Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                    <---------AHL20(2)                                                                             <---------AHL20(1)                                                       <---------ANAC55(2)   --------->ARR11(3)                                                       --------->ANAC55(2)   <---------ARR11(3)            <---------YAB1                  <---------AHL20(2)               <---------AHL20(2)      <---------YAB1                       <---------AHL20(1)                --------->AHL20(2)      <---------WOX13(1)               <---------AHL20(2)                    --------->AHL20(1)    ----------->GT1                    --------->AHL20(1)                   --------->AHL20(2)    -------->HAHB4                     --------->AHL20(2)              --------->YAB1      --------->TOE2(3)    --------->ATHB12                   <---------AHL20(1)         --------->TOE2(3)     <-----------GT1   --------->ICU4               --------->ZAT6   --------->AHL20(2)   <---------YAB1    <---------AHL20(2)   <---------ATHB12        <----------DOF2 --------->AHL20(2)   <---------TOE2(3) --------->AHL20(2)-   <---------YAB1          <---------DAG2  <---------AHL20(2)  <-----------GT1<---------AHL20(2)   --   atgaaatgattaatatgatatatgtctaactttatctctaattaattaatttttaatatgtgatttaacattatcaaaatatatttatatttacattagc  7757900                                                                                         --------->At4g35610                                                                                         ----------->RAV1(2)                                          ----------->GT1                          <-------TEIL                                          <---------ZAT6                       <---------AHL20(2)                                        ----------->GT1                        <---------ICU4                                      --------->ZAT14  <---------ZAT18        --------->AHL20(2)                                --------->TOE2(3)      --------->ZAT18      --------->YAB1                                <----------DOF2        <----------ID1      <---------YAB1<---------At4g35610 -------->At5g28300         --------->REM1(1)   --------->YAB1            --------->AHL20(2) --------->GT1         <-----------GT1<---------ZAT14 --------->ALFIN1    <---------AHL20(2)       <-   tcggtaaattttctgtgttttggattaactacaactttagtatagtgtaattagaagtggacaaatatgtataaattttaataaatacatcatctgaact  7758000                                                                                                -----                                                                                       --------->MYB52(1)          ------------>CBF                                                           --------->MYB46(3)         <-----------GT1                     --------->ANAC58                       ------------>CBF   <----------DOF2                           ----------->GT1              <-----------GT1    <------- --------CCA1(2)  --------->TOE2(3)          --------->ANAC58<------------CBF      <-----------GT1  -   tatctctttattttcaatattcttaataggccttgaattagaggcccaagtaaaaatgtcgaatattgtttttttttcacatttgtaacaatcggcttta  7758100                                                                               ------>ZmHOX2a(2)                                                                             --------->ARR14(2) -----                                                                             <---------ARR11(3) <----                             ----------->GT1                                 --------->ARR11(3) <----       <---------AHL20(2)  ---------->DOF2                  <---------ALFIN1 <---------ARR14(2) ----- ---->YAB1             <----------DOF2   ---------->DOF2   <------NtERF2   ----------->ARR10<-------- ---DOF2              <---------------AGL15 --------->HSFC1(2)       <---------HSFB2a(2) --------->TOE1(3) --------->DOF2       --------------->AGL15 <---------HSFC1(2)       --------->HSFB2a(2) --------->TOE2(3)   ataaaagttttaattctgccatttcctttcaaagtaaaaactaaaaagcttcccttgaggcaccacttcttctagagtcgatcttcttcaaccttgactc  7758200       --------->SPL7       --------->ABI4(2)    <------MYB83 --------->GLK1(2)                                                           --------    <------MYB46(1)                                                                         ---------    <---------DEAR3(2)                                                                     <---------TOE2(3)   <---------MYB46(3)                                                                      <---------TOE1(3)   <---------DEAR4(1)                                                                     --------->MYB52(1)   <---------DEAR3(1)       ------>ZmHOX2a(2)        --------->ATHB12               ------->GAMYB   <---------DREB2C(2)      --------->YAB1          <-------TEIL                 ----------->RAV1(1) ---->TGA1a     --------->ARR14(2)              --------->ARR11(3)             <---------At4g35610 -----TGA1a     <---------GLK1(2)               <---------AHL20(1)             --------->At4g35610 -----O2 <---------PCF2 <---------YAB1       <-----------TBP                --------->At4g35610 <---- ---->O2----------->HVH21 <---------ARR11(3) --------->AHL20(2)             <---------At4g35610 ----- -WRKY18(1)     <---------ARR14(2)         <----------DOF2             <----------DOF2    <---------DOF5.7(2)   gtgagtcggtgcgacccagattcttcatgatcgtaatctcatcttctttatatattcatgggggtttgatcatctttctgcagcaacagagataacgttt  7758300                                                                                               <-----                                                                                              -------                                                                    <------MYB83            ---------                                                                    <------MYB46(1)      --------->ANAC58                            <---------ARR14(3)                  <---------HSFB2a(2)      --------->ANAC58                            --------->ARR11(3)                  --------->HSFB2a(2)   --------->LBD16                            <---------GLK1(2)         ----------->HVH21              <---------HSFB2a(2)                            --------->ARR14(3)       --------->DEAR3(2)              --------->ANAC46                      --------->HSFC1(1)     --------->ATHB12  <---------LBD16    <---------ARR14(2)                      <---------HSFC1(1)    <-------TEIL    --------->ARR14(2)    --------->ARR14(2) ->TOE2(3)   <-----------GT1<---------ARR11(3)    <-----------GT1   ----------->GT1  --------->HSFB2a(2) -->GT1   --------->ARR14(2)<---------ARR14(2)   ----------->HVH21 <---------AtMYB61<---------LBD16-- -----AHL20(2)        --------->HSFB2a(2)  <--------P--------->MYB46(3) <---------AHL20(2)  <-------- ---->AHL20(2)        <---------HSFB2a(2)----------->GT1    <---------ARR14(2)<-----------GT1>>>>>>>>   aattcgaagatggattcacttcttctcgaagattttgggcagaaggttgatttgacccgacgaattcgggaggttttattgaactatccggaaggaacca  7758400                                      <---------At4g35610                                    <------NtERF2                                   --------->LBD16                       <-------TEIL                                  --------->DEAR3(1)                     ----------->HVH21                                 <---------------------WRI1             <-----------HVH21                                 <------NtERF2                        <------NtERF2                                 <---------LBD16                     ------>NtERF2                                ------>NtERF2                        <---------MYB46(3)                                <---------RAP2.3(1)                 <---------ANAC46        <------ZmHOX2a(1)      <---------bZIP60(1)                 <---------LBD16           <-------   <----------DOF2           <---------TGA2(2)                     <---------MYB52(1)       <-------- ----ALFIN1                 ----------->HVH21                    <---------DEAR3(1)     <----------DOF2 -->MYB46(3)                ----------->TGA1---------->DOF2   <---------WRKY18(1)      --------->MYB52(2) >ARR14(2)                <---------At4g35610                --------->WRKY38(1) <---------ANAC46 ------->ZAT14            --------->At4g35610                ----------->HVH21 <-----------HVH21 -ARR14(2)            XXXXXXXXXXXXXXXXXXXX>MIR172C/D       <---------ANAC58 --------->ANAC55(2) >>>>>>>>>LFY    --------->ANAC46--------->ATERF1(1)       <---------ANAC58<---------LBD16  <--------   ctgtgcttaaggagcttatacagaacgctgatgacgccggagctactaaagtccgtctctgtcttgaccggcgggttcacgggtcgggttctttgctttc  7758500                                                                                  --------->LBD16                                                                                 <---------HSFB2a(2)                                                                                <---------LBD16                                                                            <---------ARR11(3)                                                                            <---------ARR14(2)                                                                       <---------MYB52(1)                                                                      --------->TOE2(3)                                                                     <---------ANAC58                                                                     <---------ANAC58                                                                  <---------GLK1(1)                                                                  --------->GLK1(1)                                           --------->YAB1        <---------ARR14(2)    <---------AtMYB61   <----------DOF2                 <---------ANAC58              --------->ARR14(2) <---------GLK1(2) ---DOF2                           <---------ANAC58             <------ZmHOX2a(1)--------->HSFB2a(2) -ANAC58                ------>ZmHOX2a(1) <---------ATHB12--------->ZAT14   --------->ARR11(3) -ANAC58            <---------ARR11(3)    --------->ICU4  <---------ZAT14   --------->ARR14(2)   ggactctttggctcagtggcaaggtccttctctattggcttacaatgatgctgttttcactgaagaggatttcgttagtatctccagaattggtggaagt  7758600                                                                        <---------MYB52(1)                                                             <---------DAG2       <---------ANAC58                                                   ------>ZmHOX2a(1)   <-------GAMYB     <---------YAB1            --------->ZAT2                        <---------ANAC58 <-----------GT1<---------ANAC46 <-            <---------ZAT2                  <---------YAB1   <----------DOF2  <---------ANAC58     --        --------->WRKY18(1)              --------->ICU4 <-----------HVH21     <---------ANAC58     --   --------->YAB1                 <---------ANAC46<---------ANAC58<-----------GT1 <---------ANAC58 <-   ggcaaacatggtcaagcttggaagactggtcgatttgggtataattttgattccttactgtcactttttttcccgttgtttcttgcttatgaagatagca  7758700                               --------->TOE2(3)                    <-------GAMYB                <---------ANAC55(2)                <---------ANAC46                --------->ANAC55(2)           <---------------AtSPL8                                                          <------MYB83 --------ZAT18  <---------ANAC58                                                           <------MYB46(1) ------->ARR14(2)  <---------MYB46(3)      --------->ANAC55(2)                          <-------GAMYB ------->ZAT14  <---------ANAC58           <---------ANAC55(2)                   <---------YAB1 --------ZAT14 <-------TEIL --------->WOX13(1)          <---------YAB1    <----------DOF2<--------P   gtatacttcttaagaagtacgtggttgagtcaatctcagtgtgttacatatttgttttctgataaaaatgttctgactttggtattatagggttggcttc  7758800  Previous    Next  AGI:  At5g23110.1    Description:  zinc finger (C3HC4-type RING finger) family protein. similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT1G73950.1); similar to H0103C06.6 [Oryza sativa (indica cultivar-group)] (GB:CAJ86102.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ69545.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42019.1); contains InterPro domain ATP-binding region, ATPase-like; (InterPro:IPR003594); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 7758310    to: 7775674    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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