Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100     --------->MYB52(1)  ------->GAMYB <---------MYB52(2)                                           <XXXXXXXXXXXXXXXXXXXXMIR2934 --------->MYB46(3)                                    <-------TEIL -------WRKY45                                        ==========================HOX2a_HOX2a -------WRKY12                                        <------ZmHOX2a(2) -------WRKY38(1)                                    <---------ARR14(2) ----->WRKY18(1)                                     --------->ARR14(2)              ================ -------HVH21                         --------->LBD16--------->AGP1   <---------LBD16------>ZmHOX2a(1) >ZAT2  <---------ARR11(3)           <---------ANAC55(2)--------->WOX13(1)    <---------GLK1(1) -ZAT2  <---------GLK1(2)     --------->YAB1        --------->At4g35610  <------ZmHOX2a(1)      <---- -At4g35610             <-----------GT1        --------->ANAC46    <----------DOF2 ----------->RAV1(2)   tcaacgaacagattttagagagaattacacaattctaatccgtagctatacatcagatccatcaacgcgttttcaggaagaattctcctgtaacaaaatt  7909200                                                                                   --------->ANAC58                                                                            <---------ARR14(2)                                                                   <---------ARR11(3)                                                      --------->ZAT6<------ZmHOX2a(2)     --------->YAB1                  <-----------GT1                    --------->ZAT18==============HOX2a_HOX2a      <-               --------->YAB1                    --------->YAB1    --------->ARR11(3)    <---------ATHB12   <---------AtLEC2 --------->MYB46(3)     --------->YAB1     ----------->RAV1(1)  --------->ANAC58-- ================HOX2a_HOX2a              <---------ATHB12--------->ZAT14   --------->ARR14(2)     -- ---TEIL  ------>ZmHOX2a(2)             --------->WOX13(1)<---------ZAT14  <------ZmHOX2a(1)       --   catgtccatggatcgatttataaccagcatttgatggaaattcaatcaaaataagaacactatacaacagatcatgaggaatcggaagcaaatgataaac  7909300                              <----------DOF2                             <---------ANAC58                             <---------ANAC46                             <---------ANAC58                    <------NtERF2        --------->ANAC58 <---------ANAC58                      <---------DEAR3(1)        --------->ANAC58 <---------ANAC58                     --------->HSFB2a(2) --------ARR14(2)       --------->ZAT2                    <---------GLK1(2) ------->GLK1(2)  <-----------TGA1                   --------->TOE1(3) ------->ARR14(2) <-----------HVH21                  --------->TOE2(3)   ---------->DOF2            - ----->TEIL      --------->ETT(2)        <---------AHL20(2)   <---------HSFB2a(2)        <---------ZAT14   gaatctgaaaacgaaatcgtcgtcagagcttgcttttagctatttattcgtcttaccttagcttctcggcgaacaaaaagaagaaatggagagaagtgta  7909400                             ------>ZmHOX2a(2)                            <------ZmHOX2a(2)                           --------->GLK1(2)                           <-----------ARR10                           <---------ARR14(2)                           --------->ARR14(2)                           <---------ARR11(3)                     ------>ZmHOX2a(2)                    =============HOX2a_HOX2a                 --------->LBD16               <------NtERF2--------->At4g35610               --------->RAP2.3(1)               --------->ATERF1(1)               <---------LBD16              <---------ATERF1(1)              --------->ABI4(1)              ------>NtERF2--------->ARR11(3)             <---------DEAR3(1)             --------->DEAR3(1)             --------->RAP2.3(3)             --------->RAP2.3(2)             <---------ATERF1(2)                             <------NtERF2            --------->ATERF1(1)                             --------->LBD16            --------->RRTF1(1)                             <---------ANAC58                   <------ZmHOX2a(1)            --------->ERF1 <---------AGP1                  <---------ANAC58                <------NtERF2            --------->DEAR4(2)                             <---------ANAC46                --------->ATERF1(1)            --------->ORA47(2)                            <---------LBD16                 --------->LBD16            --------->RAP2.3(1)                           <------NtERF2                  <---------ANAC58        ---------->DOF2 <---------TOE1(2)                 --------->ATERF1(1)            <---------ANAC46        --------->MYB52(1)<------ZmHOX2a(1)             --------->ALFIN1                 <---------DEAR3(1)    --------->DAG2  <------ZmHOX2a(2)     --------->ICU4<---------DEAR3(1)               <---------ANAC58   ---------->DOF2 <---------ARR14(2) <-----------TGA1<---------O2                      <---------LBD16 -------->At4g35610--------->ARR14(2) <-----------HVH21 ----------->HVH21           <---------ICU4---   tcagcaaaagtaacgccgccggatcggaggatctgagaagcgtcagaattgaagagaggtggcggagagagagagagagaagacgataatggcggaggag  7909500                                                                <------NtERF2                                                    *TSS        <---------ATERF1(1)             <----                                                <---------At4g35610                          <-------                                                --------->At4g35610   <----------DOF2    --------->ZAT14                                   <---------ARR14(2)          --------->PCF2            <---------ZAT14                                   --------->ARR14(2)   --------->TOE2(2)              --------->ANAC46 <---------YAB1              --------->ATHB12  ----------->RAV1(1)<---------ALFIN1   --------->ZAT6 ------>ICU4                <---------YAB1 ----------->HVH21  --------->PCF5   <---------AHL20(2)<---   atgatgactcgactcaatttcgattcgatttcgattggattcgactcgacagcagaaacctatggccccctcctttcggatttatttccactacagaacc  7909600                                                  <---------YAB1                                                --------->YAB1                                    <--                                               <---------YAB1                                     <--                                            <---------ARR11(3)                                 <-----                                          <---------YAB1                                    ---------                                        --------->YAB1                                      <--------                                   --------->AHL20(2)                                    <---------AHL20(2)  --------------->AtSPL8           <---------AHL20(2)                                    --------->AHL20(1) -----DAG2               <---------AHL20(2) --------->ARR11(3)    --------->TOE2(3)     --------->AHL20(2) --GLK1(2) <----------DOF2         <---------AHL20(1)             <----------DOF2       <---------AHL20(2) -------DOF2             --------->AHL20(2)--------->YAB1      <-----------GT1         <---------AHL20(2)   tttttttggacttcttttttccaaaattttaatctattttatttatgatattatagtagtatttgttactttaatggctatgttttaaaattattttgta  7909700                                             <---------RVE1(1)                                             <---------CCA1(1)                                            <---------AHL20(1)                                            <---------ARR11(3)                                            --------->ARR11(3)                                <----------DOF2                   <---------YAB1         --------->ANAC58 --------DOF2<---------AHL20(1) <---------DAG2 -------DAG2 --------->AHL20(2)<---------ANAC58                                              <------- ------GT1   --------->AHL20(1)<---------ANAC58  <---------AHL20(2)                          <------- ------>AtSPL8  <---------AHL20(2)        --------->ANAC58           --------->AHL20(2)  ------>ZmHOX2a(1) -------AtSPL8  --------->AHL20(2)    --------->ANAC46   <-----------GT1                <---------MYB59   ctttatttttcgaaatattttattcttgcaattgctttattcgcaagatattttttttaaaacccctcatttttaatataagtttttagtcctaacttta  7909800              <------MYB83              <------MYB46(1)              ----------->GT1     <---------AHL20(2)    --------->AHL20(1)                                                        <---------AHL20(2)    <---------AHL20(1)                                                       --------->AHL20(2)   <---------------AGL15                                                  --------->YAB1 --------->AHL20(2)                    --------->AHL20(2)                <---------YAB1 <---------AHL20(2)                    <---------AHL20(2)           <---------ANAC58                - ---DOF2     --------->MYB111(1)   <---------GLK1(2)                <---------ANAC58               <- --DAG2      --------->MYB59 <---------YAB1                         --------->TOE2(3)         -------   tatttatatatttagtaggtaaatttgaattctcatagaatttttttagtaattagatttgaatttgtttccttgattataaaatgaaacaaaacaatgt  7909900                                                       --------->AHL20(2)                                                       --------->AHL20(1)        ----------->GT1                                <---------AHL20(1)  <---------YAB1                                       <---------AHL20(2) --------->AHL20(2)                         --------->ANAC55(2)        --------->YAB1 <---------AHL20(2)                         ----------->GT1     ---------->DOF2 -------->YAB1         --------->AHL20(2)   <---------ANAC55(2)--------->YAB1 --------YAB1          <---------AHL20(2)  <---------ICU4     <---------YAB1       <---------TOE2(3) ---->GT1       ----------->GT1      --------->TOE2(3)--------->AHL20(2)  <-----------GT1  --------->YAB1   tattaaaattcagtaaaaatgttatttatatttcaaaaaacttaataagtaacaaattttatttatcaaagtataatatccatctaagataaatcatata  7910000                          --------->HSFC1(1)                          <---------HSFB2a(2)                          --------->HSFB2a(2)                   <---------AHL20(2)                                    --------->WOX13(1)                  --------->AHL20(1)     --------->AHL20(2)         <---------ATHB12                  <---------AHL20(1)     <---------AHL20(1)  ----------->GT1           ------>ZmHOX2a(1)            <-------TEIL  <---------HSFC1(1)          <-----------GT1--------->YAB1   <---------MYB59        <---------YAB1   <---------LBD16 <---------AHL20(2)  <----------ID1  ---------->DOF2   aactctaattttgatacatatatattttctggaaatgttttaaaaaatttcatatataacaaggcgataaatcataaatcaaagttttcctaacaatgtc  7910100  Previous    Next  AGI:  At5g23450.1    Description:  ATLCBK1 (A. THALIANA LONG-CHAIN BASE (LCB) KINASE 1); diacylglycerol kinase. Identical to Sphingoid long-chain bases kinase 1 (LCBK1) [Arabidopsis Thaliana] (GB:Q9LRB0;GB:Q9FHL3); similar to D-erythro-sphingosine kinase/ diacylglycerol kinase [Arabidopsis thaliana] (TAIR:AT4G21540.1); similar to diacylglycerol kinase [Arabidopsis thaliana] (TAIR:AT4G21540.2); similar to sphingosine kinase [Lotus japonicus] (GB:BAD86587.1); similar to hypothetical protein OsJ_030898 [Oryza sativa (japonica cultivar-group)] (GB:EAZ16689.1); similar to hypothetical protein OsI_033169 [Oryza sativa (indica cultivar-group)] (GB:EAY79210.1); contains InterPro doma Range:  from: 7904756    to: 7909552    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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