Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100            <----------DOF2     <-------TEIL             <---------ZAT14          --------->AHL20(2) ---AHL20(1)         <---------DOF5.7(2)           --------->GLK1(2)           <---------AHL20(2) ---AHL20(2)         ---------->DOF2              <---------ARR14(2)          --------->YAB1 -->AHL20(1)       --------->DOF5.7(2)            <---------GLK1(2)       ------>ZmHOX2a(2) -->AHL20(2)      --------->TOE2(3)               --------->ARR14(2)     <------ZmHOX2a(2) --AHL20(2)       --------->TOE1(3)      ------>ZmHOX2a(1)              <---------ARR11(3) ->AHL20(2)     <---------TOE2(3)    <-----------GT1   --------->ZAT14  --------->ARR11(3)   ttttagttgtttcttttaaacgttaaagcatgttcattttttcctagttgcagattctacagtgatcaatttgggatctatattaattctatataagacc  7845700                                                                   <-----------GT1                                                                  --------->AHL20(2)                                                                  <---------AHL20(2)                                                        --------->ANAC55(1)                                                        --------->ANAC55(2)                    <---------AHL20(2)                  --------->ANAC58                   --------->AHL20(2)                   <---------ANAC55(2)              --------->AHL20(2)                   <---------AHL20(2)                   --------->ANAC58                 <---------AHL20(2)                <---------AHL20(2)                      --------->ANAC46        ----------->GT1               <---------AHL20(2)                    <---------ARR14(2)         <------MYB46(1)               --------->AHL20(2)             ----------->GT1 --------->AHL20(2)<------MYB83             --------->YAB1          ----------->GT1 --------->ARR14(2)   <---------AHL20(2)       <-   caaaacatgtaagaatattaattttatgtgttatttgtttagttacaaatgtaaaaatacgcaactaattaactatttcatttggttacatttttttata  7845800                                               <---------AHL20(1)                                               --------->AHL20(1)                      <---------ANAC55(2)      --------->ARR11(3)                      --------->ANAC55(2)      <---------ARR11(3)                    --------->AHL20(2)  --------->ANAC46                                 <---------AHL20(2)             --------->ANAC58           --------->ANAC58              <---------------AGL15             --------->ANAC46           --------->ANAC58           <-----------GT1      --------->AHL20(2) --------ICU4--------->ANAC58       --------->YAB1<---------AHL20(2)  --------------->AGL15   agtatgacaaaatataagcaaattaagtattgtttgaattataagcaaatatttttttgtttcaaattttttcaaaatataggtaaactattaaaaattg  7845900                                                              <--------HAHB4                                                              <---------ICU4                                                              --------->ATHB12                                   ---------->DOF2           <---------ATHB12                         <---------AHL20(2)                --------->YAB1                        <---------YAB1                  <----------DOF2                      <---------ICU4                    --------->TOE2(3)                    <-------  <---------YAB1  <---------AHL20(2)              <-----------GT1        <------NtERF2     --------->At4g35610   ttttttgattcaattttgttttaatttttatttgaatcaaagcatacactattttcttctttaatcatttaaggcctcgaaaatgttagaaacagcttaa  7846000                                                         ------->GAMYB                                                      --------->MYB52(1)                    --------->bZIP60(1)           --------->LBD16                 <---------YAB1              --------->GLK1(1)                     --------------->AGL15             <----------DOF2                 <---------GLK1(1)                     <---------DAG2 ---     <---------ARR14(2)                    <---------ZAT14                         <---------------AGL15  ------------>CBF  <---------bZIP60(1)    --------->ZAT14                        ----------------->AG  ----------------->AGL1            --------->ZAT14 <----------DOF2 <---------ALFIN1*TSS    --------- ---DOF2     <---------DAG2  ----------->HVH21    --------->At4g35610             ----------------->AGL3   atgggccaatatgggccttatgacttcatctctaacgctgaagtctgaactccgcttaacgggccatcacacacttcgtctctaaccttttgaagaaaga  7846100                                                       --------->ICU4                                                       <---------YAB1                                                   <-----------TGA1                                                  --------->bZIP60(1)                                                  --------->bZIP60(2)                                                  <---------bZIP60(1)                                                 --------->ATERF1(1)                                                 <------NtERF2                                   ----                                               <---------ANAC46                              --------     --------->ZAT18     <------NtERF2         <---------ANAC58  <------ZmHOX2a(1)           <-------   <---------At4g35610   ----------->HVH21     --------->bZIP60(1)                        =========== ------------------>WRI1------>NtERF2          <---------ANAC58  ================================HOX2a_HOX2a ->DOF2             <---------DEAR3(1)         <---------bZIP60(1)   --------->CCA1(2)    <------ZmHOX2a(2)   gtttgagcgcatcgcaaactcgaaggcgcgactgtgagagagaagaatggcgtcgtcatcatcgagaggagagatggagaagatgggaatcgatcagcta  7846200                                                                                                -----                                                                                                -----                                                                                                <----                                                                                                <----                                                                                              <------                                                                                              <------NtERF2                                                                                             <------NtERF2                                                                                             <-------                                                                                             ------>NtERF2                                                                                             --------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                           <------NtERF2                                                                                           --------->RAP2.3(1)                                                                                           --------->RRTF1(1)                                                                                           --------->RAP2.6(1)                                                                                          --------->ABI4(1)                                                                                          <---------ATERF1(1)                                                                                          ------>NtERF2                                                                                         --------->ANAC46                                                                                         <---------ALFIN1                                                                                         <---------DEAR3(1)                                                                                         <---------ATERF1(2)                                                                                         --------->DEAR3(1)                                                                                         --------->ATERF1(2)                                                                                         --------->RAP2.6(2)                                                                                         --------->RRTF1(3)                                                                                         --------->RAP2.3(3)                                                                                         --------->RAP2.3(2)                                                                                         --------->RRTF1(2)                                                                                        --------->ATERF1(1)                                                                                        --------->RAP2.6(1)                                                                                        --------->RRTF1(1)                                                                                        --------->DEAR4(2)                                                                                        --------->ORA47(2)                                                                                        --------->RAP2.3(1)                      --------->HSFB2a(2)                                              --------->ABI4(1)                      <---------HSFB2a(2)                                              <---------At4g35610                     ------>ZmHOX2a(2)                                                 ------>NtERF2                    --------->CCA1(2)                                                  --------->DREB2C(1)                    <------ZmHOX2a(2)                                                  <---------ATERF1(1)                   <---------ARR11(3)                                                  --------->At4g35610                   <---------AGP1                                         --------->SPL7--------->ERF1                   --------->AGP1                                        <---------MYB52(1)--------->ATERF1(1)                   --------->ARR14(2)                                --------->MYB52(1)<---------RAP2.3(1)                   --------->ARR11(3)                                <---------At5g28300<------NtERF2                   <---------ARR14(3)                                -------->P        <---------DREB2C(1)                   <---------ARR14(2)                              <---------MYB52(2) <---------ATERF1(2)                   --------->ARR14(3)                             --------->At4g35610 --------->DEAR3(1)         ==================HOX2a_HOX2a                            <---------At4g35610 --------->ATERF1(2)         <------ZmHOX2a(1)                                     ---------->DOF2       --------->RAP2.3(1)         ===================HOX2a_HOX2a                        --------->SPL7        <---------RAP2.6(2)  <----------DOF2 <---------CCA1(2)                           --------->SPL1(1)      --------->ATERF1(1) ------>DOF2     ----------->ARR10         --------->ARR11(3) <---------SPL1(1)<---------HSFB2a(2) ->At4g35610  --------->ANAC58 --------->ARR14(2)          --------------->AtSPL3   ------>NtERF2 --At4g35610  --------->ANAC58 <---------ARR14(2)        ------------------>SPL14   <---------ATERF1(1) ===============HOX2a_HOX2a    ------->TEIL<---------ARR11(3)<---------SPL1(2) --------->HSFB2a(2)   aaagctttgaaggagcaagcagatctggaagtgaatcttcttcaagatagtctcaacaacatccgtacagctaccgttcgtctcgatgccgccgccgcag  7846300       <------ZmHOX2a(2)      --------->ARR11(3)      <---------ARR11(3)     ------->GAMYB ---->At4g35610 ---->ZAT2 -----At4g35610 -----ZAT2 ---ALFIN1 --At4g35610                                                                <---------YAB1 ->LBD16------>ZmHOX2a(2)                                                 --------->YAB1 >RRTF1(2)                                                               <---------YAB1 >DEAR3(1)                                       ------>ZmHOX2a(1)    <---------YAB1             <--- >RAP2.3(2)          --------->AtMYB61  <-----------GT1            <---------MYB46(3)            <---   ctctcaacgatctctctcttcgacctcaaggttttgtttatttcacctctccttcttcaatttcagcgatggatgattataaaacaatttgaaaattgta  7846400                                                --------->ANAC55(2)                                                <---------ANAC55(2)                                           ----------->HVH21                                        <---------ANAC46                                       <---------ANAC58                                       ----------->RAV1(2)      <---------TOE1(3)                                       <---------ANAC58         --------->DAG2                      <         <---------ANAC58          --------->ANAC55(2)          <---------TOE2(3)                   <         <---------ANAC46          <---------ANAC58      --------->At4g35610                 ========       <---------YAB1              <---------ANAC55(2)   <---------At4g35610                 -------- ---MYB83<---------ANAC58          <---------ANAC58     ------->TEIL                   ----------->GT1 ---MYB46(1)       ----------->HVH21  ------->TEIL   <---------REM1(1)      --------->ARR11(3) ------   ggtaagaagatgcttgtaccactgactgcttctctatacgtgcctgggacacttgatgaagctgataaggttttagttgatattggcactggttacttca  7846500                                  <---------YAB1                        --------->ATHB12                       <---------AHL20(2)                     --------->ANAC55(2) ---------TOE1(3)    <---------ANAC55(2) ---------TOE2(3)  <---------ATHB12  <---------YAB1                 --------->At4g35610 =============================MADS_MADS  <----------DOF2            <---------At4g35610<<<<<<<<<<<<<< ------->AGL15--------------->AGL15<---------ICU4      --------->At4g35610  --------->AHL20(2) --->ATHB12   <---------------AGL15--------->YAB1      <---------At4g35610  <---------AHL20(2)   ----   ttgaggtaatagaaaacttcaataagtaattggattattatgactttgttcttgtgtagctcaagtgttttgctgcatttttatgtagaaaacaatggat  7846600  Previous    Next  AGI:  At5g23290.1    Description:  c-myc binding protein, putative / prefoldin, putative. Identical to Probable prefoldin subunit 5 [Arabidopsis Thaliana] (GB:P57742); similar to hypothetical protein [Vitis vinifera] (GB:CAN63324.1); contains InterPro domain Prefoldin alpha subunit; (InterPro:IPR011599); contains InterPro domain Prefoldin (InterPro:IPR009053); contains InterPro domain Prefoldin alpha-like; (InterPro:IPR004127) Range:  from: 7846084    to: 7847646    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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