Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                         --------->ZAT6                          ------                                                 <---------ZAT6                              <-------           <----------DOF2                <---------GLK1(2)    <----------DOF2               -------- ---------YAB1 --------->AHL20(2)   --------->ANAC46 <<<<<<<<<<<<<<<<<LFY   <----------DOF2 <--------   ttctgatttgcctctttttatatagaagaagttagaacacatcatattcttgtgttaacactggtctttgattatgctctttgaattagggacagaatct  7785400        <---------YAB1    <----------DOF2   ------>ZmHOX2a(2)  <------ZmHOX2a(2)  <---------RVE1(1) <---------ARR14(3) <---------ARR14(2)                         --------->At4g35610 --------->ARR14(2)                         --------->ZAT2 --------->ARR14(3)                 <---------ANAC58 --------->ARR11(3)                 <---------ANAC58                                     <---------YAB1 <---------ARR11(3)                 <---------ANAC46                                    --------->AHL20(1) --------->AGP1                <---------ANAC58                       <---------ANAC58  <---------AHL20(2) --->YAB1                      <---------ANAC58                       <---------ANAC58  <---------AHL20(1) --ARR11(3)          --------->SPL7---------->ID1           <---------ANAC58           --------->YAB1 ->GLK1(2)       <---------------AtSPL8     <---------ZAT2  <---------ANAC58<---------MYB52(1) -GLK1(2)--------->YAB1  --------->ALFIN1   <---------At4g35610 <---------ZAT6         --------->AHL20(2)   taagatctttatgaaaattcttgtacggtgttgtcttgtcgtgttgagctgagccttcaattgctagtgtttgcttctgttactctgaattatatttgga  7785500                                                                                        --------->YAB1                                                                                     --------------->AGL15                                                                                <------MYB46(1)                                                                                <---------MYB46(3)                      <---------AHL20(2)           ------>ZmHOX2a(1)            <------MYB83             ---------->DOF2          ----------->GT1                       <-----------RAV1(1)  ----         --------->YAB1         --------->YAB1<-----------GT1           --------->ARR11(3)  ---------     --------->ZAT6   --------->AHL20(2)     <---------AHL20(2)       <---------YAB1 <---------------AGL15   caatctcactctaataaaagttttttaaatactagcagaattgttaatttatcctatggtttacatgtttatatgattttgttggttctataatgtgtaa  7785600                                                            ----------->GT1                                                          ----------->GT1                                                        ---------->DOF2                    <-----------GT1                --------->REM1(2)                    ---------->ID1                --------->ALFIN1           <------ZmHOX2a(1)                   <-----------GT1               <-------MYC3          ---------->DOF2              <---------AHL20(2)                 ------->MYC3       --------->ANAC58         <------- ----->ICU4<---------ARR11(3)   ---------->DOF2 <---------ANAC46    --------->ANAC58     --------->MYB46(3) -->GT1  <---------YAB1<----------DOF2<---------YAB1   <------ZmHOX2a(1)  <---------------AtSPL8   aaatggaaaacatgatttttttttccttttttttaaaagtataaatggaaacgtgtaggaaagtgtaaacaagaaaagaggacataaatgacccaatgac  7785700            <-------GAMYB           <------MYB46(1)                                 ----------->GT1      <---------AHL20(2)                                  ----------->GT1     <---------AHL20(1)                                 <------------CBF     --------->AHL20(2)                            ----------->GT1     --------->AHL20(1)                           <---------TOE2(3)     --------->ARR11(3)                           <---------TOE1(3)          <----------DOF2     <---------AHL20(2)                           --------->MYB59           --------->TOE2(3)     <---------ARR11(3)                           --------->DAG2     ==============================HOX2a_HOX2a  --------->YAB1                            --------------->AGL15    <------ZmHOX2a(1)  <---------AHL20(2)                        <---------------AGL15   ----------->GT1  --------->AHL20(2)                       <-----------------AGL1   <----------ID1 --ATHB12  <------MYB83 <------ZmHOX2a(1)  <-----------------AG    <---------TOE2(3)        ------>ZmHOX2a(2)   ttaataatatatttggttgagacttaggagtagtgagattaaactacaaaataaggtaaattggaaaataaggaaaaacctttttcgatttcgatctctc  7785800                                  ------>NtERF2                                  ----------->RAV1(1)                                  --------->ORA47(1)                                 --------->RAP2.3(3)                                 --------->At1g77200                                 --------->DEAR4(1)                                 <---------ETT(1)                                 --------->DEAR3(1)                      ----------->GT1            ------>MYB46(1)                    ----------->GT1              ------>MYB83                 ---------->DOF2 --------->DREB2C(2)             <------------CBF   --------->RAP2.3(1)                                                 -       --------->DAG2 <----------ID1  *TSS     <---------MYB59                         <----------DOF2      ---------->DOF2----------->GT1 ----------->RAV1(1)                        <-----------GT1   ---   cttggtgaaaaaggaaattgaaaggggaaaaaacgccgacaacagtaaaccaaacttctcacaaaaactccttggaaagttttcaccttctttcagccct  7785900                                                                                                    -                             <---------CCA1(2)                            --------->TGA1a   <--------                      --------->DEAR3(1)                                  --------->ANAC46  <--------                      --------->RAP2.6(2)                                 <---------O2      ---------                      ------->GAMYB                          ----------------------->TaNAC69(2)    --                     --------->MYB46(3)                      <----------DOF2 <---------DEAR3(1)    <-                    <---------ATERF1(1)                      =======================bZIP_DOF<-------- ------>GAMYB       ------>NtERF2              --------->WOX13(1)         --------->O2      <-------- ----->P          ----------->HVH21          <------ZmHOX2a(2)            --------->bZIP60(2)     ---   aaccccatcgtctctctctcgcgaccgcctcatctctctctgtctggatcaatctcgctctctctttctctcggctacgtcgctgtttctcgtttcgtga  7786000      <-----------HVH21   --------->ZAT2   --------->At4g35610   <---------At4g35610   <---------ZAT2 -------->LBD16 -ANAC46                                                      <------ZmHOX2a(1)                     < -ANAC55(2)                                      --------->YAB1                                     < >ANAC55(2) --------->LBD16     <---------ZAT2  --------->KAN4(1) --------->ARR14(2)              <-- ------->ANAC55(2)            <---------ZAT18   <---------KAN4(1) <---------ARR14(2)    <---------ANAC46 --------ANAC55(2)  --------->TOE1(3)    --------->LBD16  --------->ARR14(2)            <---------ANAC58 -ANAC58    <---------At4g35610 <---------At4g35610       <---------ARR14(2)            <---------ANAC58 -ANAC58   --------->ANAC46 --------->At4g35610<---------KAN4(2) <------ZmHOX2a(1)<---------YAB1 <--- --->ZmHOX2a(2)     --------->TOE2(3)  <---------LBD16<---------LBD16      --------->GLK1(1)     <---   tccgtagctgtctccgctactaccttaatcagcgagcttcttccggtggaataatcttcggataggaggaatcggagaattcttctaattgggtgtctgg  7786100                          --------->ALFIN1                        <---------ANAC58                        <---------ANAC46                        <---------ANAC58                        <------MYB46(1)                        <------MYB83                       <---------MYB46(3)                       --------->MYB55(2)           --------->ANAC55(2)           --------->ANAC55(1)                                                                     --           <---------ANAC55(2)                                                          ---------->DOF2           --------->ANAC58                                                         <---------ANAC58 ------MYB83         <---------MYB52(1)                                             <---------ANAC58 ------MYB46(1)     <-------GAMYB                                               ------>ZmHOX2a(1)  -- ------P   --------->ANAC58                        <---------TOE1(3)          ----------->RAV1(2) --- ------ANAC46      <-----------RAV1(1)             <---------TOE2(3)          <---------ZAT2  <------ZmHOX2a(1) ----GAMYB --------->ANAC46          <---------ANAC46          --------->ARR11(3)   <---------ANAC46<   gttggattggaatacgtaattctgttgggtgttccaatttcgcgttcaaaattagggtttatagaggtctcgcctatggctcctgggcgtaaaagaggag  7786200                                                                                               <-----                                                                                               ------                                                                                              -------                                                                                              <------                         <------MYB46(1)                                                    ---------                         <------MYB83                                <---------AtLEC2       <--------                         <---------MYB46(3)                          <---------ANAC58       <--------HAHB4                      <---------At4g35610                            <---------ANAC58  <XXXXXXXXXXXXX                      <---------ZAT2                         <---------ANAC58          <-------GAMYB                      <-------GAMYB                          <---------ANAC58         <---------ANAC58          --------->ANAC58                                 xxxxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)          --------->ANAC58          --------->ARR11(3)  ---------->DOF2   <---------ANAC58 --------->ICU4        ---------->DOF2<---------MYB52(1)     --------->ANAC58      --------->ZAT2    <---------ANAC58 ------->ANAC58      <---------MYB46(3)       --------->ANAC46      <---------ZAT2   <-------TEIL ------->ANAC58      --------->MYB55(2)       --------->ANAC58   <---------ANAC58 --------->ZAT2 ------>ZAT18     ------------>AtMYB77------>ZmHOX2a(2)<---------WRKY12   <---------ANAC58 <---------YAB1 ---------ZAT2---------->DOF2 <---------HSFB2a(2) ---------->DOF2<---------ANAC58 <---------ZAT2 <---   cgagcaaggccaaagccaaagggcagttggttctcggtgatctggttctcgccaaagtcaaaggcttccctgcttggcctgccaaggtgcgttatcatta  7786300  Previous    Next  AGI:  At5g23140.1    Description:  CLPP2 (Clp protease proteolytic subunit 2); endopeptidase Clp. Identical to ATP-dependent Clp protease proteolytic subunit 2, mitochondrial precursor (CLPP2) [Arabidopsis Thaliana] (GB:Q9FN42); similar to CLPP5 (NUCLEAR ENCODED CLP PROTEASE 1), endopeptidase Clp [Arabidopsis thaliana] (TAIR:AT1G02560.1); similar to unknown [Populus trichocarpa] (GB:ABK92906.1); contains InterPro domain Peptidase S14, ClpP; (InterPro:IPR001907) Range:  from: 7783741    to: 7785500    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g23150.1    Description:  HUA2 (ENHANCER OF AG-4 2). similar to PWWP domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G08230.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42016.1); similar to Putative PWWP domain-containing protein [Brassica oleracea] (GB:AAV25878.1); contains InterPro domain PWWP (InterPro:IPR000313); contains InterPro domain Regulation of nuclear pre-mRNA protein (InterPro:IPR006569) Range:  from: 7785838    to: 7792492    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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