Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                  <---------ARR11(3)                                --------->ARR11(3)                                --------->AHL20(2)                                <---------AHL20(1)                                --------->AHL20(1)                     --------->YAB1                                <---------AHL20(2)                    <---------YAB1                             --------->AHL20(2)                     <---------ICU4                        <---------MYB52(1)                          -------->HAHB4                       ----------->GT1                             <---------ATHB51                       <---------RAP2.6(3)                         --------->ICU4  --------->SPL7      ----------->GT1    --------->ATHB51     --------->TOE2(3)             <------ZmHOX2a(1) -------->TOE1(2)  --------->DEAR3(1)    <---------ICU4      ----------->GT1     <---------YAB1 -------->TOE2(2)<---------At5g28300  --------->YAB1        <---------TOE2(3)   <xxxxxxxxxxxxxxxxxxxsmallRNA(si3) --TOE2(3)    <-----------HVH21--------->AHL20(2)     <---------YAB1--------->YAB1        <---------TOE2(3)   agcctacgatatacttagtcacagccgttaaaaatatatttcataatttccaagttttgataaatgttaattatgataatgtgatgagagtttaggaatt  7801100                                    <------ZmHOX2a(1)                              -------->HAHB4                              --------->ATHB12                       ------>ZmHOX2a(1)                              <---------ICU4                        --------------->AGL15                              --------->YAB1                        <---------------AGL15                             <---------YAB1                         --------->TOE2(3)                             --------->ICU4                         --------->TOE1(3)             ---                           --------->YAB1                      <---------HSFC1(2)                 <--                          --------->ICU4                       --------->HSFC1(2)                 ---            <-----------GT1<---------ICU4                      --------->HSFB2a(1)               ----        <---------YAB1  --------->YAB1      <---------TOE2(2)  <---------HSFB2a(1)               ----   ----------->GT1--------->YAB1   <---------YAB1          ----------->GT1                -----------   ggaagaagttatatttactctcataagaataatgattaggattacataggtttatatagtatagaaatttccttaactagatgaatacatatatgtaaaa  7801200                                                       <---------CCA1(2)                                               ------->TEIL          <---------ICU4                       <---------ARR14(2)    <---------CCA1(2)                          --------->ARR14(2) ------>ARR11(3)                              <---------CCA1(2)         <-----------GT1 -------ARR11(3)                          ----------->GT1             --------->AHL20(2)        ----- ------>AHL20(1)                      --------->AHL20(1)       --------->HSFB2a(2)           <------- ----->RVE1(1)                        <---------AHL20(1)       <---------HSFB2a(2)           <------- ----->CCA1(1)<-------TEIL            --------->ARR11(3)    ------>ZmHOX2a(1)          --------->ARR11(3) >GT1  --------->YAB1   ------------>CBF<------------CBF<---------ARR11(3)        ---------->DOF2   tatcttgtatcataagttcataactatacaatatttgatatatattgtgaatcttctatatccttctacaaattatacattaccaaaaggaacttgaggt  7801300                                                      <---------AHL20(2)                                                     --------->AHL20(2)                                         --------->WOX13(1)                                        --------------->AGL15                                        <---------------AGL15        ----------->GT1                ----------------->AGL1 <---------bZIP60(2)        <---------MYB46(3)             ----------------->AGL2 <---------ANAC46        --------->MYB52(2) <------------CBF          <---------AHL20(2)     ------------>MYB.PH3(2)           ----------------->AG   <---------ANAC58 ---->GLK1(1)            <---------YAB1----------------->AGL3 <---------ANAC58         --------->WOX13(1) --TOE1(3)      ----------->GT1        ------------>CBF  <---------ICU4              ------------>CBF --TOE2(3)    ---------->DOF2   ------------>CBF <------ZmHOX2a(1)                  <-----------HVH21   ttccaagagtttgttacaaagttatttgttattgcccaattaccaattacaggaattaaatatgacttggaagttggaaccctaagcgtcaattaccaag  7801400                                                                                          --------->LBD16                                                                                          -----------                                                                                         --------->RAP2.6(2)                                                                                        <---------LBD16                                                                                       --------->ZAT2             ------>ZmHOX2a(1)                                                         --------->At4g35610            --------->TOE2(3)                                     <---------WOX13(1)--------->At4g35610       <---------AHL20(2)                                        <------------CBF   <---------At4g35610     ----------->TBP       ---------->DOF2              >>>>>>>>>TBF1          --------->ANAC58   <-----------TBP--------->DAG2                 --------->At4g35610           --------->ANAC58 --------->AHL20(2)    --------->MYB52(1)        <---------At4g35610          ------>NtERF2<------NtERF2 <-----------TBP ---------->DOF2                ------->TEIL    --------->ATHB12   --------->ANAC46   agtttatatataatcctcaaaaagctaacaaaaggagaagaagagtcttgcatctgaagaagaagttgattgaaatatggcacctaagcagccggaaaaa  7801500                     <---------At4g35610                  <------NtERF2                  --------->ATERF1(1)                  --------->TGA2(2)                 <-----------TGA1                 <-----------HVH21                --------->TGA2(1)                <---------ANAC58                --------->bZIP60(1)                <---------ANAC46                <---------bZIP60(1)                <---------ANAC58        ------>ZmHOX2a(1)       --------->TOE1(2)    --------->ARR14(2)              ---------->DOF2    --------->GLK1(2)--------->At4g35610    <---------ARR14(2)<---------ALFIN1   --------->GLK1(2)                                   <------- >GT1  --------->TOE2(2)         --------->LBD16              ------->TEIL               --------->ZAT6   atcgagaatcctccgatggcgtcagcaccttcatccgaaaaagagtctggttctactgaaaatgaatatggttcttctggtgaagagactaactcttcgg  7801600                                                                                           ----------                                                                                           <---------                                                                                          <----------                                                                                     --------->At4g35610                                                                                    <-----------ARR10                                                                                    --------->GLK1(2)                                          <---------CCA1(2)        <----------DOF2  --------->ARR14(2)                                         <---------MYB52(1)    <---------CCA1(2)    <---------ARR14(2)                                        <---------DAG2   <---------ARR11(3)<---------TOE1(3)                                --------->ANAC58         --------->ARR11(3)<---------TOE2(3)    ------->TEIL                --------->ANAC58    --------->WRKY18(1)<----------DOF2   <----------- --LBD16                       <---------ICU4 <----------DOF2  ---------->ID1      <---------GLK1(2)   atgatgaacatgaagaggctagagacaatgtcataagcactcccttatcttttggtcaagagctcgtctctttctttaaggttgagaatctgacttattt  7801700                                        ---------->DOF2                                       <---------WRKY38(1)                                       <---------WRKY12      <---------REM1(1)          --------->CCA1(2)             ----------->GT1   --------->ICU4               --------->ARR14(2)            <---------AtMYB61 ----->AGL15                    <---------ARR14(2) ---------->DOF2----------->GT1              ------ ------AGL15       <---------ANAC58    <---------WRKY45   <---------ANAC58              <---------ANAC58 -------AGL1       <---------ANAC58   --------->WRKY18(1) <---------ANAC46              <---------ANAC58 ------AG   ---------->DOF2  <---------------------WRI1   <---------ANAC58            <---------YAB1   gggtattgatgaagcaaagtggattgcatactgggatatggtcaaagatggaccaaagaagcgtgaggttgaaaaacaattgaagaagatgcttgctatg  7801800                                                                                           --------->ALFIN1                                                                                         <------MYB46(1)                                                                                         <------MYB83                                                                                        --------->MYB46(2)                                                                                        --------->MYB111(1)                                                                       ------->TEIL<--------P                                                                    --------->ANAC58    --------->MYB111(2)                                                                    --------->ANAC58--------->MYB111(1)                                                              --------->ANAC58    <---------MYB52(1)                    <------ZmHOX2a(1)     <---------At4g35610 --------->ANAC58  --------->HSFB2a(2)              --------->YAB1            <--------P        <-----------GT1       <---------HSFB2a(2) -       <----------DOF2    --------->ARR14(2)            <---------AHL20(2)     <---------ANAC46     < --->AtLEC2  <---------YAB1      ---------->DOF2        --------->AHL20(2)    <---------LBD16    ----   caaatggagctttttatgatgaggactggatttacaaaagaggtagctactgtgttatttaaacaagacaacgcatcttcttcgggtaagtaggtggaag  7801900                                          --------->ATHB12                                         <---------AHL20(2)       <----------DOF2                                         <---------YAB1      <---------HSFB2a(2)              <------        <-----------RAV1(1)           <---------DAG2         --------->HSFB2a(2)             <------- -------->ALFIN1                      <----------DOF2    <----------DOF2                  <---------- ---------MYB46(3)                  <---------At4g35610 <---------ANAC58          --------->ANAC46 -- ----->ARR11(3)       <------------------------ANAC81   <---------ANAC58      <-----------GT1<-------   agctggtggtatgttgctagaatgtgtttgaattttgcagctttttattggtgttttggctttctagactttttttttgtttacaatccattttagcttt  7802000  Previous    Next  AGI:  At5g23180.1    Description:  similar to transcription regulator [Arabidopsis thaliana] (TAIR:AT4G01260.1) Range:  from: 7801477    to: 7801893    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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