Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                              <---------ICU4                            --------->YAB1                            -------->HAHB4                           --------->ICU4                           <---------YAB1                         --------->YAB1        <------------MYB.PH3(2)   --------->YAB1        <---------ICU4  ------>MYB83          <---------YAB1  ------>MYB46(1)       --------->ICU4 ----------->RAV1(1)   --------->AHL20(1) ------>GAMYB          <---------AHL20(1) -------->AtMYB61      <---------AHL20(2)                         <----------DOF2 --------MYB55(2)      --------->AHL20(2)     <----------DOF2    <---------ICU4      <---------ARR11(3) ------->MYB46(3)     --------->YAB1   <---------AHL20(2)      --------->GLK1(2)     --------->ARR11(3) --------MYB52(2)<---------AHL20(2)   --------->AHL20(2)   --------->YAB1       <---------YAB1 ------>ANAC46   --------->AHL20(2)   <---------AHL20(2) --------->AHL20(2)    <-----------GT1   <---   aaccaacataacaaactatttaaattataattatcgtctattaattttcttttaagacttaaaataatctttatcaatttttatcaatatcatccacaag  7879900                                                                                            <--------                                                                                  --------->YAB1                                                                               <---------ICU4                                                                           <---------AHL20(2)                          ---------->DOF2            <----------DOF2 <----------DOF2 --------->YAB1  --------->ZAT6  <---------AHL20(1)       <---------ICU4            <---------DAG2 <---------YAB1 ------ZAT6    --------->AHL20(2)  ----------->GT1   --------->TOE2(3)     --------->AHL20(2)    ----   tgtaagactatattcaataacatatttcaaaagtcgattgaaaaaacattacaaactttaatatgagacaactttatttaaaaattatcatatgatgaat  7880000                                                                     --------->YAB1                                                                     -------->HAHB4                                                                    --------->ICU4                                                                    <---------ATHB12                                                             <---------AHL20(1)                    --------->YAB1               --------->ARR14(2)<---------TOE2(3)              <----------DOF2                 --------->ANAC58    --------->YAB1        --------->YAB1                        --------->ANAC58  <---------YAB1        <---------ICU4  <----------ID1   <---------CCA1(2)   --------->AHL20(2)     --------->YAB1<---------YAB1  <---------ZAT18           --------->AHL20(1) -YAB1 <---------YAB1 <---------YAB1 <---------ANAC46        <---------AHL20(2)                  ---- ------->GT1  <---------DAG2       --------->ZAT18         ------->TEIL              --------->ARR11(3)   tgtttattgatgatcacttttattatgagacaaatagtggcctatatcacgaattcacatgaatttattaatgatgctctctcttgagagcttgaaacaa  7880100                                       ----------->GT1                                   <---------AHL20(2)                        --------->TOE1(2)      -                           <---------MYB52(1)                               <---------HSFB2a(1)   ---                          --------->TOE2(3)                                 --------->HSFB2a(1)  <---         --------->At4g35610 ----------->GT1                               <---------TOE1(2)    -----       --------->YAB1     --------->TOE1(3)                         <---------ANAC58            <----     --------->GLK1(2)  <---------TOE2(3)      ---------->DOF2      <---------ANAC58            <---- ------>DOF2    ----------->GT1    --------->AHL20(2)         --------->ATHB12                  -----   aaagaagaatcagaagaatggttataaacgttagtaaaaaaatgtaaaacaaagtttttcaaactgatttgcgctccaacgttcgaaaacaaaattggga  7880200            --------->MYB46(3)                                <---------AHL20(2) ----->ZmHOX2a(1)                                             --------->AHL20(2) --->ZmHOX2a(2)                                         ----------->GT1                            <- ---ZmHOX2a(2)                                        <---------ANAC46                        <------ ---->ARR14(2)    <-----------HVH21                <----------DOF2                    <----------DOF2 -----ARR11(3)   ------->GAMYB                  <---------ARR11(3)          <---------ICU4    ------- -----ARR14(2)  --------->MYB46(3)              --------->ARR11(3)       --------->YAB1      -------- ---->ARR11(3)--------->MYB52(1)     ------->TEIL <---------DAG2        <---------ATHB12   <---------   tcctcgtgaattcatccaacggtcacaattctccatgtgaatctcttcaagaccttttgtgtaaaaaaattcaaatcaaaattattctctttttcaccac  7880300                                      *TSS                                     --------->AtMYB61                                   ------>MYB83                                   -------->P                                   ------>MYB46(1)                               --------->CCA1(2)                               <------ZmHOX2a(2)                  --------->AHL20(2) ------->GAMYB              <-------TEIL    --------->AGP1          <---------TOE1(3)   --------->ARR11(3) --------ANAC46   <---------AHL20(2)--------->MYB46(3)                                        ------- ---ALFIN1<---------TOE2(3)   <---------ARR11(3)                                          ---------->DOF2 -->AtMYB61   ----------->GT1 <---------ARR14(2)                     <---------AHL20(2)<----------ID1 ->MYB46(3)  <--------P       --------->ARR14(2)                 ------>ZmHOX2a(1) ---------->DOF2 <- --GT1  ---------->DOF2 <-----------GT1---------->DOF2    --------->AtMYB61   <---------YAB1---------   tgcttataagtaaaggttgataaatttttcaagatccaaccaaaagagagacttattccaccaattcctattttttttttttgattaaagcgaaaagaaa  7880400                                              ------>MYB46(1)                                          --------->ARR11(3)                                         <-----------GT1                                       --------->YAB1                                      <---------YAB1                                     <---------AHL20(2)                                     --------->AHL20(2)                                     --------->AHL20(1)                 --------->AHL20(2)     <-----                                    --------->YAB1                      <---------AHL20(2)     <-----          <---------At4g35610    --------->YAB1                      --------->YAB1      --------->ANAC46      <-----------GT1           <---------YAB1------>MYB83      <-------TEIL    --------->GLK1(2)  <----------DOF2             <---------bZIP60(1)           <---------------AtSPL8       --------->ZAT6  <---------DAG2              --------->bZIP60(1)           --------------->AtSPL8    --------->ZAT14 -->AHL20(2)       <----------DOF2 <---------YAB1           --------------->AtSPL3    <---------ZAT18 ----------GT1<----------DOF2 --------->GLK1(1)             <---------TOE1(3)  <---------GLK1(2) -->GT1   --------->At4g35610 <---------TGA2(1)  ------>ZmHOX2a(1)  <---------ATHB51  <---------ZAT14   ataactttttgcagctcttttctttttttgtgatatcattataataccttcctgtctaagtgaaggtacaataataaaacagtttctgttcactctactt  7880500                                   <----------DOF2                                   ------>ZmHOX2a(1)                                 ------>ZmHOX2a(2)                                <------ZmHOX2a(2)                               --------->AGP1                               --------->ARR11(3)             <---------YAB1                               <---------GLK1(2)          --------->TOE2(3)                               <---------ARR14(2)       --------->ARR11(3)                               <---------ARR11(3)       <---------ARR11(3)                               --------->ARR14(2)       --------->GLK1(2)                              <---------At4g35610      --------->RVE1(1)      <---------ANAC46 -----DOF2                <-----------HVH21         --------->YAB1 <-----------GT1 ----DAG2    ---------->DOF2  --------->At4g35610  --------->AHL20(2)      <-----------GT1   tatcccaattcgagccaaagttaactcttgtcagatccttttgtctgaacaaaataaaaatcttatttttaaccatttttccgtttaaactgatcaaatc  7880600                                                                                     --------->ANAC55(2)                                                                                     --------->ANAC58                                                                                     <---------ANAC55(2)                                                                                     --------->ANAC58                                                                           --------->YAB1         ---           --------->TOE1(3)                                               <---------ICU4         ---           --------->TOE2(3)                                            --------->YAB1            ---        <---------ARR14(2)              --------->MYB52(2)           <----------DOF2 --------->ANAC55(1) ---------->DOF2              ------->TEIL     <---------At4g35610---------->ID1     --------->ANAC46   ccaaaatgcaaaacctgaaatgggttttgatgaatctcttgtttgtttctgctcttgttcgtaattttgttctttcatcatcacaacaagtaatctgttc  7880700                                                                                   <---------GLK1(2)                                                                            <------MYB46(1)                                                                            <------MYB83                                                                            ----------->GT1                                                                           <---------AtMYB61                                                                           --------->MYB46(2)                                                           --------->ARR11(3)    --------->ICU4                                                           <---------ARR11(3)    <---------YAB1                                               --------->ZAT18             --------->MYB111(1)                                              <------ZmHOX2a(1)     --------->ATHB12            ----------->RAV1(1)            --------->HSFB2a(2)     <-------TEIL---------->DOF2   --------->ANAC58                 --------->YAB1        <---------GLK1(1)--------->MYB59   --------->ANAC58               --------->ANAC58        --------->GLK1(1)--------->MYB111(2) ------>ANAC58                    --------->ANAC58   <-----------RAV1(2)   <---------MYB46(3) ------>ANAC58              XXXXXXXXXXXXXXXXXXXX>MIR843 <------ZmHOX2a(1) <---------MYB55(1)      <-- ------>ANAC46<---------ALFIN1 --------->WRKY18(1) ----------->RAV1(1)    <--------P <---------MYB46(3)   aagccaagacagagcaacacttctgggtttcaagtcaagcatcatcgaggacacaacaggagttcttgattcatgggttggtaaagattgttgcaatgga  7880800  Previous    Next  AGI:  At5g23400.1    Description:  disease resistance family protein / LRR family protein. similar to leucine-rich repeat family protein [Arabidopsis thaliana] (TAIR:AT1G33600.1); similar to H0402C08.6 [Oryza sativa (indica cultivar-group)] (GB:CAJ86230.1); contains InterPro domain Leucine-rich repeat, N-terminal (InterPro:IPR013210); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611) Range:  from: 7880338    to: 7882637    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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