Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                     <---------ARR14(2)                                                                                   --------->ARR14(2)                                                                                   <-----------ARR10                                                                           <---------YAB1                                                                     <---------AHL20(2)                                                                     --------->AHL20(2)   <---------ZAT6                     <----------DOF2                                <---------AHL20(2)  <---------ANAC46    <---------AHL20(2)                     --------->TOE2(3)     ------->TEIL      <---------ARR11(3)    --------->AHL20(2)                   ------>MYB83       <---------ANAC46       --------->ARR11(3)   --------->AHL20(2)<---------DAG2      ------>MYB46(1)   <-------TEIL    <---------TOE2(3)   aaaaatttaaaaacaaaaaaaaacttttttagacagagagaccaacttcaatacatttagtttcatgtattttaaataagattagtatcttcgtgttaat  7842600                                           =================bZIP_DOF                                           =================bZIP_DOF                                           <---------O2                                           <---------TGA1a                                          <                                           <---------ANAC58                                         <                                           <---------bZIP60(1)                                      -                                           <---------bZIP60(2)                                      <                                           --------->ANAC55(2)                           <-----------                                           <---------ANAC55(2)                     <---------LBD16  <                                           --------->bZIP60(1)                     --------->ATERF1(1)                                           <---------ANAC46                       --------->ZAT2 <---                                           --------->TGA1a                     --------->ZAT2   -----                                           --------->O2                        --------->At4g35610---                                          <-----------------------TaNAC69(2)   <---------At4g35610---                                     <---------AHL20(2)                    --------->ANAC58     <----                                  ------->TEIL       <------ZmHOX2a(1)     --------->ANAC46   -------                               ----------->GT1   ---------->DOF2           --------->ANAC58 ---------                            --------->ICU4----------->STF1                ------->TEIL   <------ZmHOX2a(1)                          --------->YAB1----------->TGA1           --------->AHL20(2) <------NtERF2 <                       ----------->GT1--------->YAB1----------->GT1<---------AHL20(2)--------->LBD16-               --------->YAB1<---------ICU4<---------ANAC58      <----------DOF2  --------->At4g35610   ttccaaattcaagcttatagtaagttagtaataatgtatataatgacgtggcaaaggataaatgtctctttaaatgcacgtagcagccggaggagtgacc  7842700        <---------ZAT6  ================================================MYC_MYB  ------>MYB83  ------>MYB46(1)  -------->P --------->MYB55(1) ---------MYB59                           ----------->HVH21 ---------MYB46(2)                      --------->TGA1a                              <---------ALFIN1 -------->MYB46(3)                 --------->PCF2                                    --------->DEAR3(1) ---------MYB111(1)               --------->PCF5                                    --------->ANAC46 ------------TaNAC69(2)         <------MYB83------>NtERF2                     --------->At4g35610 ---------MYB55(2)        <------NtERF2 --------->ANAC58                      <---------At4g35610 ------ALFIN1            --------->LBD16<---------TGA1a                  <---------TGA1a ---->MYB46(3)          <---------ANAC46======================================bZIP_DOF --->MYB83            --------->MYB52(1)<---------O2                     <---------ANAC58 --->MYB46(1)        ------>ZmHOX2a(1)  --------->ANAC58                 --------->TGA1a<-----------HVH21 -----MYB59   <---------GLK1(2) <------MYB46(1)                    ---------->DOF2<---------ALFIN1 -->PCF2----------->GT1<---------LBD16  --------->ANAC46           ================bZIP_DOF -->HVH21   <---------AHL20(2) --------->MYB59     <<<<<<<<<TBF1--------->YAB1<---------ZAT2<------NtERF2 ---------MYB111(2)----------->RAV1(2)  --------->O2       --------->LBD16<-----------HVH21<---------DEAR3(2) -------->AtMYB61  <---------At4g35610<---------ALFIN1   <---------LBD16 <---------ANAC58<------NtERF2   cacctacctagtgttaaattctcctgccggagtttggtccccacgcgaccttcttcttcaccggagtaataacgcgcgtgagctccaccgcgtcgggaca  7842800                                                                                      ------->MYC3                                                                                      <-------MYC2                                                                                 --------->ANAC58                                                                               <---------ALFIN1                                                                             <---------ALFIN1                                                                             --------->AtMYB61                                                                          --------->ANAC46                                                                          <---------ALFIN1                  --------->ANAC58                                     --------->PCF2 ------->MYC2                  --------->ANAC58                                   <------ZmHOX2a(1)<-------MYC3                  ----------->GT1                                ---------->DOF2 --------->ANAC58                  ------------------------>ANAC81           <---------ANAC46--------->MYB46(3)                 --------->DAG2                         <---------At4g35610 --------->ANAC46                ---------->DOF2  <----------ID1         <---------ZAT2 --------->ANAC58           --------------->AGL15 ----------->GT1        --------->At4g35610------>NtERF2            -         ------>ZmHOX2a(1)   ---------->DOF2            --------->ZAT2 --------->ANAC58         -----   aaactaatgtcctctcaaaaaagcaaaaaaaaaaagagaaaaaaaaccagagatggtgagctgtgtgaaaaggaccccaccacacccatgtgcttctcct  7842900                            <---------ICU4                            --------->ATHB12                            --------->YAB1                                    <---------TGA1a           --------->ZAT2   <--------HAHB4                                    --------->TGA1a           <---------At4g35610                                                <---------O2           <---------ZAT2  --------->ICU4                                     ===================bZIP_DOF           --------->At4g35610                                            *TSS--------->O2         --------->MYB46(3)<---------ATHB12                              --------->ANAC58         <---------ALFIN1--------->WOX13(1)                              --------->ANAC58      --------->ANAC46 ------------>CBF                              <-----------GT1            ----- ----->ZmHOX2a(1)   ------>ZmHOX2a(1)                                --------->YAB1   ---------->DOF2 ->ZmHOX2a(1)<---------ZAT18-------->ATHB1           ----------->HVH21   --------->ANAC46     -------   tcctgtctccaccagctccctccttctcaatcattagcttcttctcttctcttctctcacagagagagtaatcacaagccaagtgagaaaaagaaaacac  7843000       <------ZmHOX2a(2)                                                         --------->ANAC46      <---------ARR14(2)                                                       --------->MYB52(1)      --------->AGP1                                                    ------>ZmHOX2a(2)           <      --------->ARR14(2)                            --------->YAB1    <---------ARR11(3)            < ---->ANAC46                                     --------->YAB1       --------->ARR11(3)            - -->ZAT6                 <-----------GT1      ----------->RAV1(1)   <---------YAB1     <----------DOF2   taaacccagatcgaaaaccatgtctattaacaacaacaacaacaacaacaacaataacaacgatggtcttatgatctcatcaaacggagctttaatcgaa  7843100                                      <------ZmHOX2a(2)           <---------MYB46(3)        --------->ARR11(3)     <-----------HVH21               <---------ARR11(3)    --------->YAB1               ---------->DOF2    ------->GAMYB            --------->LBD16    --------->AtMYB61       --------->ATERF1(2)   --------->MYB46(3)       --------->DEAR3(1)                                        --------->AHL20(2)  -------->P              --------->MYB52(1)                                  --------->SPL7 ------->GAMYB           --------->AtMYB61                                 <---------ANAC55(2)  <---- ---------MYB55(2)      --------->MYB46(3)                              --------->GLK1(2)    -------- ---------MYB111(2)     <---------MYB55(2)                              --------->ARR14(2)   <------- -------->MYB46(3)      <---------ABI4(2)       ---------->DOF2         <---------ARR14(2)  <--------   caacaaccatcagtcgttgtgaagaaaccaccggcgaaagatcgacatagcaaagtcgatggaagagggagaagaatccgtatgccgattatatgtgctg  7843200                                                                      --------->ANAC58                          <------MYB46(1)                             --------->AtLEC2                          <------MYB83                                --------->ANAC58          <---------At4g35610                                        --------->WOX13(1)             <          --------->At4g35610         --------->At4g35610           ---------->DOF2           ------- -----At4g35610       <---------ZAT2  <---------At4g35610          --------->WRKY18(1)   --------->At4g35610 ->At4g35610         --------->ARR11(3)                           <-----------HVH21      <---------At4g35610 --At4g35610 --------->MYB52(1)     <-----------RAV1(2)  <---------MYB46(3)          --------->YAB1 - ---RAV1(1)<---------MYB52(2)     <-----------HVH21      ----------->GT1            <---------YAB1 <-   ctcgtgtttttcagctaacgagagagcttggtcataagtcagatggccaaacaattgaatggttacttcgtcaagcagagccttctattatagctgcaac  7843300                                                         --------->AtMYB61                                                       ------>NtERF2                                                     --------->ATERF1(1)                                                     --------->MYB46(3)                                                    <---------ATERF1(1)                                                   --------->TCP16(1)                                                   --------->TCP20        --------->REM1(1)                        --------->REM1(2)                                 <-    ----------->GT1                             --------->ALFIN1                     ------>MYB46(1)   <---------------AtSPL3                      <---------LBD16                       ------>MYB83  <-   <---------------AtSPL8                     <---------ANAC46              --------->YAB1<----------DOF2 ---------ARR14(2)                            <---------ANAC58             <------ZmHOX2a(2)       -- ---->RAV1(1)                                 <---------ANAC58            --------->ARR11(3)  <------ -------->ARR14(2)                         --------->ARR14(2)             <---------ARR11(3)  <------ -----ZmHOX2a(1)            <---------At4g35610--------->LBD16       <----------DOF2<---------ALFIN1<   aggaactggtacaactccagcgagtttctcaactgcttctgtctctatccgtggagccaccaattctacttctttagatcataaacccacttctttactt  7843400      ----------->HVH21      --------->TGA2(2)     <-----------HVH21    --------->ANAC58    --------->ANAC46    --------->bZIP60(1)    --------->ANAC58    --------->bZIP60(2)                               -------->HAHB4    <---------bZIP60(1)                               --------->YAB1    <---------ANAC55(2)                              <---------YAB1    --------->ANAC55(2)                              --------->ICU4   --------->SPL7                      --------->At4g35610   <-------TEIL                     <---------At4g35610           <---------ICU4 <---------SPL7             ------->MYC3     <------ZmHOX2a(1) --------->YAB1 <------MYB83--------->ARR11(3) --------------AtSPL8       <-------MYC3   <---------TOE2(3)  --------->ICU4<---------MYB52(1) --------------AtSPL3      <---------ANAC55(1)     --------->YAB1 --------->YAB1   --------->ICU4 ------------->AtSPL3      --------->ANAC55(2)<---------ARR14(2) <---------YAB1  ---------->DOF2 ---ANAC58      <---------YAB1      --------->At4g35610  --------->YAB1    <-------GAMYB  <---------ARR11(3) ---ANAC58  <---------MYB52(1)<-----------HVH21 ----------->GT1<---------ICU4 <------MYB46(1)    ---- ---------MYB46(3)        <-----------------------TaNAC69(2)--------->YAB1<-----------RAV1(1)<-------   ggtggtacgtcaccgtttatacttgggaaacgtgttagagctgatgaggatagtaataatagtcataatcatagttctgttggtaaagatgagaccttta  7843500  Previous    Next  AGI:  At5g23280.1    Description:  TCP family transcription factor, putative. similar to TCP family transcription factor, putative [Arabidopsis thaliana] (TAIR:AT5G08330.1); similar to unknown [Brassica rapa] (GB:ABB97033.1); contains InterPro domain Transcription factor, TCP (InterPro:IPR005333) Range:  from: 7842974    to: 7844278    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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