Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                         <-----------GT1                                       --------->YAB1                                    <---------ICU4                                   <---------YAB1                                 <--------HAHB4                            <---------ANAC55(2)                            --------->ANAC55(2)                       <---------ICU4 <---------YAB1                      <---------ARR11(3)                      --------->AHL20(1)                      --------->ARR11(3)                  <---------AHL20(2)             <---------AHL20(2)  --------->YAB1        --------->AHL20(1)             --------->AHL20(2)  <---------ICU4        --------->AHL20(2)       <---------AHL20(2)   <---------ANAC58           <---------AHL20(2) --------->AtLEC2     <---------AHL20(1)               <---------AHL20(1) ------>ARR11(3)      --------->ICU4--------->YAB1   <---------AHL20(2) -------ARR11(3)  --------->YAB1<---------YAB1       <---------AHL20(1) --->DOF2    <---------YAB1 <---------ANAC58        --------->YAB1       <---------ZAT6----------->GT1 -YAB1 --------->AHL20(2) <-----------GT1      ----------->GT1--------->YAB1  <---------WOX13(1)   <-   gacattcaaataaatataaatgaaaatattacttatcattataacaatattgtataatattttatcagaaatatagtgtaattgatgaattgtatttagt  7866300                                                                               <------MYB46(1)                                                                              --------->MYB59   -----                             ------>ZmHOX2a(1)                   ----------->GT1            <--------                        <---------ANAC58                       <---------AtLEC2<------MYB83 <--------  ----------->GT1<----------DOF2                   <-----------GT1         --------->GLK1(2)---------  <---------MYB46(3)    <---------ANAC58       <---------AHL20(2)--------->ANAC58         ----------- --------O2     --------->TOE2(3)             --------->AHL20(2) --------->ANAC58       <------ZmHOX2a(2)   caagtggttaactgttcacctttatagcttcctaatagtttgactctattaaatcacattattttgcaagtaaaaagaatttggttatggatcagatttt  7866400                                                                     --------->ICU4                                                                     <---------YAB1                                                                 --------->AHL20(1)                                                                 <---------AHL20(1)                                                                 --------->ARR11(3)                                                   <---------------AGL15        -------->HAHB4                             --------------->AGL15        --------->YAB1                             ==================================================       <---------ATHB12                           <-----------------AGL1      <---------TOE2(3)                     <---------------AGL15<---------ARR11(3) ------>GT1                                 --------------->AGL15--------->AHL20(2)             ----- -GLK1(2)                                   ========================================================= -ARR14(2)         --------->AHL20(2)       <----------DOF2      <---------AHL20(2)            ------ >ARR11(3)<---------YAB1                    <---------DAG2  ------------>CBF            ----------->GT1 >ARR10--------->ICU4              <---------ZAT6 <-----------------AGL2   <---------YAB1      <-----   gttaatctaatgatgctaaaaaaaaataggtagaatagtgctattacttttttctgaaaatgggcaatatattgattatgttcacatagactgaaaataa  7866500                                                                      --------------->AGL15                                   <---------AHL20(1)                 <---------------AGL15                                   --------->ARR11(3)                ----------------->AG                      --------------->AGL15                 <---------AHL20(2)                     ----------------->AGL2                <---------AHL20(2)                     =================================================================MADS_MADS    <---------AHL20(2)<---------------AGL15                --------->AHL20(2)   --------->AHL20(2)----------------->AGL1                --------->AHL20(1) --------->YAB1      ----------------->AGL3 --------->YAB1 <---------AHL20(1) ======================================MADS_MADS          --------->AHL20(2)                        - ------->CBF  <---------AHL20(2)   --------->AHL20(1)  <---------AHL20(2)      ---------->DOF2  <---- =====================================MADS_MADS        --------->AHL20(2) ---------->DOF2       <---- --->YAB1<---------YAB1      <---------TOE2(3)   <----------DOF2     ----------------->AGL1 <-------- ------GT1   --------->AHL20(2) >>>>>>>>>>GT-3b  --------->TOE2(3) <-----------GT1  ----------->GT1 <   caatattaaatactattaaatatgccatattaagaaaaatattgaataatactttaaaaaattaatttgttaccaaaaaagaaaagaagaaaatttagct  7866600                                                                              <---------ARR11(3)                                                                              --------->ARR11(3)   <-                                                                             <---------CCA1(2)   ----                                              <---------AHL20(2)         <---------ANAC58       <---- --------->ID1                               --------->AHL20(2)          <---------ANAC46       ----- ------DOF2                                  <---------AHL20(2)          <---------ANAC58       <---- -----DAG2                                  <---------WOX13(1)       <----------DOF2            ----- ---GT1                                   --------->ATHB12   --------->HSFB2a(2)               ------ -----------GT1  <-----------GT1       <------------CBF      <---------HSFB2a(2)          -----------   ttttccccttggatttgtttttcattctcttcttagttttacattgatttatttctcacatttctgaaactctttgcttatatcttgaaattcccaaaaa  7866700                                                                                                -----                                                                                                -----                                                                                                -----                                                                                                <----                                                                                                <----                                                                                                <----                                                                                                -----                                                                                               ------                                                                                               ------                                                                                               ------                                                                                               <-----                                                                                               ------                                                                                               <-----                                                                                          xxxxxxxxxxx       ---------->DOF2                                                                   --------->At4g35610 <---------AHL20(2)                                                                      <---------At4g35610 --------->YAB1                                                                       <-------TEIL ----------TBP                                                                     --------->KAN4(1) ----->AHL20(2)                                                                   <---------KAN4(2) -----ARR11(3)                                                                    <---------TOE1(2) ---->ARR11(3)                                                                --------->HSFB2a(2) -----AHL20(1)                                                                --------->HSFC1(1)<---- ---->AHL20(1)      ---------->DOF2                 <---------ZAT6            <---------HSFB2a(2) --->YAB1  ---------->DOF2                 --------->ATHB12               --------->ARR14(2) <------- ------>AGL3 ----------->GT1    --------->TOE2(3)   ----------->GT1       <---------ARR14(2) <-------   tatttataagaaagaaagtaaaaaaagaaaacttcattaacaaaatgaatgggagagttagaactaattttgagaggtttctcgaatgttcatctccacg  7866800                                                                                          <----------                                                                                          ------->TEIL                                                                                          <---------ARR11(1) -->MYC3                                                                                 <---------CCA1(2) -->MYC2                                                                              <---------HSFB2a(2) -->PIF5                                                                              --------->HSFB2a(2) ---MYC2                                                                         <---------HSFB2a(1) ---MYC4                                                                         --------->HSFB2a(1) ---PIF5                                                                         <---------HSFC1(2) -->MYC4                                                                         --------->HSFC1(2) --->O2                                                                          <---------KAN4(1) --->ANAC46                                                                      --------->KAN4(1) --->TGA1a                                                                      <---------KAN4(2) ----O2                                                                         ------->TEIL --->ANAC55(2)                    <---------AHL20(2)      <-----------GT1     ------->GAMYB ----TGA1a           ----------->GT1              --------->TOE2(3)          <---------MYB52(2) xxxxx>smallRNA(s)   --------->ANAC55(2)       <-----------GT1               --------->MYB46(3) ---MYC3    <---------AHL20(2)    --------->AHL20(2)  <---------YAB1        <---------TOE2(3) --ALFIN1  --------->AHL20(2) <---------YAB1  <---------AHL20(2)           <-----------GT1--------->GLK1(2) -----OsbHLH66     <-----------RAV1(2)    <---------AHL20(2)    --------->AHL20(2)--------->KAN4(2)   tgtcccgattcaattttatactcaggtaacttatgtttaattgtttattttatcttatttttacataaaaattgttttaacgaacattctcgaatctaat  7866900                            <-------MYC2           <---------AHL20(2)                            <-------MYC3           --------->AHL20(2)                            ------->MYC3          --------->AHL20(2)                            ------->MYC2          <---------AHL20(2)                            <-------MYC4         <---------AHL20(2)                            ------->MYC4        --------->YAB1                           --------->ANAC55(2) <---------YAB1                           <---------O2       <---------AHL20(1)                           --------->O2       --------->AHL20(1)                           --------->TGA1a    --------->AHL20(2)                           --------->ANAC46  --------->AHL20(2)    <---------AHL20(2)                           ========================================bZIP_DOF                           <---------TGA1a   --------->YAB1    <---------AHL20(2)                          <xxxxxxxxxxxxxxxxsmallRNA(s)        --------->ARR11(3)                         <------------OsbHLH66<---------AHL20(2)   --------->AHL20(2)                  <-------TEIL              <---------YAB1    <---------AHL20(1)               <---------HSFB2a(1)     <--------HAHB4         --------->AHL20(1)               --------->HSFB2a(1)     --------->YAB1         <---------ARR11(3)              <---------TOE1(2)        <---------ICU4       --------->ARR11(3)          <---------HSFB2a(2)         <---------YAB1        <---------ARR11(3)          --------->HSFB2a(2)         --------->ICU4  <---------AHL20(2)          --------->HSFC1(1)------->PIF5   --------->AHL20(2)--------->CCA1(2)   --------->AHL20(2)    <---------ALFIN1 <--------HAHB4 <---------TOE2(3)         <--------HAHB4   <---------AHL20(2)<---------At4g35610  <---------ICU4---------->DOF2            <---------ICU4   <---------AHL20(1)--------->At4g35610 --------->ICU4<---------AHL20(2)         <---------ATHB12 -ARR10   <---------HSFC1(1)<-------PIF5 <---------YAB1--------->AHL20(2)   <-----------GT1   tttaaaaaatttctcgaacgttcatctccacgtgtctctgatcattattatattaatttaaagatatatttatttgtttttcccatcattttgtacaaaa  7867000                                                                     <---------MYB52(2)                                                                --------->ANAC46                                                                --------->ANAC58         XXXXXXXXXXXX                                   --------->GLK1(2) --------->HSFB2a(2)               <-----------GT1        --------->MYB46(3)     --------->YAB1        <---------HSFB2a(2)     <-----------GT1  <---------ANAC46       ----------->RAV1(1)<----------DOF2     --------->ANAC58   --------->YAB1   tgttgtttgaacaaacattctcaaatccaacaaaaataatctaattctttcacttacagaaatttgaagcaactaaaatttacaaaaataaaccattttt  7867100                                                     <---------ARR11(3)                                                   ------>MYB46(1)                                                   ------>MYB83                                                  ----------->RAV1(1)                                                 --------->AtMYB61                                                --------->MYB46(3)                                               ------>MYB46(1)               ----------->GT1              --------->AHL20(2)     --------->WOX13(1)                  <---------ANAC58    ---------->DOF2         ----------->GT1    ------>MYB83              <---------ANAC58 --------->ANAC58          --------->DAG2     --------->ANAC46       <----------DOF2 --------->ANAC58        ---------->DOF2     --------->MYB46(3)      <---------DAG2          -------- XXXXXXXX>MIR824     <---------YAB1 <---------AHL20(2)          <---------At4g35610  <-----------GT1   aagaagcaaagaacaattacattataaaaaaggtagaataaatcaaacccaccaacatatttcttcaactgcttttcttgggttaaattactctctggtt  7867200  Previous    Next  AGI:  At5g23380.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G03610.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45300.1); contains InterPro domain Protein of unknown function DUF789 (InterPro:IPR008507) Range:  from: 7866745    to: 7870305    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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