------->KAN4(2)          ----------->RAV1(2)                                                           <---------HSFC1(2)       ------>MYB46(1)                                                                  --------->HSFB2a(1)       ------>MYB83                                                                     <---------HSFB2a(1)     --------->MYB46(3)                                                                 --------->HSFC1(2)     --------->AtMYB61                                                              --------->ANAC58     <---------MYB46(2)                     ---------->DOF2                         --------->ANAC58     <---------MYB59                    --------->MYB46(3)                --------->ANAC58       <---     <---------MYB111(1)   <----------ID1------->GAMYB                    --------->ANAC58   <-------  <-----------GT1 <-------TEIL ---------->DOF2       <-----------GT1 <---------ZAT6 ----------->GT1 ------------->AtSPL8  ---------->DOF2  <----------ID1     <---------GLK1(2) ---------->DOF2 <-------   cattgtaccaaaccctgaggctcatcaaagtgacaaagagcaacgacaaagagatttaccagtttcttctagtgtcaagaaaagtcaagaaaattccttg  7918300                                      *TSS           --------->LBD16       <---------ANAC46          <---------HSFB2a(2)  <---------ANAC46       <---------ARR14(2)    <---------At4g35610       --------->ARR14(2)    --------->ZAT2            <---------HSFB2a(2)            <---------YAB1       --------->GLK1(2)     --------->At4g35610  <-----------RAV1(1) --------->TOE2(2) ------ANAC58       --------->At4g35610           ===============================RAV  --------->ICU4 ------ANAC58 ---------->DOF2<---------ZAT2<---------HSFB2a(2)        --------->TOE1(2) --ANAC58 --------->HSFB2a(2)<---------ZAT14--------->LBD16          ----------->RAV1(2) --ANAC58<---------LBD16<---------TOE2(3)  --------->HSFB2a(2)      ------->TEIL <---------At4g35610   cttcttaagaatccggaagagcagttgaggctgctgtgtgatgttcccgatgttgttgcagaaaaacttgaacctgagtttgtagatgatgatggaaaac  7918400                   ------>MYB46(1)                   ------>MYB83                 <---------MYB59                 <---------MYB46(2)                 --------->MYB46(3)                 --------->AtMYB61                 <---------MYB111(1)               --------->SPL7             <---------SPL7            <---------ANAC58            <---------ANAC58           --------------->AtSPL3           --------------->AtSPL8          --------->MYB52(1)          ------->TEIL          --------->SPL7                                                                       ------        <---------SPL7----------->RAV1(2)                                                     -------       <---------ANAC58                                                                    <XXXXXXXXX       <---------bZIP60(2)                                                                 --------->ARR14(2)       <---------ANAC58                                                                    <---------ARR14(2)       <---------ANAC55(2)                                                   <-----------GT1  <------       --------->ANAC55(2)                                          ------->GAMYB   --------->GLK1(2)      <---------------AtSPL8                                      --------->ANAC58 <---------GLK1(2)      <---------------AtSPL3              <-------TEIL            --------->ANAC58 --------->ARR14(2)      --------------->AtSPL3    <---------ZAT14---------->DOF2    --------->ANAC46 <---------ARR14(2)   tagtaaatgacgtaccgtaccaaaccctgaagccttcactgaggcgcatcaaagtgatgaagaaatacaaccaagtgatttaccagattctagtatccag  7918500                                         <---------PCF2                                        <---------ANAC58                                        <---------ANAC58                                       <-------TEIL                                      --------->ALFIN1                                  <------MYB46(1)              ------>MYB46(1)        ------->PIF5                                       <------MYB83    --------->HSFB2a(2)              <-------PIF5                                     <--------P    <---------HSFB2a(2)             --------->ZAT2                                   <---------ANAC46 --->LBD16    ------>MYB83          <---------ZAT2                                  <---------MYB46(3) -->HSFB2a(2)--------->ANAC58       --------->At4g35610                             --------->ATHB12 XXXXXXXXXXXMIR781<---------ARR14(2)<---------At4g35610                   <------ZmHOX2a(1)   <------ ---HSFB2a(2)--------->ANAC58     <-----------RAV1(2)     --------->TOE2(3) <-----------------AGL3---   aaaactctagaagaccagccaatatggactgcttctgcaggtgcgtcccattctttgtaacttcaattcatcgataggacttaaattggttggattaatg  7918600                <----------DOF2                  --------->YAB1                  --------->ARR11(3)          <---------ANAC58        --------->At4g35610                    ---------->DOF2         ----  ------>ZmHOX2a(1)   ---------->DOF2  ------->TEIL                     --------->ANAC46       <----- ---TOE2(3)------>ZmHOX2a(1)      <---------At4g35610          --------->ALFIN1  <---------ARR11(3) ---->TEIL<---------ANAC58   <---------YAB1    ------>ZmHOX2a(1)  <---------ANAC46      <---------ZAT18   aatcctattcgtccttgcctttgtcaaagtgatgttagatgaatgtgtccttcatagttaactaagtggtgtccaagaagcgagatattgtgaacttgat  7918700                                                                    <---------At4g35610                                                                    <------NtERF2                                                                   ------>NtERF2                                                                   --------->ANAC58                                                                   --------->ANAC58                                                                  --------->ATERF1(2)                                                                  <---------ATERF1(2)                                                                 <------NtERF2                                                                 --------->ATERF1(1)                                                                ------>NtERF2                                                                <---------RAP2.6(3)                                                                <---------ATERF1(1)                                                               --------->RRTF1(2)                                                               --------->RAP2.6(2)                                                               >>>>>>>>>AtERF-7                                                               >>>>>>>>>AtERF-5                                                               >>>>>>>>>AtERF-4                                                               --------->RAP2.3(3)                                                               >>>>>>>>>AtERF-3                                         ------>ZmHOX2a(2)     --------->RAP2.3(2)                                        <---------GLK1(1)      --------->ANAC58                                        <------ZmHOX2a(2)      <---------ATERF1(2)                                        --------->GLK1(1)      --------->DEAR3(1)                                       <---------ARR14(2)      --------->ANAC58                                       <---------ARR11(3)      --------->ATERF1(2)                                       --------->ARR14(3)      >>>>>>>>>AtERF-2                                       <---------ARR14(3)      >>>>>>>>>AtERF-1                                       --------->ARR11(3)     --------->MYB46(3)                                       --------->ARR14(2)     --------->DEAR3(2)          --------->ANAC46        <---------AHL20(2)            --------->RVE1(1)       --------->RAP2.3(1)         --------->ANAC58       <---------ARR11(3)          ---------->DOF2            --------->ERF1              --------->ANAC58       <---------AHL20(1)          --------->YAB1             --------->ATERF1(1)      <---------REM1(2)      <---------CCA1(2)           --------->ICU4             <---------ATERF1(1)     --------->ZAT14 --------->PCF2              --------->ANAC46                --------->ZAT2          <---------ZAT14 -->ZmHOX2a(2)              --------->LBD16                 --------->ANAC46       --------->ANAC46 ----AGP1                  <-----------RAV1(2)--------->AtLEC2--------->RRTF1(1) --------->ZAT6     -   ctggacccatatatttgtttgtgtaaattccaggtaataaagatctccatgaagatgtgtacgagccgccagcaaatggcataacactgaacacggactc  7918800  Previous    Next  AGI:  At5g23480.1    Description:  similar to SWIB complex BAF60b domain-containing protein / plus-3 domain-containing protein / GYF domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G08430.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN80413.1); contains InterPro domain GYF (InterPro:IPR003169) Range:  from: 7918338    to: 7919281    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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