Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                           ----------->HVH21                                                                    --------->ATERF1(1)                                                                    <------NtERF2                                                                   <-----------HVH21                                                                   ------>NtERF2                                                                   <---------ATERF1(1)                                                                  --------->RAP2.3(3)                                                                  --------->RRTF1(3)                                                                  --------->RAP2.3(2)                                                                  --------->DEAR3(1)                                                                 <------NtERF2                                                                 --------->ERF1                                                                 --------->RAP2.3(1)                  <-----------HVH21                              --------->ATERF1(1)                 <---------ANAC46                                --------->RRTF1(1)       <-----------HVH21                                         --------->DEAR4(2)      --------->DEAR3(1)  ----------->GT1                       ------>NtERF2      ------->GAMYB --------->SPL7                              <---------ATERF1(1)     <------------AtMYB77<---------HSFB2a(2)                   --------->ANAC46     --------->MYB46(3)  --------->HSFB2a(2)                 --------->ANAC58    <---------At5g28300 <---------ETT(2)      <----------DOF2--------->ANAC46 -------->TOE2(3)<---------ANAC58      ---------->DOF2       --------->ANAC58 ---ARR11(3)     <---------ANAC58   --------->TOE1(3)     <---------REM1(2) -->ARR11(3) <-----------HVH21      --------->TOE2(3)    <-----------HVH21            <-------TEIL  -   ttcattaaccgtcgcagtcgcgtccgtcgagaaaaaaaccctaaacccctttacaaacgcttcacgcgccgtcgtctcacagcataggttcgtcatcact  7826200                                                  <---------ANAC46                                        ----------->RAV1(2)                          =======================HOX2a_HOX2a                          ------>ZmHOX2a(2)       --------->ANAC55(2)                 <---------ALFIN1       <---------LBD16               ==================HOX2a_HOX2a      <---------ANAC58     --------->ANAC55(2)               =================HOX2a_HOX2a       <---------ANAC58     <---------ANAC58               ------>ZmHOX2a(1)   <---------GLK1(2)                --------->ZAT14               <-----------HVH21  <---------At4g35610  ----------->GT1 <---------ANAC58            <-       <------ZmHOX2a(2) ========================HOX2a_HOX2a   --------->ZAT18                     --       ===============HOX2a_HOX2a <---------ZAT2  <---------ANAC55(1) ------->TEIL               <---      <-----------HVH21  <------ZmHOX2a(2)       <-------TEIL --------->ANAC58               --------     ------->GAMYB      --------->ARR11(3)      --------->ALFIN1    <---------ZAT14        <---------ANAC58  <---------DOF5.7(2)   <---------ARR14(2)----------->HVH21   --------->ANAC58             <---------ANAC46 -------->DOF5.7(2)     --------->ARR14(2)------>ZmHOX2a(1)   --------->ANAC46             <---------ANAC58   ccgataacgatcacctccttcactccgatcttgtccagcttctcctgaaggtgcgtgttgttaaacgcactgtacgtgctcttctccacgatttcgtctg  7826300                                                                                                    <      <---------At4g35610                                                                           -      --------->At4g35610                                                                          <-      <---------TGA1a                                                                              <-      ----------->RAV1(2)                                                                        <---      <---------O2                                                                               <---      ===============MYC_MYB                                                                     ----      <---------bZIP60(2)                                                                        <---   --------->WRKY38(1)                                                                          <----   --------->WRKY12                                                                            <-----   ----------->HVH21   --------->LBD16                                    --------->AtMYB61   -------  <-----------HVH21   <---------LBD16                  ===============HOX2a_HOX2a            <-------  <---------MYB52(1)  --------->HSFB2a(2)        <-----------HVH21        <---------ALFIN1  --------- --------->At4g35610  <---------HSFB2a(2)       <---------ANAC58     --------->SPL7       <---------ANAC46 <---------At4g35610 <---------LBD16            <---------ANAC58    --------->ARR14(2)    <---------ANAC58 --------->LBD16  --------->GLK1(1)          --------->ARR14(2)     <---------ARR14(2)    <---------bZIP60(2) --------LBD16    <---------GLK1(1)        <---------MYB46(3)      <---------SPL7         <---------ANAC58 ------->SPL7   --------->ATHB12       --------->ATHB12<------ZmHOX2a(1) --------->MYB46(3)--------->LBD16 --------HVH21<---------WOX13(1)<---------LBD16 <---------ANAC46  --------->DEAR3(1)--------->ZAT2<-- --->RAV1(2) <-------GAMYB  --------->ATHB12 <---------ARR14(2)------>ZmHOX2a(2)  --------->LBD16<---   gtccggtgacctggcgattgatttccgggatgatttcggaatcagtggttccgtcgaggattagatcgccgttccaccactctccgagcatgccgtggtc  7826400      <---------GLK1(1)     <---------ARR14(2)     --------->ARR14(2)  <---------ANAC46 <------MYB83 <------MYB46(1) ---------MYB46(3) -------->ALFIN1        --------->REM1(2) --------MYB52(1)    <------NtERF2                         --------->ETT(2) -------P            <---------ANAC58                 <---------At4g35610 ---MYB46(1)         <---------ANAC58                 --------->At4g35610 ------DEAR3(2)      <---------ANAC46              <------NtERF2 ----->MYB55(2)     ------>NtERF2                  <---------At4g35610                  <------MYB83 ------MYB46(3)    <---------ANAC58               ------>NtERF2<---------MYB46(3)       <---------MYB46(3) -----DEAR3(1)     <---------ANAC58               <---------DEAR3(2)                    <------MYB46(1) ----ORA47(1)      <---------ANAC46              <---------DEAR3(1)                    <---------AtMYB61 ----->AtMYB77  --------->ALFIN1 --------->LBD16 <---------At1g77200                 --------->ARR14(2) --MYB46(3)   <---------MYB46(3) <---------LBD16<------NtERF2 <---------AtMYB61      <---------ARR14(2) >ALFIN1    <-------GAMYB      <---------LBD16  --------->RAP2.6(3)        <----------DOF2 -----GAMYB<---------MYB46(3)<---------ARR14(2)<---------ATERF1(1)<---------MYB46(3)--------->ATHB12 ---MYB83 <---------TOE2(3)  --------->ARR14(2)<-----------HVH21 --------->ALFIN1   <------ZmHOX2a(1)   ggttggggatttgtggttgtggcgcgtgaagaatacggggattgaagcgcgtcggcagatgtcgatggtggtgagagcgttttggaggattggttcagcc  7826500                                                                             --------->HSFB2a(1)                                                                            <---------TOE1(2)                                                                            <---------TOE2(2)                                                                            --------->SPL7                                                                          <---------SPL7                                                 <------ZmHOX2a(1)      --------------->AtSPL3                                    <---------ZAT2                      <---------------AtSPL3                                    --------->At4g35610           <---------ANAC46                                    --------->ZAT2<---------ARR14(2)    --------------->AtSPL8 ------                                    <---------At4g35610           <---------ANAC58             ------                                 ----------->ARR10--------->ARR14(2)   <---------ANAC46--------->YAB1                         ----------->TGA1      <---------TOE2(3)  <---------ANAC58<---------HSFB2a(2)                         ----------->HVH21 <----------DOF2     <----------DOF2    --------->HSFB2a(2)   atagagtagaagtgattctgcatatcgatgacgagaagagctgcgattttaggatttggctctcgctttcgtgtctcgtacgttctcgatgatgaagaag  7826600                                        <---------AHL20(2)                                       --------->AHL20(1)                                       <---------ARR11(3)         <------NtERF2                 --------->ARR11(3)         --------->At5g28300           <---------AHL20(1)        <---------MYB46(3)            --------->CCA1(2)       <---------DEAR3(1)            --------->ARR11(3)       <---------ANAC46              <---------ARR11(3)       <---------DREB2C(2)           <-----------------AGL3                            <---------AHL20(2)    <-----------RAV1(1)      <---------DEAR3(1)         <------ZmHOX2a(1)             --------->AHL20(2) <---------ARR14(2)          ==================================HOX2a_HOX2a          --------->AHL20(2) --------->ARR14(2)       --------->ATHB12          ---------->DOF2            ------------>CBF --->ANAC58   *TSS ------->TEIL --------->ALFIN1  --------->ANAC58       <------------CBF --->ANAC58  --------->ICU4  ------>ZmHOX2a(2)    --------->ANAC58      --------->ATHB12            <   ccatttctggcggtgaagatgaatctcttgatcggtggagatatatttgggaacgaaaggatttagtcactcacttattgggccaatataaaatgggcct  7826700   --------->ANAC58          <------MYB46(1)   --------->ANAC58          <---------MYB46(3)   ===================================MYC_MYB   --------->ANAC46      <-----------RAV1(1)   <---------O2 <---------ICU4   <---------TGA1a      <---------TOE2(2)                                                      ------   --------->O2 --------->YAB1<-------GAMYB                                                  <-------   --------->TGA1a <---------WRKY18(1)                              ----------->GT1  <-----------GT1 ---------ZAT18--------->ICU4<------MYB83 <---------YAB1      ---------->ID1    <----------DOF2<-----   agcccacgtatgatgtaatcttgacctatgttggttatacaggtataattcaatgtgtatatttgttgtatagtataatgttctttgttacatttgcagg  7826800                                  ------->TEIL                                            --------->At4g35610                         --------->ARR14(2)                <---------YAB1    <---------ANAC58                         <---------ARR14(2)               <---------TOE1(2)  <---------ANAC46        --------->ARR14(2)    <---------------AtSPL8      <---------TOE2(2)  <---------ANAC58        <---------ARR14(2)--------->CCA1(2)  --------->ARR11(3)             <---------STY1(2)  ------ --->At4g35610   ---------->DOF2  <-------TEIL ------>ZmHOX2a(2)            --------->STY1(2)  <----- ----RAV1(2)  <---------------AGL15          <---------ARR11(3)     <---------ARR11(3)    <---------At4g35610 ----At4g35610<----------DOF2 --------------->AtSPL8 ------->TEIL<----------DOF2          --------->ZAT2   tgaacacgagtacctgctctaaagagggatatgatgtacatatatatgatctatgaatcttatgtttctttatcttctagcttgtgttgaacagcttcca  7826900                                                                                                  <--                                                                                                  ---                                                                                              -------                                                                                              ------>NtERF2                                                                                             --------                                                                                             --------                                                                                             --------                                                                                             --------                                                                                             --------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                   <-------GAMYB            ---------                                                      <---------At4g35610                   ---------                                                      --------->At4g35610                  <---------ATERF1(1)                                                      --------->ZAT2                       --------->ZAT2                                                     <-----------RAV1(1)                   <---------ZAT2                                                  --------->ARR14(2)                       --------->At4g35610                                                  <---------ARR14(2)                       <---------At4g35610                                         <---------At4g35610      <---------ZAT6 --------->DAG2------                                  ------->TEIL    <---------ARR11(3)            ---------->DOF2<----- --->HSFB2a(2)         <---------------AtSPL8     --------->ARR11(3)<---------MYB52(1) <------NtERF2 ----HSFB2a(2)       <---------ATHB12   ------>ZmHOX2a(1)------>NtERF2     <---------TOE2(3)---------   caagttggagtaacattgctccaatgaagtaccatgtaactcctgctaacaatatctgctgccatggactgttaactatggataaagccagcgagccgcc  7827000     <---------MYB46(3)    <---------------------WRI1 -------ARR14(2) ------>ARR14(2)       --------->ARR14(2) -->LBD16              <---------ARR14(2) ->RAP2.6(2)          --------->ATERF1(1) ->ATERF1(2)          <------NtERF2<---------ANAC46 ->RAP2.3(3)         ------>NtERF2 <---------ANAC58 ->DEAR3(1)          <---------ERF1<---------ANAC58 ->RAP2.3(2)         <---------ATERF1(1) >ATERF1(1)          <---------RAP2.3(1) >RAP2.6(1)          <---------DEAR4(2) >DEAR3(2)          <---------RAP2.3(2)                                                         <---- >RRTF1(1)          <---------RAP2.3(3)                                                 <----------DOF2 >MYB46(3)          <---------DEAR3(1)<------MYB83                                 <---------HSFB2a(1) >ERF1<-------GAMYB <---------RAP2.6(2)                                            <---------HSFC1(2) >DEAR4(2)         --------->ATERF1(1)<------MYB46(1)                              --------->HSFC1(2) --->RAP2.3(1)---------->CDC5      <---------AtLEC2                                --------->HSFB2a(1) -NtERF2   --------->At4g35610 <---------ANAC58                        <-----------------AGL1  ------ >RAP2.3(1)<---------At4g35610 <---------ANAC58     --------->YAB1     <-----------------AG   -------   gatatggtcgttgagctcagaggcggctctgtaacttgcttggtactgaaccaagaatactgctactatggctgtcccaattggaaatttctttatcctg  7827100  Previous    Next  AGI:  At5g23230.1    Description:  NIC2 (NICOTINAMIDASE 2); catalytic/ nicotinamidase. similar to NIC3 (NICOTINAMIDASE 3), catalytic/ nicotinamidase [Arabidopsis thaliana] (TAIR:AT5G23220.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44425.1); contains InterPro domain Isochorismatase hydrolase; (InterPro:IPR000868) Range:  from: 7825885    to: 7826614    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g23235.1    Description:  pseudogene, antisense mRNA to genes At5g23230 and At5g23240, blastp match of 34% identity and 7.4e-17 P-value to OMNI|TM0133 isochorismatase-related protein {Thermotoga maritima MSB8} Range:  from: 7826031    to: 7828727    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g23240.1    Description:  DNAJ heat shock N-terminal domain-containing protein. similar to DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G42750.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44422.1); contains InterPro domain Heat shock protein DnaJ; (InterPro:IPR003095); contains InterPro domain Heat shock protein DnaJ, N-terminal; (InterPro:IPR001623); contains InterPro domain Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609); contains InterPro domain 4Fe-4S ferredoxin, iron-sulphur binding; (InterPro:IPR001450) Range:  from: 7826735    to: 7828727    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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