Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                             <-------TEIL                                          --------->ARR14(1)                                         <---------GLK1(2)                                   --------->ZAT2                                   --------->At4g35610                   <----------DOF2                           <------ZmHOX2a(1)                      --------->ANAC58           --------->ARR11(3)      <---------At4g35610            --------->ANAC55(2)     <---------CCA1(2)           <---------ARR11(3)----------->ARR10      <----------DOF2    --------->ICU4 ------>MYB46(1)    <----------DOF2      <---------TOE2(3)--------->GLK1(2)       --------->ANAC58    ------>MYB83 <---------ARR11(3)--------->TOE2(3)   ----------->ARR10   ---------->DOF2       <-----------GT1   caatttctttgaagaactcaatcttataaggaagattagctgagattcgtttccctttccaaacagcaacgtaatctttgagtttaccttccataccttc  7903400                                                                   --------->ARR14(2)                                               <---------ARR14(2)  <-----------ARR10                                               <---------MYB52(1) <---------CCA1(2)                                               --------->ARR14(2) ------>ZmHOX2a(1)                                             ----------->GT1   <------ZmHOX2a(2)                                           <---------ZAT14    --------->ARR14(2)                                           --------->ABI4(2)  <---------ARR14(2)         <---------HSFB2a(2)               <---------ZAT18    <---------ARR11(3)         --------->HSFB2a(2)            ------->GAMYB         --------->ARR11(3)        <---------LBD16          --------->TOE2(3)       --------->TOE1(3)     --------->MYB46(3)          --------->TOE1(3)--------->ZAT6------>ZmHOX2a(2)                   -    ------->TEIL       --------->ANAC55(2) --------->ZAT14  ----------->ARR10                       <    -------->P       <-----------GT1<---------WRKY12    --------->ZAT6               <---------At4g35610   taaatcaacctctggaactcgatttacatgataaaccttcaacggtgcagttactctaaccctagatcctatcttcgccttcgcttccgcttcgatttct  7903500                                                       <---------AHL20(2)                                                    <---------ARR14(2)                               <---------DEAR3(1)   --------->ARR14(2)                              --------->ATERF1(1)   <-----------ARR10                              <------NtERF2     <---------At4g35610               <------ZmHOX2a(1)  <---------ANAC46--------->LBD16           --------->ALFIN1  <---------SPL7     --------->At4g35610        <---------DEAR3(1)  <---------RAP2.6(2) <---------LBD16        <---------ANAC46    <---------ANAC46<-----------ARR10                                   <----     ----------->HVH21      <---------ANAC58<---------ARR11(1)                       --------->HSFB2a(2)     ----------->TGA1       <---------ANAC58------->TEIL <-----------GT1             <---------HSFB2a(2)   --------->At4g35610 <---------ARR14(2)   <---------ARR14(2)                       --------->HSFC1(1)   <---------At4g35610 --------->ARR14(2)   --------->ARR14(2)                  <---------MYB46(3) ----->ZmHOX2a(1)     <------ZmHOX2a(1)     --------->GLK1(2)              <---------ARR14(2)   <---- ---------At4g35610   --------->ATHB12     <---------ARR14(1)   --------->REM1(1)    <---------HSFC1(1)   tcctctgatgacggtgaggacgaaggattggcgtctgcgtttatcgaatctgcggattttatcgctacatcgcatcgaatcgtggttcgagaagtttttc  7903600                                                                                      --------->At4g35610                                                                                   <-------GAMYB                                                                                   ==================                                                                                   <------NtERF2                                                                                  <---------DEAR3(2)                                                                                  <---------MYB46(3)                                                                                 <---------ANAC46                                                                                 <---------RAP2.6(2)                                                                                <------NtERF2                                                                             <---------ABI4(1)                                                                            --------->ALFIN1      ---                                                             --------->CCA1(2)--------->ALFIN1    <--      <---------ANAC58                          ----------->HVH21          <---------DEAR3(1)   <----      <---------ANAC58                         <-------TEIL <---------ARR11(3)<---------AtMYB61<-----      <---------ANAC46      ----------->GT1   --------->ALFIN1          --------->ALFIN1     -------- -----ANAC58       <---------TOE2(3)       <-----------------------TaNAC69(2)--------->ATERF1(1)<---- -----ANAC58 --------->ATHB12              --------->ALFIN1 --------->ARR14(2)<---------DEAR3(1)<----   ttgagcttgagtgtttgatttgagattgagaggtgaatagcgagagaggtgcgacgatgcaagatttgagagccatgggggtggcggtagcagtagtggc  7903700                                                    <---------At4g35610                                                    <---------DEAR3(2)                                                    --------->At4g35610                                                    ----------->GT1                                                   <---------MYB46(3)                                                   <---------DEAR3(1)                                                  <---------ORA47(1)                                            <---------DEAR3(1)                                           <------NtERF2                                          <---------ERF1                                          <---------RAP2.3(1)                                          <---------ORA47(2)                                          <---------DEAR4(2)                                          ------>NtERF2                                         <---------ANAC46                                         <---------RAP2.3(2)                                         --------->ATERF1(2)                                         <---------RAP2.3(3)                                         <---------ATERF1(2)                                         <---------DEAR3(1)                                        --------->ATERF1(1)                                        <------NtERF2                                        <---------ABI4(1)                                        --------->RAP2.3(1)                                        --------->At4g35610                                        --------->DEAR4(2)                                        <---------At4g35610                                        --------->DREB2C(1)                                       <---------RAP2.3(1)                                       <---------ORA47(2)                                       <---------ERF1                                       <---------ATERF1(1)                                       <---------DEAR4(2)                                       ------>NtERF2<---------ATERF1(1)                                      <---------DEAR3(1)                                      <---------ANAC46----------->HVH21                                      <---------ATERF1(2)                                      <---------DREB2C(2)                            <---------DEAR3(1)    <---------ANAC46                           --------->SPL7--------->DEAR3(1)     --------->ARR14(2)    <---------ORA47(1) --------->ATERF1(1)     <---------ARR14(2)  <---------SPL7<---------RAP2.6(1) <---------At4g35610     ----------->HVH21<---------ATERF1(1) =======================MYC_MYB       <---------RAP2.3(3) ------>ATERF1(1)     <------ZmHOX2a(1)<---------RRTF1(1) ----NtERF2        --------->At4g35610<---------RAP2.3(2) -----ANAC46       <---------At4g35610<---------RAP2.6(2) ----LBD16    <---------ANAC58        <---------RRTF1(3) ->ALFIN1     <---------ANAC58        --------->ATERF1(2)                                   --------- -----ANAC58  --------->TGA1a         <---------RRTF1(2)  ---------->DOF2    <---------CCA1(2)     -- -----ANAC58  <---------TGA1a <------NtERF2--------->ATERF1(1)             --------->YAB1 <---------ZAT14   ggaagcggatagacagtcgtgagaggacggacggcgaatggcggcggcgatggccggtgacaaagcgatttggctactcatatcagtccgagtgaagaaa  7903800                                                                                         <-----------GT1                                                                                   <---------TOE2(3)                  --------->CCA1(2)                                               <-----------GT1                 <---------ARR11(3)                                          --------->AHL20(2)                 --------->ARR14(2)                                          <---------YAB1<---------YAB1                 <---------ARR14(2)                     ---------->ID1       <---------AHL20(2)     --------->ALFIN1        ----------->GT1       <----------DOF2         --------->CCA1(2) -->GT1        ----------->ARR10                *TSS   <-----------GT1    <---------ARR11(3) ------->AHL20(2)--------->ARR11(3)      <---------GLK1(2)<----------DOF2 --------->ARR11(3)   aaaaaatgtgtgtgaagaagatttgtgcaagtggaataaaactgattcgttttcttttttcttttttcagtgggaagatataattaacattttactatta  7903900                 ------------>CBF              <----------DOF2             <---------ANAC58             <---------ANAC58           <-----------GT1         <---------AHL20(2)                                              <-       --------->ARR11(3)         --------->YAB1                                                <----       <---------AHL20(1)        <---------YAB1                                                 <----       --------->AHL20(1)      --------->YAB1                                 --------->CCA1(2) -----       <---------AHL20(2)      --------->AHL20(2)                      --------->ATHB12    <---------AHL20(2) --------->TOE1(3)          <---------ICU4     <------------CBF       <---------YAB1       <---------AHL20(1) --------->TOE2(3)    --------->YAB1       <-----------GT1    --------->AHL20(2)           --------->AHL20(2)   cgaccttaatattttgctttacaattttaaaaattataaaaattttgaccattgatatatatgtttatatatatcattggatataagttgtattttattt  7904000                                                                                  --------->ANAC46                                                                                  --------->ANAC58                                                                                  --------->ANAC58                                                                                ---------->DOF2                   --------->ICU4                                              --------->ARR14(2)             --------->AHL20(2)                                                <---------ARR14(2)            --------->AHL20(2)                                               --------->LBD16          --------->YAB1               --------->AHL20(2)                  <---------LBD16       --------->YAB1     ------>ZmHOX2a(2)                               --------->MYB52(1) --------YAB1<---------AHL20(2)       <---------ATHB51                  <---------ZAT14 -----AHL20(1)   --------->AHL20(2)   <---------ATHB12                  --------->ZAT14 -----AHL20(2)  --------->AHL20(2)    <---------AHL20(2)             ----------------------->TaNAC69(2) ---->AHL20(2)  <---------AHL20(2)    --------->AHL20(2)          <-----------HVH21                 -   tatttttgttaataataaataattttgatctaaaatacaaataattttcaaaatgtatagttgaagatggtcagtccaccggataagccactaaaattag  7904100                                                   ----------->GT1                                    --------->ANAC58                                    --------->ANAC58                              --------->AHL20(2) <---------ANAC58                                ----                            ------>MYB83         ----------->GT1                                 <---       <---------AHL20(2)   ------>MYB46(1)      <---------ANAC58                                ----     <---------YAB1       <---------MYB59        <---------ANAC46                                <---     --------->ICU4   ----------->HVH21   <---------GLK1(2)                   <-----------GT1  ------ ---------->GT1      <---------WOX13(1)   --------->ARR11(3)    ---------->DOF2             ---------   atgtgttattattttgagttttgactgaccaaataaaaacgaaagattatggagtgaaaatcaaatgaaagaatgcaaattaacctcatggctcatgcac  7904200                                                                   <---------YAB1                                                                 --------->ATHB12                                                                 --------->ATHB51                                                                 <---------ICU4                                                                 <--------HAHB4                      <---------YAB1                            --------->ICU4                    <---------ZAT6                              <---------YAB1                <---------YAB1                                --------->YAB1              --------->ATHB12                                <--------HAHB4 --->MYC3     <--------HAHB4                                  <---------ICU4 ----MYC2    <------ZmHOX2a(2)                               <---------YAB1 --->MYC2  <---------ARR14(1)                               <-----------GT1 ----MYC3 --------->LBD16                              --------->AHL20(1)                           < ->TEIL--------->MYB52(1)                              <---------AHL20(2)                        ---- >AtLEC2<---------LBD16                                --------->AHL20(2)                ----------->ARR10   atggtttactaccggatcattagtgtgatagtgtctactatttccaaacgatggaaattttttatcattattagttggaagaattgatgctaaaatatgc  7904300  Previous    Next  AGI:  At5g23440.1    Description:  FTRA1 (ferredoxin/thioredoxin reductase subunit A (variable subunit) 1); ferredoxin:thioredoxin reductase. similar to FTRA2 (ferredoxin/thioredoxin reductase subunit A (variable subunit) 2), ferredoxin:thioredoxin reductase [Arabidopsis thaliana] (TAIR:AT5G08410.1); similar to lipoic acid synthase-like protein [Brassica rapa] (GB:ABV89629.1); contains InterPro domain Lipoate synthase; (InterPro:IPR003698); contains InterPro domain Electron transport accessory protein; (InterPro:IPR008990); contains InterPro domain Ferredoxin thioredoxin reductase, alpha chain; (InterPro:IPR004207) Range:  from: 7903048    to: 7903848    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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